2008 | ||
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18 | EE | Krishna R. Kalari, Thomas L. Casavant, Todd E. Scheetz: A knowledge-based approach to predict intragenic deletions or duplications. Bioinformatics 24(18): 1975-1979 (2008) |
2007 | ||
17 | EE | Brian O'Leary, Steven G. Davis, Michael F. Smith, Bartley Brown, Mathew B. Kemp, Hakeem Almabrazi, Jason A. Grundstad, Thomas Burns, Vladimir Leontiev, Jeaneen Andorf, Abbot F. Clark, Val C. Sheffield, Thomas L. Casavant, Todd E. Scheetz, Edwin M. Stone, Terry A. Braun: Transcript Annotation Prioritization and Screening System (TRApss) for Mutation Screening. J. Bioinformatics and Computational Biology 5(6): 1155-1172 (2007) |
2005 | ||
16 | EE | Jesse D. Walters, Thomas L. Casavant, John P. Robinson, Thomas B. Bair, Terry A. Braun, Todd E. Scheetz: XenoCluster: A Grid Computing Approach to Finding Ancient Evolutionary Genetic Anomalies. PaCT 2005: 355-366 |
15 | EE | Todd E. Scheetz, Nishank Trivedi, Kevin T. Pedretti, Terry A. Braun, Thomas L. Casavant: Gene transcript clustering: a comparison of parallel approaches. Future Generation Comp. Syst. 21(4): 731-735 (2005) |
2003 | ||
14 | EE | Nishank Trivedi, Kevin T. Pedretti, Terry A. Braun, Todd E. Scheetz, Thomas L. Casavant: Alternative Parallelization Strategies in EST Clustering. PaCT 2003: 384-393 |
13 | Todd E. Scheetz, Nishank Trivedi, Chad A. Roberts, Tamara Kucaba, Brian Berger, Natalie L. Robinson, Clayton L. Birkett, Allen J. Gavin, Brian O'Leary, Terry A. Braun, Maria F. Bonaldo, John P. Robinson, Val C. Sheffield, Marcelo Bento Soares, Thomas L. Casavant: ESTprep: Preprocessing CDNA Sequence Reads. Bioinformatics 19(11): 1318-1324 (2003) | |
12 | EE | Terry A. Braun, Todd E. Scheetz, Gregg Webster, Abe Clark, Edwin M. Stone, Val C. Sheffield, Thomas L. Casavant: Identifying Candidate Disease Genes with High-Performance Computing. The Journal of Supercomputing 26(1): 7-24 (2003) |
2002 | ||
11 | Allen J. Gavin, Todd E. Scheetz, Chad A. Roberts, Brian O'Leary, Terry A. Braun, Val C. Sheffield, Marcelo Bento Soares, John P. Robinson, Thomas L. Casavant: Pooled library tissue tags for EST-based gene discovery. Bioinformatics 18(9): 1162-1166 (2002) | |
10 | EE | Nishank Trivedi, Jared Bischof, Steve Davis, Kevin T. Pedretti, Todd E. Scheetz, Terry A. Braun, Chad A. Roberts, Natalie L. Robinson, Val C. Sheffield, Marcelo Bento Soares, Thomas L. Casavant: Parallel creation of non-redundant gene indices from partial mRNA transcripts. Future Generation Comp. Syst. 18(6): 863-870 (2002) |
2001 | ||
9 | EE | Kevin T. Pedretti, Todd E. Scheetz, Terry A. Braun, Chad A. Roberts, Natalie L. Robinson, Thomas L. Casavant: A Parallel Expressed Sequence Tag (EST) Clustering Program. PaCT 2001: 490-497 |
8 | EE | R. C. Braun, Kevin T. Pedretti, Thomas L. Casavant, Todd E. Scheetz, Clayton L. Birkett, Chad A. Roberts: Parallelization of local BLAST service on workstation clusters. Future Generation Comp. Syst. 17(6): 745-754 (2001) |
7 | EE | Thomas L. Casavant, Terry A. Braun, Sureshkumar Kaliannan, Todd E. Scheetz, Kyle J. Munn, Clayton L. Birkett: A parallel/distributed architecture for hierarchically heterogeneous web-based cooperative applications. Future Generation Comp. Syst. 17(6): 783-793 (2001) |
1999 | ||
6 | Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Kyle J. Munn, Sureshkumar Kaliannan: A Parallel/Distributed Srchitecture for Hierarcally Heterogeneous Web-Based Cooperative Applications. HPCN Europe 1999: 391-401 | |
5 | EE | Kevin T. Pedretti, Thomas L. Casavant, R. C. Braun, Todd E. Scheetz, Clayton L. Birkett, Chad A. Roberts: Three Complementary Approaches to Parallelization of Local BLAST Service on Workstation Clusters (invited paper). PaCT 1999: 271-282 |
1998 | ||
4 | Todd E. Scheetz, Terry A. Braun, Kyle J. Munn, Edwin M. Stone, Val C. Sheffield, Thomas L. Casavant: GenoMap: A Distributed System for Unifying Genotyping and Genetic Linkage Analysis. Parallel Computing 24(9-10): 1567-1592 (1998) | |
1997 | ||
3 | EE | Richard D. Dietz, Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Mark S. Andersland: Modeling the impact of run-time uncertainty on optimal computation scheduling using feedback. ICPP 1997: 481-488 |
2 | Richard D. Dietz, Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Mark S. Andersland: Using Run-Time Uncertainty to Robustly Schedule Parallel Computation. PaCT 1997: 13-24 | |
1996 | ||
1 | Todd E. Scheetz, Julie A. Gannon, Richard D. Dietz, Terry A. Braun, Thomas L. Casavant, Mark S. Andersland: Accounting for Uncertainty in the Recovers of Traces for Parallel Computing Systems. Parcella 1996: 206-213 |