Desmond G. Higgins

2008
25	EE	Gordon Blackshields, Mark Larkin, Iain M. Wallace, Andreas Wilm, Desmond G. Higgins: Fast embedding methods for clustering tens of thousands of sequences. Computational Biology and Chemistry 32(4): 282-286 (2008)
2007
24	EE	M. A. Larkin, Gordon Blackshields, N. P. Brown, R. Chenna, Paul A. McGettigan, Hamish McWilliam, Franck Valentin, Iain M. Wallace, Andreas Wilm, Rodrigo Lopez, Julie Dawn Thompson, Toby J. Gibson, Desmond G. Higgins: Clustal W and Clustal X version 2.0. Bioinformatics 23(21): 2947-2948 (2007)
23	EE	Ian B. Jeffery, Stephen F. Madden, Paul A. McGettigan, Guy Perrière, Aedín C. Culhane, Desmond G. Higgins: Integrating transcription factor binding site information with gene expression datasets. Bioinformatics 23(3): 298-305 (2007)
22	EE	Sébastien Moretti, Fabrice Armougom, Iain M. Wallace, Desmond G. Higgins, C. Victor Jongeneel, Cédric Notredame: The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods. Nucleic Acids Research 35(Web-Server-Issue): 645-648 (2007)
2006
21	EE	Fabrice Armougom, Olivier Poirot, Sébastien Moretti, Desmond G. Higgins, Phillip Bucher, Vladimir Keduas, Cédric Notredame: APDB: a web server to evaluate the accuracy of sequence alignments using structural information. Bioinformatics 22(19): 2439-2440 (2006)
2005
20	EE	Aedín C. Culhane, Jean Thioulouse, Guy Perrière, Desmond G. Higgins: MADE4: an R package for multivariate analysis of gene expression data. Bioinformatics 21(11): 2789-2790 (2005)
19	EE	Iain M. Wallace, Orla O'Sullivan, Desmond G. Higgins: Evaluation of iterative alignment algorithms for multiple alignment. Bioinformatics 21(8): 1408-1414 (2005)
2003
18	EE	Steven David Prestwich, Desmond G. Higgins, Orla O'Sullivan: A SAT-Based Approach to Multiple Sequence Alignment. CP 2003: 940-944
17	EE	Orla O'Sullivan, Mark Zehnder, Desmond G. Higgins, Philipp Bucher, Aurelien Grosdidier, Cédric Notredame: APDB: a novel measure for benchmarking sequence alignment methods without reference alignments. ISMB (Supplement of Bioinformatics) 2003: 215-221
16	EE	Aedín C. Culhane, Guy Perrière, Desmond G. Higgins: Cross-platform comparison and visualisation of gene expression data using co-inertia analysis. BMC Bioinformatics 4: 59 (2003)
15		Chenna Ramu, Hideaki Sugawara, Tadashi Koike, Rodrigo Lopez, Toby J. Gibson, Desmond G. Higgins, Julie Dawn Thompson: Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Research 31(13): 3497-3500 (2003)
2002
14		Aedín C. Culhane, Guy Perrière, Elizabeth C. Considine, Thomas G. Cotter, Desmond G. Higgins: Between-group analysis of microarray data. Bioinformatics 18(12): 1600-1608 (2002)
1999
13		P. Thebault, P. Monestie, A. McGrath, Desmond G. Higgins: MIAH: automatic alignment of eukaryotic SSU rRNAs. Bioinformatics 15(4): 341-342 (1999)
1998
12		Emmet A. O'Brien, Desmond G. Higgins: Empirical estimation of the reliability of ribosomal RNA alignments. Bioinformatics 14(10): 830-838 (1998)
11		Emmet A. O'Brien, Cédric Notredame, Desmond G. Higgins: Optimization of ribosomal RNA profile alignments. Bioinformatics 14(4): 332-341 (1998)
10		Cédric Notredame, Liisa Holm, Desmond G. Higgins: COFFEE: an objective function for multiple sequence alignments. Bioinformatics 14(5): 407-422 (1998)
1994
9		Julie Dawn Thompson, Desmond G. Higgins, Toby J. Gibson: Improved sensitivity of profile searches through the use of sequence weights and gap excision. Computer Applications in the Biosciences 10(1): 19-29 (1994)
1993
8		Catherine M. Rice, Rainer Fuchs, Desmond G. Higgins, Peter Stoehr, Graham Cameron: The EMBL data library. Nucleic Acids Research 21(13): 2967-2971 (1993)
1992
7		Desmond G. Higgins: Sequence ordinations: a multivariate analysis approach to analysing large sequence data sets. Computer Applications in the Biosciences 8(1): 15-22 (1992)
6		Desmond G. Higgins, Peter Stoehr: EMBLSCAN: fast approximate DNA database searches on compact disc. Computer Applications in the Biosciences 8(2): 137-139 (1992)
5		Desmond G. Higgins, Alan J. Bleasby, Rainer Fuchs: CLUSTAL V: improved software for multiple sequence alignment. Computer Applications in the Biosciences 8(2): 189-191 (1992)
4		Denis C. Shields, Desmond G. Higgins, P. M. Sharp: GCWIND: a microcomputer program for identifying open reading frames according to codon positional G+C content. Computer Applications in the Biosciences 8(5): 521-523 (1992)
3		J. Heringa, H. Sommerfeldt, Desmond G. Higgins, P. Argos: OBSTRUCT: a program to obtain largest cliques from a protein sequence set according to structural resolution and sequence similarity. Computer Applications in the Biosciences 8(6): 599-600 (1992)
1989
2		Desmond G. Higgins, P. M. Sharp: Fast and sensitive multiple sequence alignments on a microcomputer. Computer Applications in the Biosciences 5(2): 151-153 (1989)
1987
1		Desmond G. Higgins, Manolo Gouy: Interfacing similarity search software with the sequence retrieval system ACNUC. Computer Applications in the Biosciences 3(3): 239-241 (1987)

Coauthor Index

1	P. Argos	[3]
2	Fabrice Armougom	[21] [22]
3	Gordon Blackshields	[24] [25]
4	Alan J. Bleasby	[5]
5	N. P. Brown	[24]
6	Philipp Bucher	[17]
7	Phillip Bucher	[21]
8	Graham Cameron	[8]
9	R. Chenna	[24]
10	Elizabeth C. Considine	[14]
11	Thomas G. Cotter	[14]
12	Aedín C. Culhane	[14] [16] [20] [23]
13	Rainer Fuchs	[5] [8]
14	Toby J. Gibson	[9] [15] [24]
15	Manolo Gouy	[1]
16	Aurelien Grosdidier	[17]
17	J. Heringa	[3]
18	Liisa Holm	[10]
19	Ian B. Jeffery	[23]
20	C. Victor Jongeneel	[22]
21	Vladimir Keduas	[21]
22	Tadashi Koike	[15]
23	M. A. Larkin	[24]
24	Mark Larkin	[25]
25	Rodrigo Lopez	[15] [24]
26	Stephen F. Madden	[23]
27	Paul A. McGettigan	[23] [24]
28	A. McGrath	[13]
29	Hamish McWilliam	[24]
30	P. Monestie	[13]
31	Sébastien Moretti	[21] [22]
32	Cédric Notredame	[10] [11] [17] [21] [22]
33	Emmet A. O'Brien	[11] [12]
34	Orla O'Sullivan	[17] [18] [19]
35	Guy Perrière	[14] [16] [20] [23]
36	Olivier Poirot	[21]
37	Steven David Prestwich	[18]
38	Chenna Ramu	[15]
39	Catherine M. Rice	[8]
40	P. M. Sharp	[2] [4]
41	Denis C. Shields	[4]
42	H. Sommerfeldt	[3]
43	Peter Stoehr	[6] [8]
44	Hideaki Sugawara	[15]
45	P. Thebault	[13]
46	Jean Thioulouse	[20]
47	Julie Dawn Thompson (Julie D. Thompson)	[9] [15] [24]
48	Franck Valentin	[24]
49	Iain M. Wallace	[19] [22] [24] [25]
50	Andreas Wilm	[24] [25]
51	Mark Zehnder	[17]

Colors in the list of coauthors