Thomas L. Casavant

2008
57	EE	Krishna R. Kalari, Thomas L. Casavant, Todd E. Scheetz: A knowledge-based approach to predict intragenic deletions or duplications. Bioinformatics 24(18): 1975-1979 (2008)
2007
56	EE	Brian O'Leary, Steven G. Davis, Michael F. Smith, Bartley Brown, Mathew B. Kemp, Hakeem Almabrazi, Jason A. Grundstad, Thomas Burns, Vladimir Leontiev, Jeaneen Andorf, Abbot F. Clark, Val C. Sheffield, Thomas L. Casavant, Todd E. Scheetz, Edwin M. Stone, Terry A. Braun: Transcript Annotation Prioritization and Screening System (TRApss) for Mutation Screening. J. Bioinformatics and Computational Biology 5(6): 1155-1172 (2007)
2005
55	EE	Jesse D. Walters, Thomas L. Casavant, John P. Robinson, Thomas B. Bair, Terry A. Braun, Todd E. Scheetz: XenoCluster: A Grid Computing Approach to Finding Ancient Evolutionary Genetic Anomalies. PaCT 2005: 355-366
54	EE	Todd E. Scheetz, Nishank Trivedi, Kevin T. Pedretti, Terry A. Braun, Thomas L. Casavant: Gene transcript clustering: a comparison of parallel approaches. Future Generation Comp. Syst. 21(4): 731-735 (2005)
2003
53	EE	Nishank Trivedi, Kevin T. Pedretti, Terry A. Braun, Todd E. Scheetz, Thomas L. Casavant: Alternative Parallelization Strategies in EST Clustering. PaCT 2003: 384-393
52		Todd E. Scheetz, Nishank Trivedi, Chad A. Roberts, Tamara Kucaba, Brian Berger, Natalie L. Robinson, Clayton L. Birkett, Allen J. Gavin, Brian O'Leary, Terry A. Braun, Maria F. Bonaldo, John P. Robinson, Val C. Sheffield, Marcelo Bento Soares, Thomas L. Casavant: ESTprep: Preprocessing CDNA Sequence Reads. Bioinformatics 19(11): 1318-1324 (2003)
51	EE	Terry A. Braun, Todd E. Scheetz, Gregg Webster, Abe Clark, Edwin M. Stone, Val C. Sheffield, Thomas L. Casavant: Identifying Candidate Disease Genes with High-Performance Computing. The Journal of Supercomputing 26(1): 7-24 (2003)
2002
50		Allen J. Gavin, Todd E. Scheetz, Chad A. Roberts, Brian O'Leary, Terry A. Braun, Val C. Sheffield, Marcelo Bento Soares, John P. Robinson, Thomas L. Casavant: Pooled library tissue tags for EST-based gene discovery. Bioinformatics 18(9): 1162-1166 (2002)
49	EE	Nishank Trivedi, Jared Bischof, Steve Davis, Kevin T. Pedretti, Todd E. Scheetz, Terry A. Braun, Chad A. Roberts, Natalie L. Robinson, Val C. Sheffield, Marcelo Bento Soares, Thomas L. Casavant: Parallel creation of non-redundant gene indices from partial mRNA transcripts. Future Generation Comp. Syst. 18(6): 863-870 (2002)
2001
48		Andrew B. Williams, Todd A. Krygowski, Thomas L. Casavant: I-DOCS: Distributed Agent-Assisted Knowledge Fusion for Disease Gene Discovery. ICPADS 2001: 698-705
47	EE	Kevin T. Pedretti, Todd E. Scheetz, Terry A. Braun, Chad A. Roberts, Natalie L. Robinson, Thomas L. Casavant: A Parallel Expressed Sequence Tag (EST) Clustering Program. PaCT 2001: 490-497
46	EE	R. C. Braun, Kevin T. Pedretti, Thomas L. Casavant, Todd E. Scheetz, Clayton L. Birkett, Chad A. Roberts: Parallelization of local BLAST service on workstation clusters. Future Generation Comp. Syst. 17(6): 745-754 (2001)
45	EE	Thomas L. Casavant, Terry A. Braun, Sureshkumar Kaliannan, Todd E. Scheetz, Kyle J. Munn, Clayton L. Birkett: A parallel/distributed architecture for hierarchically heterogeneous web-based cooperative applications. Future Generation Comp. Syst. 17(6): 783-793 (2001)
1999
44		Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Kyle J. Munn, Sureshkumar Kaliannan: A Parallel/Distributed Srchitecture for Hierarcally Heterogeneous Web-Based Cooperative Applications. HPCN Europe 1999: 391-401
43	EE	Kevin T. Pedretti, Thomas L. Casavant, R. C. Braun, Todd E. Scheetz, Clayton L. Birkett, Chad A. Roberts: Three Complementary Approaches to Parallelization of Local BLAST Service on Workstation Clusters (invited paper). PaCT 1999: 271-282
1998
42		Todd E. Scheetz, Terry A. Braun, Kyle J. Munn, Edwin M. Stone, Val C. Sheffield, Thomas L. Casavant: GenoMap: A Distributed System for Unifying Genotyping and Genetic Linkage Analysis. Parallel Computing 24(9-10): 1567-1592 (1998)
1997
41	EE	Richard D. Dietz, Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Mark S. Andersland: Modeling the impact of run-time uncertainty on optimal computation scheduling using feedback. ICPP 1997: 481-488
40		Richard D. Dietz, Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Mark S. Andersland: Using Run-Time Uncertainty to Robustly Schedule Parallel Computation. PaCT 1997: 13-24
1996
39		Volker Strumpen, Balkrishna Ramkumar, Thomas L. Casavant, Sudhakar M. Reddy: Perspectives for High Performance Computing in Workstation Networks. HPCN Europe 1996: 880-889
38	EE	Eugene V. Zima, Karthi R. Vadivelu, Thomas L. Casavant: Mapping Techniques for Parallel Evaluation of Chains of Recurrences. IPPS 1996: 620-624
37		Todd E. Scheetz, Julie A. Gannon, Richard D. Dietz, Terry A. Braun, Thomas L. Casavant, Mark S. Andersland: Accounting for Uncertainty in the Recovers of Traces for Parallel Computing Systems. Parcella 1996: 206-213
1995
36		Volker Strumpen, Thomas L. Casavant: Implementing communication latency hiding in high-latency computer networks. HPCN Europe 1995: 86-93
1994
35		Julie A. Gannon, K. J. Williams, Mark S. Andersland, J. E. Lummp Jr., Thomas L. Casavant: Using Perturbation Tracking to Compensate for Intrusion in Message-Passing Systems. ICDCS 1994: 414-421
34		Thomas L. Casavant, Chi-Yuan Chin, Wen-Tsuen Chen, Kang G. Shin, Earl E. Swartzlander Jr., Joseph E. Urban: What Types of Research Papers Should We Be Writing? ICPADS 1994: 22-23
33		Volker Strumpen, Thomas L. Casavant: Exploting communication Latency Hiding for Parallel Network. ICPADS 1994: 620-627
32		Julie A. Gannon, K. J. Williams, Mark S. Andersland, Thomas L. Casavant, J. E. Lummp Jr.: Trace Recovery in Multi-Processing Systems: Architectural Considerations. ICPP 1994: 99-102
1993
31		D. L. Bright, Samuel A. Fineberg, Brent H. Pease, M. L. Roderick, S. Sundaram, Thomas L. Casavant: Critical Performance Path Analysis, and Efficient Code Generation Issues, for the Seamless Architecture. IPPS 1993: 590-596
30		Thomas L. Casavant, James Arthur Kohl: The IMPROV Meta-Tool Design Methodology for Visualization of Parallel Programs. MASCOTS 1993: 22-27
29		Thomas L. Casavant: Tools and Methods for Visualization of Parallel Systems and Computations - Guest Editor's Introduction. J. Parallel Distrib. Comput. 18(2): 103-104 (1993)
1992
28		Samuel A. Fineberg, Thomas L. Casavant: A Preliminary Performance Evaluation of the Seamless Parallel Processing System Architecture. ICPP (1) 1992: 280-284
27		Samuel A. Fineberg, Thomas L. Casavant, Brent H. Pease: The Seamless Approach to Reconciling Communication and Locality in Distributed-Memory Parallel Systems. IPPS 1992: 51-56
26	EE	Yiannis E. Papelis, Thomas L. Casavant: Specification and Analysis of Parallel/Distributed Software and Systems by Petri Nets With Transition Enabling Functions. IEEE Trans. Software Eng. 18(3): 252-261 (1992)
25		Howard Jay Siegel, Seth Abraham, William L. Bain, Kenneth E. Batcher, Thomas L. Casavant, Doug DeGroot, Jack B. Dennis, David C. Douglas, Tse-Yun Feng, James R. Goodman, Alan Huang, Harry F. Jordan, J. Robert Jamp, Yale N. Patt, Alan Jay Smith, James E. Smith, Lawrence Snyder, Harold S. Stone, Russ Tuck, Benjamin W. Wah: Report of the Purdue Workshop on Grand Challenges in Computer Architecture for the Support of High Performance Computing. J. Parallel Distrib. Comput. 16(3): 199-211 (1992)
24		Mikhail J. Atallah, Christina Lock Black, Dan C. Marinescu, Howard Jay Siegel, Thomas L. Casavant: Models and Algorithms for Coscheduling Compute-Intensive Tasks on a Network of Workstations. J. Parallel Distrib. Comput. 16(4): 318-327 (1992)
1991
23	EE	Mikhail J. Atallah, C. Lock, Dan C. Marinescu, Howard Jay Siegel, Thomas L. Casavant: Co-scheduling compute-intensive tasks on a network of workstations: model and algorithms. ICDCS 1991: 344-352
22	EE	Thomas L. Casavant, P. C. Bates, Thomas Bemmerl, G. M. Koob, D. A. Reed, Z. Segall: Debugging and performance monitoring for distributed systems: problems and prospects. ICDCS 1991: 378-383
21		Mark S. Andersland, Thomas L. Casavant: Recovering Unconrupted Event Traces from Corrupted Event Traces in Parallel/Distributed Computing Systems. ICPP (2) 1991: 108-112
20		Yiannis E. Papelis, Thomas L. Casavant: XPAT: An Interactive Graphical Tool for Synthesis of Concurrent Software Using Petri Nets. ICPP (2) 1991: 292-293
19		James Arthur Kohl, Thomas L. Casavant: Use of PARADISE: A Meta-Tool for Visualizing Parallel Systems. IPPS 1991: 561-567
18		James E. Lumpp Jr., Samuel A. Fineberg, Wayne G. Nation, Thomas L. Casavant, Edward C. Bronson, Howard Jay Siegel, Pierre H. Pero, Thomas Schwederski, Dan C. Marinescu: CAPS: A Coding Aid For PASM. Commun. ACM 34(11): 104-117 (1991)
17		Mukesh Singhal, Thomas L. Casavant: Distributed Computing Systems (Guest Editors' Introduction). IEEE Computer 24(8): 12-15 (1991)
16		Samuel A. Fineberg, Thomas L. Casavant, Howard Jay Siegel: Experimental Analysis of a Mixed-Mode Parallel Architecture Using Bitonic Sequence Sorting. J. Parallel Distrib. Comput. 11(3): 239-251 (1991)
1990
15		James E. Lumpp Jr., Howard Jay Siegel, Dan C. Marinescu, Thomas L. Casavant: Specification and Identification of Events for Debugging and Performance Monitoring of Distributed Multiprocessor Systems. ICDCS 1990: 476-483
14		Thomas Schwederski, Howard Jay Siegel, Thomas L. Casavant: Optimizing Task Migration Transfers Using Multistage Cube Networks. ICPP (1) 1990: 51-58
13		Samuel A. Fineberg, Thomas L. Casavant, Howard Jay Siegel: Experimental Analysis of a Mixed-Mode Parallel Architecture Performing Sequence Sorting. ICPP (3) 1990: 370-371
12		Silvio Picano, Thomas L. Casavant: An Experimental Analysis of Image Correlation on Shared versus Non-Shared Memory MIMD Parallel Computers. ICPP (3) 1990: 92-96
11	EE	Samuel A. Fineberg, Thomas L. Casavant, Howard Jay Siegel: Experimental analysis of communication/data-conditional aspects of a mixed-mode parallel architecture via synthetic computations. SC 1990: 637-646
10		Thomas L. Casavant, Jon G. Kuhl: A Communicating Finite Automata Approach to Modeling Distributed Computation and Its Application to Distributed Decision-Making. IEEE Trans. Computers 39(5): 628-639 (1990)
9	EE	Edward C. Bronson, Thomas L. Casavant, Leah H. Jamieson: Experimental Application-Driven Architecture Analysis of an SIMD/MIMD Parallel Processing System. IEEE Trans. Parallel Distrib. Syst. 1(2): 195-205 (1990)
8		Dan C. Marinescu, James E. Lumpp Jr., Thomas L. Casavant, Howard Jay Siegel: Models for Monitoring and Debugging Tools for Parallel and Distributed Software. J. Parallel Distrib. Comput. 9(2): 171-184 (1990)
1989
7		Thomas Schwederski, Howard Jay Siegel, Thomas L. Casavant: Task Migration Transfers in Multistage Cube Based Parallel Systems. ICPP (1) 1989: 296-305
6		Edward C. Bronson, Thomas L. Casavant, Leah H. Jamieson: Experimental Application-Driven Architecture Analysis of an SIMD/MIMD Parallel Processing System. ICPP (1) 1989: 59-67
1988
5		Samuel A. Fineberg, Thomas L. Casavant, Thomas Schwederski, Howard Jay Siegel: Non-Deterministic Instruction Time Experiments on the PASM System Prototype. ICPP (1) 1988: 444-451
4	EE	Thomas L. Casavant, Jon G. Kuhl: Effects of Response and Stability on Scheduling in Distributed Computing Systems. IEEE Trans. Software Eng. 14(11): 1578-1588 (1988)
3	EE	Thomas L. Casavant, Jon G. Kuhl: A Taxonomy of Scheduling in General-Purpose Distributed Computing Systems. IEEE Trans. Software Eng. 14(2): 141-154 (1988)
1987
2		Thomas L. Casavant, Jon G. Kuhl: Analysis of Three Dynamic Distributed Load-Balancing Strategies with Varying Global Information Requirements. ICDCS 1987: 185-193
1986
1		Thomas L. Casavant, Jon G. Kuhl: A Formal Model of Distributed Decision-Making and Its Application to Distributed Load Balancing. ICDCS 1986: 232-239

Coauthor Index

1	Seth Abraham	[25]
2	Hakeem Almabrazi	[56]
3	Mark S. Andersland	[21] [32] [35] [37] [40] [41]
4	Jeaneen Andorf	[56]
5	Mikhail J. Atallah	[23] [24]
6	William L. Bain	[25]
7	Thomas B. Bair	[55]
8	Kenneth E. Batcher	[25]
9	P. C. Bates	[22]
10	Thomas Bemmerl	[22]
11	Brian Berger	[52]
12	Clayton L. Birkett	[43] [45] [46] [52]
13	Jared Bischof	[49]
14	Christina Lock Black	[24]
15	Maria F. Bonaldo	[52]
16	R. C. Braun	[43] [46]
17	Terry A. Braun	[37] [40] [41] [42] [44] [45] [47] [49] [50] [51] [52] [53] [54] [55] [56]
18	D. L. Bright	[31]
19	Edward C. Bronson	[6] [9] [18]
20	Bartley Brown	[56]
21	Thomas Burns	[56]
22	Wen-Tsuen Chen	[34]
23	Chi-Yuan Chin	[34]
24	Abbot F. Clark	[56]
25	Abe Clark	[51]
26	Steve Davis	[49]
27	Steven G. Davis	[56]
28	Doug DeGroot	[25]
29	Jack B. Dennis	[25]
30	Richard D. Dietz	[37] [40] [41]
31	David C. Douglas	[25]
32	Tse-Yun Feng	[25]
33	Samuel A. Fineberg	[5] [11] [13] [16] [18] [27] [28] [31]
34	Julie A. Gannon	[32] [35] [37]
35	Allen J. Gavin	[50] [52]
36	James R. Goodman	[25]
37	Jason A. Grundstad	[56]
38	Alan Huang	[25]
39	Leah H. Jamieson	[6] [9]
40	J. Robert Jamp	[25]
41	Harry F. Jordan	[25]
42	Krishna R. Kalari	[57]
43	Sureshkumar Kaliannan	[44] [45]
44	Mathew B. Kemp	[56]
45	James Arthur Kohl	[19] [30]
46	G. M. Koob	[22]
47	Todd A. Krygowski	[48]
48	Tamara Kucaba	[52]
49	Jon G. Kuhl	[1] [2] [3] [4] [10]
50	Vladimir Leontiev	[56]
51	C. Lock	[23]
52	J. E. Lummp Jr.	[32] [35]
53	James E. Lumpp Jr.	[8] [15] [18]
54	Dan C. Marinescu	[8] [15] [18] [23] [24]
55	Kyle J. Munn	[42] [44] [45]
56	Wayne G. Nation	[18]
57	Brian O'Leary	[50] [52] [56]
58	Yiannis E. Papelis	[20] [26]
59	Yale N. Patt	[25]
60	Brent H. Pease	[27] [31]
61	Kevin T. Pedretti	[43] [46] [47] [49] [53] [54]
62	Pierre H. Pero	[18]
63	Silvio Picano	[12]
64	Balkrishna Ramkumar	[39]
65	Sudhakar M. Reddy	[39]
66	D. A. Reed	[22]
67	Chad A. Roberts	[43] [46] [47] [49] [50] [52]
68	John P. Robinson	[50] [52] [55]
69	Natalie L. Robinson	[47] [49] [52]
70	M. L. Roderick	[31]
71	Todd E. Scheetz	[37] [40] [41] [42] [43] [44] [45] [46] [47] [49] [50] [51] [52] [53] [54] [55] [56] [57]
72	Thomas Schwederski	[5] [7] [14] [18]
73	Z. Segall	[22]
74	Val C. Sheffield	[42] [49] [50] [51] [52] [56]
75	Kang G. Shin	[34]
76	Howard Jay Siegel	[5] [7] [8] [11] [13] [14] [15] [16] [18] [23] [24] [25]
77	Mukesh Singhal	[17]
78	Alan Jay Smith	[25]
79	James E. Smith	[25]
80	Michael F. Smith	[56]
81	Lawrence Snyder (Larry Snyder)	[25]
82	Marcelo Bento Soares	[49] [50] [52]
83	Edwin M. Stone	[42] [51] [56]
84	Harold S. Stone	[25]
85	Volker Strumpen	[33] [36] [39]
86	S. Sundaram	[31]
87	Earl E. Swartzlander Jr.	[34]
88	Nishank Trivedi	[49] [52] [53] [54]
89	Russ Tuck	[25]
90	Joseph E. Urban	[34]
91	Karthi R. Vadivelu	[38]
92	Benjamin W. Wah	[25]
93	Jesse D. Walters	[55]
94	Gregg Webster	[51]
95	Andrew B. Williams	[48]
96	K. J. Williams	[32] [35]
97	Eugene V. Zima	[38]

Colors in the list of coauthors