Michael Brudno

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19EESeunghak Lee, Elango Cheran, Michael Brudno: A robust framework for detecting structural variations in a genome. ISMB 2008: 59-67
18EEGerald Quon, Yee Whye Teh, Esther Chan, Timothy R. Hughes, Michael Brudno, Quaid Morris: A mixture model for the evolution of gene expression in non-homogeneous datasets. NIPS 2008: 1297-1304
17EEMichael Brudno, Bernard M. E. Moret, C. Randal Linder, Tandy Warnow: Session Introduction. Pacific Symposium on Biocomputing 2008: 1-2
16EEA. V. Dalca, Michael Brudno: FRESCO: Flexible Alignment with Rectangle Scoring Schemes. Pacific Symposium on Biocomputing 2008: 3-14
15EEPaul Medvedev, Michael Brudno: Ab Initio Whole Genome Shotgun Assembly with Mated Short Reads. RECOMB 2008: 50-64
14EEVladimir Yanovski, Stephen M. Rumble, Michael Brudno: Read Mapping Algorithms for Single Molecule Sequencing Data. WABI 2008: 38-49
13EEPaul Medvedev, Konstantinos Georgiou, Gene Myers, Michael Brudno: Computability of Models for Sequence Assembly. WABI 2007: 289-301
12EEMichael Brudno, Alexander Poliakov, Simon Minovitsky, Igor Ratnere, Inna Dubchak: Multiple whole genome alignments and novel biomedical applications at the VISTA portal. Nucleic Acids Research 35(Web-Server-Issue): 669-674 (2007)
11EEGalina Yu. Kovaleva, Georgii A. Bazykin, Michael Brudno, Mikhail S. Gelfand: Comparative Genomics of Transcriptional Regulation in Yeasts and its Application to Identification of a Candidate Alpha-isopropylmalate Transporter. J. Bioinformatics and Computational Biology 4(5): 981-998 (2006)
10 Chuong B. Do, Michael Brudno, Serafim Batzoglou: PROBCONS: Probabilistic Consistency-Based Multiple Alignment of Amino Acid Sequences. AAAI 2004: 703-708
9EEMukund Sundararajan, Michael Brudno, Kerrin Small, Arend Sidow, Serafim Batzoglou: Chaining Algorithms for Alignment of Draft Sequence. WABI 2004: 326-337
8EENameeta Shah, Olivier Couronne, Len A. Pennacchio, Michael Brudno, Serafim Batzoglou, E. Wes Bethel, Edward M. Rubin, Bernd Hamann, Inna Dubchak: Phylo-VISTA: interactive visualization of multiple DNA sequence alignments. Bioinformatics 20(5): 636-643 (2004)
7 Michael Brudno, Rasmus Steinkamp, Burkhard Morgenstern: The CHAOS/DIALIGN WWW server for multiple alignment of genomic sequences. Nucleic Acids Research 32(Web-Server-Issue): 41-44 (2004)
6EEMichael Brudno, Sanket Malde, Alexander Poliakov, Chuong B. Do, Olivier Couronne, Inna Dubchak, Serafim Batzoglou: Glocal alignment: finding rearrangements during alignment. ISMB (Supplement of Bioinformatics) 2003: 54-62
5EEMichael Brudno, Michael Chapman, Berthold Göttgens, Serafim Batzoglou, Burkhard Morgenstern: Fast and sensitive multiple alignment of large genomic sequences. BMC Bioinformatics 4: 66 (2003)
4 Leila Taher, Oliver Rinner, Saurabh Garg, Alexander Sczyrba, Michael Brudno, Serafim Batzoglou, Burkhard Morgenstern: AGenDA: homology-based gene prediction. Bioinformatics 19(12): 1575-1577 (2003)
3EEMichael Brudno, Burkhard Morgenstern: Fast and Sensitive Alignment of Large Genomic Sequences. CSB 2002: 138-
2 Chris Mayor, Michael Brudno, Jody R. Schwartz, Alexander Poliakov, Edward M. Rubin, Kelly A. Frazer, Lior Pachter, Inna Dubchak: VISTA : visualizing global DNA sequence alignments of arbitrary length. Bioinformatics 16(11): 1046-1047 (2000)
1 I. Dralyuk, Michael Brudno, Mikhail S. Gelfand, Manfred Zorn, Inna Dubchak: ASDB: database of alternatively spliced genes. Nucleic Acids Research 28(1): 296-297 (2000)

Coauthor Index

1Serafim Batzoglou [4] [5] [6] [8] [9] [10]
2Georgii A. Bazykin [11]
3E. Wes Bethel (Wes Bethel) [8]
4Esther Chan [18]
5Michael Chapman [5]
6Elango Cheran [19]
7Olivier Couronne [6] [8]
8A. V. Dalca [16]
9Chuong B. Do [6] [10]
10I. Dralyuk [1]
11Inna Dubchak [1] [2] [6] [8] [12]
12Kelly A. Frazer [2]
13Saurabh Garg [4]
14Mikhail S. Gelfand [1] [11]
15Konstantinos Georgiou [13]
16Berthold Göttgens [5]
17Bernd Hamann [8]
18Timothy R. Hughes [18]
19Galina Yu. Kovaleva [11]
20Seunghak Lee [19]
21C. Randal Linder [17]
22Sanket Malde [6]
23Chris Mayor [2]
24Paul Medvedev [13] [15]
25Simon Minovitsky [12]
26Bernard M. E. Moret [17]
27Burkhard Morgenstern [3] [4] [5] [7]
28Quaid Morris [18]
29Eugene W. Myers (Gene Myers) [13]
30Lior Pachter [2]
31Len A. Pennacchio [8]
32Alexander Poliakov [2] [6] [12]
33Gerald Quon [18]
34Igor Ratnere [12]
35Oliver Rinner [4]
36Edward M. Rubin [2] [8]
37Stephen M. Rumble [14]
38Jody R. Schwartz [2]
39Alexander Sczyrba [4]
40Nameeta Shah [8]
41Arend Sidow [9]
42Kerrin Small [9]
43Rasmus Steinkamp [7]
44Mukund Sundararajan [9]
45Leila Taher [4]
46Yee Whye Teh [18]
47Tandy Warnow [17]
48Vladimir Yanovski [14]
49Manfred Zorn [1]

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Copyright © Sun May 17 03:24:02 2009 by Michael Ley (ley@uni-trier.de)