2008 |
14 | EE | Tobias Rausch,
Anne-Katrin Emde,
David Weese,
Andreas Döring,
Cédric Notredame,
Knut Reinert:
Segment-based multiple sequence alignment.
ECCB 2008: 187-192 |
2007 |
13 | EE | Sébastien Moretti,
Fabrice Armougom,
Iain M. Wallace,
Desmond G. Higgins,
C. Victor Jongeneel,
Cédric Notredame:
The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods.
Nucleic Acids Research 35(Web-Server-Issue): 645-648 (2007) |
2006 |
12 | EE | Fabrice Armougom,
Sébastien Moretti,
Vladimir Keduas,
Cédric Notredame:
The iRMSD: a local measure of sequence alignment accuracy using structural information.
ISMB (Supplement of Bioinformatics) 2006: 35-39 |
11 | EE | Fabrice Armougom,
Olivier Poirot,
Sébastien Moretti,
Desmond G. Higgins,
Phillip Bucher,
Vladimir Keduas,
Cédric Notredame:
APDB: a web server to evaluate the accuracy of sequence alignments using structural information.
Bioinformatics 22(19): 2439-2440 (2006) |
10 | EE | Sébastien Moretti,
Frédéric Reinier,
Olivier Poirot,
Fabrice Armougom,
Stéphane Audic,
Vladimir Keduas,
Cédric Notredame:
PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments.
Nucleic Acids Research 34(Web-Server-Issue): 600-603 (2006) |
9 | EE | Fabrice Armougom,
Sébastien Moretti,
Olivier Poirot,
Stéphane Audic,
Pierre Dumas,
Basile Schaeli,
Vladimir Keduas,
Cédric Notredame:
Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee.
Nucleic Acids Research 34(Web-Server-Issue): 604-608 (2006) |
2004 |
8 | | Olivier Poirot,
Karsten Suhre,
Chantal Abergel,
Eamonn O'Toole,
Cédric Notredame:
3DCoffee@igs: a web server for combining sequences and structures into a multiple sequence alignment.
Nucleic Acids Research 32(Web-Server-Issue): 37-40 (2004) |
7 | | Jean-Baptiste Claude,
Karsten Suhre,
Cédric Notredame,
Jean-Michel Claverie,
Chantal Abergel:
CaspR: a web server for automated molecular replacement using homology modelling.
Nucleic Acids Research 32(Web-Server-Issue): 606-609 (2004) |
2003 |
6 | EE | Orla O'Sullivan,
Mark Zehnder,
Desmond G. Higgins,
Philipp Bucher,
Aurelien Grosdidier,
Cédric Notredame:
APDB: a novel measure for benchmarking sequence alignment methods without reference alignments.
ISMB (Supplement of Bioinformatics) 2003: 215-221 |
5 | | Olivier Poirot,
Eamonn O'Toole,
Cédric Notredame:
Tcoffee add igs: a web server for computing, evaluating and combining multiple sequence alignments.
Nucleic Acids Research 31(13): 3503-3506 (2003) |
2001 |
4 | | Cédric Notredame:
Mocca: semi-automatic method for domain hunting.
Bioinformatics 17(4): 373-374 (2001) |
3 | | Sabine Dietmann,
Jong Park,
Cédric Notredame,
Andreas Heger,
Michael Lappe,
Liisa Holm:
A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3.
Nucleic Acids Research 29(1): 55-57 (2001) |
1998 |
2 | | Emmet A. O'Brien,
Cédric Notredame,
Desmond G. Higgins:
Optimization of ribosomal RNA profile alignments.
Bioinformatics 14(4): 332-341 (1998) |
1 | | Cédric Notredame,
Liisa Holm,
Desmond G. Higgins:
COFFEE: an objective function for multiple sequence alignments.
Bioinformatics 14(5): 407-422 (1998) |