11. ISMB 2003:
Brisbane,
Australia (Supplement of Bioinformatics)
Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29 - July 3, 2003, Brisbane, Australia.
2003 BibTeX
@proceedings{DBLP:conf/ismb/2003,
title = {Proceedings of the Eleventh International Conference on Intelligent
Systems for Molecular Biology, June 29 - July 3, 2003, Brisbane,
Australia},
booktitle = {ISMB (Supplement of Bioinformatics)},
year = {2003},
bibsource = {DBLP, http://dblp.uni-trier.de}
}
Editorial
Original Papers
- Lars Arvestad, Ann-Charlotte Berglund, Jens Lagergren, Bengt Sennblad:
Bayesian gene/species tree reconciliation and orthology analysis using MCMC.
7-15
Electronic Edition (link) BibTeX
- Niko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig:
Methods for optimizing antiviral combination therapies.
16-25
Electronic Edition (link) BibTeX
- Asa Ben-Hur, Douglas L. Brutlag:
Remote homology detection: a motif based approach.
26-33
Electronic Edition (link) BibTeX
- Joseph Bockhorst, Yu Qiu, Jeremy D. Glasner, Mingzhu Liu, Frederick R. Blattner, Mark Craven:
Predicting bacterial transcription units using sequence and expression data.
34-43
Electronic Edition (link) BibTeX
- Sebastian Böcker:
SNP and mutation discovery using base-specific cleavage and MALDI-TOF mass spectrometry.
44-53
Electronic Edition (link) BibTeX
- Michael Brudno, Sanket Malde, Alexander Poliakov, Chuong B. Do, Olivier Couronne, Inna Dubchak, Serafim Batzoglou:
Glocal alignment: finding rearrangements during alignment.
54-62
Electronic Edition (link) BibTeX
- Richard M. Bruskiewich, Alexander B. Cosico, William Eusebio, Arllet M. Portugal, Luralyn M. Ramos, Ma. Teresa Reyes, May Ann B. Sallan, Victor Jun M. Ulat, Xusheng Wang, Kenneth L. McNally, Ruaraidh Sackville Hamilton, Christopher Graham McLaren:
Linking genotype to phenotype: the International Rice Information System (IRIS).
63-65
Electronic Edition (link) BibTeX
- Liming Cai, Russell L. Malmberg, Yunzhou Wu:
Stochastic modeling of RNA pseudoknotted structures: a grammatical approach.
66-73
Electronic Edition (link) BibTeX
- Peter P. Calabrese, Sugata Chakravarty, Todd J. Vision:
Fast identification and statistical evaluation of segmental homologies in comparative maps.
74-80
Electronic Edition (link) BibTeX
- Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh:
PSI: indexing protein structures for fast similarity search.
81-83
Electronic Edition (link) BibTeX
- Jung Kyoon Choi, Ungsik Yu, Sangsoo Kim, Ook Joon Yoo:
Combining multiple microarray studies and modeling interstudy variation.
84-90
Electronic Edition (link) BibTeX
- Pavel B. Dobrokhotov, Cyril Goutte, Anne-Lise Veuthey, Éric Gaussier:
Combining NLP and probabilistic categorisation for document and term selection for Swiss-Prot medical annotation.
91-94
Electronic Edition (link) BibTeX
- Oranit Dror, Hadar Benyamini, Ruth Nussinov, Haim J. Wolfson:
MASS: multiple structural alignment by secondary structures.
95-104
Electronic Edition (link) BibTeX
- François Enault, Karsten Suhre, Chantal Abergel, Olivier Poirot, Jean-Michel Claverie:
Annotation of bacterial genomes using improved phylogenomic profiles.
105-107
Electronic Edition (link) BibTeX
- Irit Gat-Viks, Ron Shamir:
Chain functions and scoring functions in genetic networks.
108-117
Electronic Edition (link) BibTeX
- Richard E. Green, Benjamin P. Lewis, R. Tyler Hillman, Marco Blanchette, Liana F. Lareau, Aaron T. Garnett, Donald C. Rio, Steven E. Brenner:
Widespread predicted nonsense-mediated mRNA decay of alternatively-spliced transcripts of human normal and disease genes.
118-121
Electronic Edition (link) BibTeX
- Eran Halperin, Jeremy Buhler, Richard M. Karp, Robert Krauthgamer, Ben Westover:
Detecting protein sequence conservation via metric embeddings.
122-129
Electronic Edition (link) BibTeX
- Andreas Heger, Liisa Holm:
Sensitive pattern discovery with 'fuzzy' alignments of distantly related proteins.
130-137
Electronic Edition (link) BibTeX
- Maureen Heymans, Ambuj K. Singh:
Deriving phylogenetic trees from the similarity analysis of metabolic pathways.
138-146
Electronic Edition (link) BibTeX
- I. Holmes:
Using guide trees to construct multiple-sequence evolutionary HMMs.
147-157
Electronic Edition (link) BibTeX
- Yuval Inbar, Hadar Benyamini, Ruth Nussinov, Haim J. Wolfson:
Protein structure prediction via combinatorial assembly of sub-structural units.
158-168
Electronic Edition (link) BibTeX
- Öjvind Johansson, Wynand Alkema, Wyeth W. Wasserman, Jens Lagergren:
Identification of functional clusters of transcription factor binding motifs in genome sequences: the MSCAN algorithm.
169-176
Electronic Edition (link) BibTeX
- Byong-Hyon Ju, Kyungsook Han:
Complexity management in visualizing protein interaction networks.
177-179
Electronic Edition (link) BibTeX
- Jin-Dong Kim, Tomoko Ohta, Yuka Tateisi, Jun-ichi Tsujii:
GENIA corpus - a semantically annotated corpus for bio-textmining.
180-182
Electronic Edition (link) BibTeX
- Oliver D. King, Jeffrey C. Lee, Aimee M. Dudley, Daniel M. Janse, George M. Church, Frederick P. Roth:
Predicting phenotype from patterns of annotation.
183-189
Electronic Edition (link) BibTeX
- Jean-François Lefebvre, Nadia El-Mabrouk, Elisabeth R. M. Tillier, David Sankoff:
Detection and validation of single gene inversions.
190-196
Electronic Edition (link) BibTeX
- Stanley Letovsky, Simon Kasif:
Predicting protein function from protein/protein interaction data: a probabilistic approach.
197-204
Electronic Edition (link) BibTeX
- Pier Luigi Martelli, Piero Fariselli, Rita Casadio:
An ENSEMBLE machine learning approach for the prediction of all-alpha membrane proteins.
205-211
Electronic Edition (link) BibTeX
- Thomas M. Oinn:
Talisman - rapid application development for the grid.
212-214
Electronic Edition (link) BibTeX
- Orla O'Sullivan, Mark Zehnder, Desmond G. Higgins, Philipp Bucher, Aurelien Grosdidier, Cédric Notredame:
APDB: a novel measure for benchmarking sequence alignment methods without reference alignments.
215-221
Electronic Edition (link) BibTeX
- Naomi Rosen, Vered Chalifa-Caspi, Orit Shmueli, Avital Adato, Michal Lapidot, Julie Stampnitzky, Marilyn Safran, Doron Lancet:
GeneLoc: exon-based integration of human genome maps.
222-224
Electronic Edition (link) BibTeX
- Anthony Rowe, Dimitrios Kalaitzopoulos, Michelle Osmond, Moustafa Ghanem, Yike Guo:
The discovery net system for high throughput bioinformatics.
225-231
Electronic Edition (link) BibTeX
- Yasubumi Sakakibara:
Pair hidden Markov models on tree structures.
232-240
Electronic Edition (link) BibTeX
- Maria Samsonova, Andrei Pisarev, Maxim Blagov:
Processing of natural language queries to a relational database.
241-249
Electronic Edition (link) BibTeX
- Victor Santander, Miguel Angel Portales, Francisco Melo:
A tool to assist the study of specific features at protein binding sites.
250-251
Electronic Edition (link) BibTeX
- Joanna M. Sasin, Michal A. Kurowski, Janusz M. Bujnicki:
STRUCLA: a WWW meta-server for protein structure comparison and evolutionary classification.
252-254
Electronic Edition (link) BibTeX
- Alexander Schliep, Alexander Schönhuth, Christine Steinhoff:
Using hidden Markov models to analyze gene expression time course data.
255-263
Electronic Edition (link) BibTeX
- Eran Segal, Haidong Wang, Daphne Koller:
Discovering molecular pathways from protein interaction and gene expression data.
264-272
Electronic Edition (link) BibTeX
- Eran Segal, R. Yelensky, Daphne Koller:
Genome-wide discovery of transcriptional modules from DNA sequence and gene expression.
273-282
Electronic Edition (link) BibTeX
- Roded Sharan, Ivan Ovcharenko, Asa Ben-Hur, Richard M. Karp:
CREME: a framework for identifying cis-regulatory modules in human-mouse conserved segments.
283-291
Electronic Edition (link) BibTeX
- Saurabh Sinha, Erik van Nimwegen, Eric D. Siggia:
A probabilistic method to detect regulatory modules.
292-301
Electronic Edition (link) BibTeX
- Robert D. Stevens, Alan J. Robinson, Carole A. Goble:
myGrid: personalised bioinformatics on the information grid.
302-304
Electronic Edition (link) BibTeX
- Jijun Tang, Bernard M. E. Moret:
Scaling up accurate phylogenetic reconstruction from gene-order data.
305-312
Electronic Edition (link) BibTeX
- Tatiana Tatarinova, Vyacheslav Brover, Maxim Troukhan, Nickolai Alexandrov:
Skew in CG content near the transcription start site in Arabidopsis thaliana.
313-314
Electronic Edition (link) BibTeX
- Hui Wang, Earl Hubbell, Jing-Shan Hu, Gangwu Mei, Melissa S. Cline, Gang Lu, Tyson Clark, Michael A. Siani-Rose, Manuel Ares, David Kulp, David Haussler:
Gene structure-based splice variant deconvolution using a microarry platform.
315-322
Electronic Edition (link) BibTeX
- Yoshihiro Yamanishi, Jean-Philippe Vert, A. Nakaya, Minoru Kanehisa:
Extraction of correlated gene clusters from multiple genomic data by generalized kernel canonical correlation analysis.
323-330
Electronic Edition (link) BibTeX
- Alexander S. Yeh, Lynette Hirschman, Alexander A. Morgan:
Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup.
331-339
Electronic Edition (link) BibTeX
- Hong Yu, Eugene Agichtein:
Extracting synonymous gene and protein terms from biological literature.
340-349
Electronic Edition (link) BibTeX
Copyright © Sat May 16 23:25:46 2009
by Michael Ley (ley@uni-trier.de)
