Ion I. Mandoiu

2009
72	EE	Ion I. Mandoiu, Giri Narasimhan, Yanqing Zhang: Bioinformatics Research and Applications, 5th International Symposium, ISBRA 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings Springer 2009
71	EE	Ion I. Mandoiu: Genotype and Haplotype Reconstruction from Low-Coverage Short Sequencing Reads. BICoB 2009: 52-53
70	EE	Bogdan Pasaniuc, Justin Kennedy, Ion I. Mandoiu: Imputation-Based Local Ancestry Inference in Admixed Populations. ISBRA 2009: 221-233
2008
69		Ion I. Mandoiu, Andrew A. Kennings: The Tenth International Workshop on System-Level Interconnect Prediction (SLIP 2008), Newcastle, UK, April 5-8, 2008, Proceedings ACM 2008
68		Ion I. Mandoiu, Raj Sunderraman, Alexander Zelikovsky: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings Springer 2008
67	EE	Bhaskar DasGupta, Jin Jun, Ion I. Mandoiu: Primer Selection Methods for Detection of Genomic Inversions and Deletions via PAMP. APBC 2008: 353-362
66	EE	Sudha Balla, Sanguthevar Rajasekaran, Ion I. Mandoiu: Faster greedy algorithms for Multiple Degenerate Primer Selection. BIBE 2008: 1-4
65	EE	Jin Jun, Paul Ryvkin, Edward Hemphill, Ion I. Mandoiu, Craig Nelson: Estimating the Relative Contributions of New Genes from Retrotransposition and Segmental Duplication Events during Mammalian Evolution. RECOMB-CG 2008: 40-54
64	EE	Alexander Gusev, Ion I. Mandoiu, Bogdan Pasaniuc: Highly Scalable Genotype Phasing by Entropy Minimization. IEEE/ACM Trans. Comput. Biology Bioinform. 5(2): 252-261 (2008)
63	EE	Ion I. Mandoiu, Yi Pan, Alexander Zelikovsky: Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. IEEE/ACM Trans. Comput. Biology Bioinform. 5(3): 321-322 (2008)
62	EE	Justin Kennedy, Ion I. Mandoiu, Bogdan Pasaniuc: Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity. Journal of Computational Biology 15(9): 1155-1171 (2008)
2007
61		Andrew A. Kennings, Ion I. Mandoiu: The Ninth International Workshop on System-Level Interconnect Prediction (SLIP 2007), Austin, Texas, USA, March 17-18, 2007, Proceedings ACM 2007
60		Ion I. Mandoiu, Alexander Zelikovsky: Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings Springer 2007
59	EE	Justin Kennedy, Ion I. Mandoiu, Bogdan Pasaniuc: Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity. WABI 2007: 73-84
58	EE	Andrew B. Kahng, Ion I. Mandoiu, Xu Xu, Alexander Zelikovsky: Enhanced Design Flow and Optimizations for Multiproject Wafers. IEEE Trans. on CAD of Integrated Circuits and Systems 26(2): 301-311 (2007)
57	EE	Ion I. Mandoiu, Yi Pan, Alexander Zelikovsky: Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. IEEE/ACM Trans. Comput. Biology Bioinform. 4(4): 513-514 (2007)
56	EE	Sudha Balla, Sanguthevar Rajasekaran, Ion I. Mandoiu: Efficient Algorithms for degenerate Primer Search. Int. J. Found. Comput. Sci. 18(4): 899-910 (2007)
55	EE	Gruia Calinescu, Ion I. Mandoiu, Alexander Zelikovsky, Marius Zimand: Selected Papers from the 1st ACIS International Workshop on Self-Assembling Wireless Networks. J. UCS 13(1): 1-3 (2007)
2006
54	EE	Ion I. Mandoiu, Claudia Prajescu: High-Throughput SNP Genotyping by SBE/SBH. International Conference on Computational Science (2) 2006: 742-749
53	EE	Mohammad Taghi Hajiaghayi, Kamal Jain, Lap Chi Lau, Ion I. Mandoiu, Alexander Russell, Vijay V. Vazirani: Minimum Multicolored Subgraph Problem in Multiplex PCR Primer Set Selection and Population Haplotyping. International Conference on Computational Science (2) 2006: 758-766
52	EE	Andrew B. Kahng, Ion I. Mandoiu, Sherief Reda, Xu Xu, Alexander Zelikovsky: Computer-Aided Optimization of DNA Array Design and Manufacturing. IEEE Trans. on CAD of Integrated Circuits and Systems 25(2): 305-320 (2006)
51	EE	Ion I. Mandoiu, Dragos Trinca: Exact and Approximation Algorithms for DNA Tag Set Design. Journal of Computational Biology 13(3): 732-744 (2006)
50	EE	Ernst Althaus, Gruia Calinescu, Ion I. Mandoiu, Sushil K. Prasad, N. Tchervenski, Alexander Zelikovsky: Power Efficient Range Assignment for Symmetric Connectivity in Static Ad Hoc Wireless Networks. Wireless Networks 12(3): 287-299 (2006)
2005
49	EE	Kishori M. Konwar, Ion I. Mandoiu, Alexander Russell, Alexander A. Shvartsman: Improved algorithms for multiplex PCR primer set selection with amplification length constraints. APBC 2005: 41-50
48	EE	Ion I. Mandoiu, Dragos Trinca: Exact and Approximation Algorithms for DNA Tag Set Design. CPM 2005: 383-393
47	EE	Bhaskar DasGupta, Kishori M. Konwar, Ion I. Mandoiu, Alexander A. Shvartsman: Highly Scalable Algorithms for Robust String Barcoding. International Conference on Computational Science (2) 2005: 1020-1028
46	EE	Ion I. Mandoiu, Claudia Prajescu, Dragos Trinca: Improved Tag Set Design and Multiplexing Algorithms for Universal Arrays. International Conference on Computational Science (2) 2005: 994-1002
45	EE	Marek Karpinski, Ion I. Mandoiu, Alexander Olshevsky, Alexander Zelikovsky: Improved Approximation Algorithms for the Quality of Service Multicast Tree Problem. Algorithmica 42(2): 109-120 (2005)
44	EE	Bhaskar DasGupta, Kishori M. Konwar, Ion I. Mandoiu, Alexander A. Shvartsman: DNA-BAR: distinguisher selection for DNA barcoding. Bioinformatics 21(16): 3424-3426 (2005)
43	EE	Ion I. Mandoiu, Claudia Prajescu, Dragos Trinca: Improved Tag Set Design and Multiplexing Algorithms for Universal Arrays CoRR abs/cs/0502054: (2005)
42	EE	Bhaskar DasGupta, Kishori M. Konwar, Ion I. Mandoiu, Alexander A. Shvartsman: Highly Scalable Algorithms for Robust String Barcoding CoRR abs/cs/0502065: (2005)
41	EE	Ion I. Mandoiu, Dragos Trinca: Exact and Approximation Algorithms for DNA Tag Set Design CoRR abs/cs/0503057: (2005)
40	EE	Christoph Albrecht, Andrew B. Kahng, Ion I. Mandoiu, Alexander Zelikovsky: Multicommodity Flow Algorithms for Buffered Global Routing CoRR abs/cs/0508045: (2005)
39	EE	Ion I. Mandoiu, Claudia Prajescu: High-Throughput SNP Genotyping by SBE/SBH CoRR abs/cs/0512052: (2005)
38	EE	Hongyu Chen, Chung-Kuan Cheng, Andrew B. Kahng, Ion I. Mandoiu, Qinke Wang, Bo Yao: The Y architecture for on-chip interconnect: analysis and methodology. IEEE Trans. on CAD of Integrated Circuits and Systems 24(4): 588-599 (2005)
37	EE	Puneet Gupta, Andrew B. Kahng, Ion I. Mandoiu, Puneet Sharma: Layout-aware scan chain synthesis for improved path delay fault coverage. IEEE Trans. on CAD of Integrated Circuits and Systems 24(7): 1104-1114 (2005)
36	EE	Bhaskar DasGupta, Kishori M. Konwar, Ion I. Mandoiu, Alexander A. Shvartsman: Highly scalable algorithms for robust string barcoding. IJBRA 1(2): 145-161 (2005)
35	EE	Ion I. Mandoiu, Claudia Prajescu, Dragos Trinca: Improved Tag Set Design and Multiplexing Algorithms for Universal Arrays. T. Comp. Sys. Biology 2: 124-137 (2005)
2004
34	EE	Andrew B. Kahng, Ion I. Mandoiu, Qinke Wang, Xu Xu, Alexander Zelikovsky: Multi-project reticle floorplanning and wafer dicing. ISPD 2004: 70-77
33	EE	Kishori M. Konwar, Ion I. Mandoiu, Alexander Russell, Alexander A. Shvartsman: Approximation Algorithms for Minimum PCR Primer Set Selection with Amplification Length and Uniqueness Constraints CoRR cs.DS/0406053: (2004)
32	EE	Andrew B. Kahng, Bao Liu, Ion I. Mandoiu: Nontree routing for reliability and yield improvement [IC layout]. IEEE Trans. on CAD of Integrated Circuits and Systems 23(1): 148-156 (2004)
31	EE	Andrew B. Kahng, Ion I. Mandoiu, Pavel A. Pevzner, Sherief Reda, Alexander Zelikovsky: Scalable Heuristics for Design of DNA Probe Arrays. Journal of Computational Biology 11(2/3): 429-447 (2004)
30	EE	Gruia Calinescu, Ion I. Mandoiu, Peng-Jun Wan, Alexander Zelikovsky: Selecting Forwarding Neighbors in Wireless Ad Hoc Networks. MONET 9(2): 101-111 (2004)
2003
29	EE	Hongyu Chen, Chung-Kuan Cheng, Andrew B. Kahng, Ion I. Mandoiu, Qinke Wang, Bo Yao: The Y-Architecture for On-Chip Interconnect: Analysis and Methodology. ICCAD 2003: 13-20
28	EE	Andrew B. Kahng, Ion I. Mandoiu, Sherief Reda, Xu Xu, Alexander Zelikovsky: Evaluation of Placement Techniques for DNA Probe Array Layout. ICCAD 2003: 262-269
27	EE	Puneet Gupta, Andrew B. Kahng, Ion I. Mandoiu, Puneet Sharma: Layout-Aware Scan Chain Synthesis for Improved Path Delay Fault Coverage. ICCAD 2003: 754-759
26	EE	Andrew B. Kahng, Ion I. Mandoiu, Sherief Reda, Xu Xu, Alexander Zelikovsky: Design Flow Enhancements for DNA Arrays. ICCD 2003: 116-
25	EE	Andrew B. Kahng, Ion I. Mandoiu, Pavel A. Pevzner, Sherief Reda, Alexander Zelikovsky: Engineering a scalable placement heuristic for DNA probe arrays. RECOMB 2003: 148-156
24	EE	Hongyu Chen, Chung-Kuan Cheng, Andrew B. Kahng, Ion I. Mandoiu, Qinke Wang: Estimation of wirelength reduction for lambda-geometry vs. manhattan placement and routing. SLIP 2003: 71-76
23	EE	Marek Karpinski, Ion I. Mandoiu, Alexander Olshevsky, Alexander Zelikovsky: Improved Approximation Algorithms for the Quality of Service Steiner Tree Problem. WADS 2003: 401-411
22	EE	Charles J. Alpert, Andrew B. Kahng, Bao Liu, Ion I. Mandoiu, Alexander Zelikovsky: Minimum buffered routing with bounded capacitive load for slew rate and reliability control. IEEE Trans. on CAD of Integrated Circuits and Systems 22(3): 241-253 (2003)
21	EE	Christoph Albrecht, Andrew B. Kahng, Bao Liu, Ion I. Mandoiu, Alexander Zelikovsky: On the skew-bounded minimum-buffer routing tree problem. IEEE Trans. on CAD of Integrated Circuits and Systems 22(7): 937-945 (2003)
2002
20	EE	Andrew B. Kahng, Bao Liu, Ion I. Mandoiu: Non-tree routing for reliability and yield improvement. ICCAD 2002: 260-266
19		Gruia Calinescu, Ion I. Mandoiu, Alexander Zelikovsky: Symmetric Connectivity with Minimum Power Consumption in Radio Networks. IFIP TCS 2002: 119-130
18		C. Bandela, Yu Chen, Andrew B. Kahng, Ion I. Mandoiu, Alexander Zelikovsky: Auctions with Buyer Preferences. Information Systems: The e-Business Challenge 2002: 223-238
17	EE	Christoph Albrecht, Andrew B. Kahng, Ion I. Mandoiu, Alexander Zelikovsky: Floorplan Evaluation with Timing-Driven Global Wireplanning, Pin Assignment and Buffer/Wire Sizing. VLSI Design 2002: 580-
16	EE	Andrew B. Kahng, Ion I. Mandoiu, Pavel A. Pevzner, Sherief Reda, Alexander Zelikovsky: Border Length Minimization in DNA Array Design. WABI 2002: 435-448
15	EE	Feodor F. Dragan, Andrew B. Kahng, Ion I. Mandoiu, Sudhakar Muddu, Alexander Zelikovsky: Provably good global buffering by generalized multiterminalmulticommodity flow approximation. IEEE Trans. on CAD of Integrated Circuits and Systems 21(3): 263-274 (2002)
14	EE	Kamal Jain, Ion I. Mandoiu, Vijay V. Vazirani, David P. Williamson: A primal-dual schema based approximation algorithm for the element connectivity problem. J. Algorithms 45(1): 1-15 (2002)
2001
13	EE	Feodor F. Dragan, Andrew B. Kahng, Ion I. Mandoiu, Sudhakar Muddu, Alexander Zelikovsky: Provably good global buffering by multi-terminal multicommodity flow approximation. ASP-DAC 2001: 120-125
12	EE	Gruia Calinescu, Ion I. Mandoiu, Peng-Jun Wan, Alexander Zelikovsky: Selecting forwarding neighbors in wireless Ad Hoc networks. DIAL-M 2001: 34-43
11	EE	Charles J. Alpert, Andrew B. Kahng, Bao Liu, Ion I. Mandoiu, Alexander Zelikovsky: Minimum-Buffered Routing of Non-Critical Nets for Slew Rate and Reliability Control. ICCAD 2001: 408-
10	EE	Alexander Zelikovsky, Ion I. Mandoiu: Practical approximation algorithms for zero- and bounded-skew trees. SODA 2001: 407-416
9	EE	Feodor F. Dragan, Andrew B. Kahng, Ion I. Mandoiu, Sudhakar Muddu, Alexander Zelikovsky: Practical Approximation Algorithms for Separable Packing Linear Programs. WADS 2001: 325-337
8	EE	Alexander Zelikovsky, Ion I. Mandoiu: Practical Approximation Algorithms for Zero- and Bounded-Skew Trees. SIAM J. Discrete Math. 15(1): 97-111 (2001)
2000
7		Feodor F. Dragan, Andrew B. Kahng, Ion I. Mandoiu, Sudhakar Muddu, Alexander Zelikovsky: Provably Good Global Buffering Using an Available Buffer Block Plan. ICCAD 2000: 104-109
6	EE	Ion I. Mandoiu, Vijay V. Vazirani, Joseph L. Ganley: A new heuristic for rectilinear Steiner trees. IEEE Trans. on CAD of Integrated Circuits and Systems 19(10): 1129-1139 (2000)
5	EE	Ion I. Mandoiu, Alexander Zelikovsky: A note on the MST heuristic for bounded edge-length Steiner trees with minimum number of Steiner points. Inf. Process. Lett. 75(4): 165-167 (2000)
1999
4	EE	Ion I. Mandoiu, Vijay V. Vazirani, Joseph L. Ganley: A new heuristic for rectilinear Steiner trees. ICCAD 1999: 157-162
3	EE	Kamal Jain, Ion I. Mandoiu, Vijay V. Vazirani, David P. Williamson: A Primal-Dual Schema Based Approximation Algorithm for the Element Connectivity Problem. SODA 1999: 484-489
1998
2		Kamal Jain, Ion I. Mandoiu, Vijay V. Vazirani: The 'Art of Trellis Decoding' Is Computationally Hardi - For Large Fields. IEEE Transactions on Information Theory 44(3): 1211-1214 (1998)
1	EE	Ion I. Mandoiu: Optimum Extensions of Prefix Codes. Inf. Process. Lett. 66(1): 35-40 (1998)

Coauthor Index

1	Christoph Albrecht	[17] [21] [40]
2	Charles J. Alpert	[11] [22]
3	Ernst Althaus	[50]
4	Sudha Balla	[56] [66]
5	C. Bandela	[18]
6	Gruia Calinescu	[12] [19] [30] [50] [55]
7	Hongyu Chen	[24] [29] [38]
8	Yu Chen	[18]
9	Chung-Kuan Cheng	[24] [29] [38]
10	Bhaskar DasGupta	[36] [42] [44] [47] [67]
11	Feodor F. Dragan	[7] [9] [13] [15]
12	Joseph L. Ganley	[4] [6]
13	Puneet Gupta	[27] [37]
14	Alexander Gusev	[64]
15	Mohammad Taghi Hajiaghayi (MohammadTaghi Hajiaghayi)	[53]
16	Edward Hemphill	[65]
17	Kamal Jain	[2] [3] [14] [53]
18	Jin Jun	[65] [67]
19	Andrew B. Kahng	[7] [9] [11] [13] [15] [16] [17] [18] [20] [21] [22] [24] [25] [26] [27] [28] [29] [31] [32] [34] [37] [38] [40] [52] [58]
20	Marek Karpinski	[23] [45]
21	Justin Kennedy	[59] [62] [70]
22	Andrew A. Kennings	[61] [69]
23	Kishori M. Konwar	[33] [36] [42] [44] [47] [49]
24	Lap Chi Lau	[53]
25	Bao Liu	[11] [20] [21] [22] [32]
26	Sudhakar Muddu	[7] [9] [13] [15]
27	Giri Narasimhan	[72]
28	Craig Nelson	[65]
29	Alexander Olshevsky	[23] [45]
30	Yi Pan	[57] [63]
31	Bogdan Pasaniuc	[59] [62] [64] [70]
32	Pavel A. Pevzner	[16] [25] [31]
33	Claudia Prajescu	[35] [39] [43] [46] [54]
34	Sushil K. Prasad	[50]
35	Sanguthevar Rajasekaran	[56] [66]
36	Sherief Reda	[16] [25] [26] [28] [31] [52]
37	Alexander Russell	[33] [49] [53]
38	Paul Ryvkin	[65]
39	Puneet Sharma	[27] [37]
40	Alexander A. Shvartsman	[33] [36] [42] [44] [47] [49]
41	Rajshekhar Sunderraman (Raj Sunderraman)	[68]
42	N. Tchervenski	[50]
43	Dragos Trinca	[35] [41] [43] [46] [48] [51]
44	Vijay V. Vazirani	[2] [3] [4] [6] [14] [53]
45	Peng-Jun Wan	[12] [30]
46	Qinke Wang	[24] [29] [34] [38]
47	David P. Williamson	[3] [14]
48	Xu Xu	[26] [28] [34] [52] [58]
49	Bo Yao	[29] [38]
50	Alexander Zelikovsky	[5] [7] [8] [9] [10] [11] [12] [13] [15] [16] [17] [18] [19] [21] [22] [23] [25] [26] [28] [30] [31] [34] [40] [45] [50] [52] [55] [57] [58] [60] [63] [68]
51	Yanqing Zhang (Yan-Qing Zhang)	[72]
52	Marius Zimand	[55]

Colors in the list of coauthors