12. RECOMB 2008:
Singapore
Martin Vingron, Limsoon Wong (Eds.):
Research in Computational Molecular Biology, 12th Annual International Conference, RECOMB 2008, Singapore, March 30 - April 2, 2008. Proceedings.
Lecture Notes in Computer Science 4955 Springer 2008, ISBN 978-3-540-78838-6 BibTeX
- Temple F. Smith:
Computational Biology: Its Challenges Past, Present, and Future.
1-2
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- Caroline C. Friedel, Jan Krumsiek, Ralf Zimmer:
Bootstrapping the Interactome: Unsupervised Identification of Protein Complexes in Yeast.
3-16
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- Sourav Chatterji, Ichitaro Yamazaki, Zhaojun Bai, Jonathan A. Eisen:
CompostBin: A DNA Composition-Based Algorithm for Binning Environmental Shotgun Reads.
17-28
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- Yu Zhang, Giltae Song, Tomás Vinar, Eric D. Green, Adam C. Siepel, Webb Miller:
Reconstructing the Evolutionary History of Complex Human Gene Clusters.
29-49
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- Paul Medvedev, Michael Brudno:
Ab Initio Whole Genome Shotgun Assembly with Mated Short Reads.
50-64
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- Howard Cedar:
Orchestration of DNA Methylation.
65
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- Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Selen Uguroglu, Eric P. Xing:
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes.
66-81
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- Yanxin Shi, Itamar Simon, Tom Mitchell, Ziv Bar-Joseph:
A Combined Expression-Interaction Model for Inferring the Temporal Activity of Transcription Factors.
82-97
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- Raluca Gordân, Leelavati Narlikar, Alexander J. Hartemink:
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery.
98-111
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- John Hawkins, Timothy L. Bailey:
The Statistical Power of Phylogenetic Motif Models.
112-126
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- Edison T. Liu:
Transcriptional Regulation and Cancer Genomics.
127
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- Fuhui Long, Hanchuan Peng, Xiao Liu, Stuart K. Kim, Gene Myers:
Automatic Recognition of Cells (ARC) for 3D Images of C. elegans.
128-139
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- Ritendra Datta, Marshall W. Bern:
Spectrum Fusion: Using Multiple Mass Spectra for De Novo Peptide Sequencing.
140-153
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- Yu Lin, Yantao Qiao, Shiwei Sun, Chungong Yu, Gongjin Dong, Dongbo Bu:
A Fragmentation Event Model for Peptide Identification by Mass Spectrometry.
154-166
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- Yong Fuga Li, Randy J. Arnold, Yixue Li, Predrag Radivojac, Quanhu Sheng, Haixu Tang:
A Bayesian Approach to Protein Inference Problem in Shotgun Proteomics.
167-180
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- Nuno Bandeira, Julio Ng, Dario Meluzzi, Roger G. Linington, Pieter Dorrestein, Pavel A. Pevzner:
De Novo Sequencing of Nonribosomal Peptides.
181-195
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- Sang Yup Lee:
Systems Metabolic Engineering.
196
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- Mustafa Kirac, Gultekin Özsoyoglu:
Protein Function Prediction Based on Patterns in Biological Networks.
197-213
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- Jason Flannick, Antal F. Novak, Chuong B. Do, Balaji S. Srinivasan, Serafim Batzoglou:
Automatic Parameter Learning for Multiple Network Alignment.
214-231
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- Michael R. Mehan, Juan Nunez-Iglesias, Mrinal Kalakrishnan, Michael S. Waterman, Xianghong Jasmine Zhou:
An Integrative Network Approach to Map the Transcriptome to the Phenome.
232-245
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- Maxim Kalaev, Vineet Bafna, Roded Sharan:
Fast and Accurate Alignment of Multiple Protein Networks.
246-256
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- Michael Baym, Chris Bakal, Norbert Perrimon, Bonnie Berger:
High-Resolution Modeling of Cellular Signaling Networks.
257-271
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- Andrei N. Lupas:
At the Origin of Life: How Did Folded Proteins Evolve?
272
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- J. Gordon Burleigh, Mukul S. Bansal, André Wehe, Oliver Eulenstein:
Locating Multiple Gene Duplications through Reconciled Trees.
273-284
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- Jing Zhang, Xin Gao, Jinbo Xu, Ming Li:
Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information.
285-299
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- Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg:
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins.
300-314
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- Christophe Dessimoz, Daniel Margadant, Gaston H. Gonnet:
DLIGHT - Lateral Gene Transfer Detection Using Pairwise Evolutionary Distances in a Statistical Framework.
315-330
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- Sebastian Böcker, Katharina Jahn, Julia Mixtacki, Jens Stoye:
Computation of Median Gene Clusters.
331-345
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- Suzanne Cory:
BCL-2: From Translocation to Therapy.
346
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- Igor Ulitsky, Richard M. Karp, Ron Shamir:
Detecting Disease-Specific Dysregulated Pathways Via Analysis of Clinical Expression Profiles.
347-359
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- Delbert Dueck, Brendan J. Frey, Nebojsa Jojic, Vladimir Jojic, Guri Giaever, Andrew Emili, Gabe Musso, Robert Hegele:
Constructing Treatment Portfolios Using Affinity Propagation.
360-371
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- Michael Sammeth, Gabriel Valiente, Roderic Guigó:
Bubbles: Alternative Splicing Events of Arbitrary Dimension in Splicing Graphs.
372-395
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- Bin Ma, Xiaoming Sun:
More Efficient Algorithms for Closest String and Substring Problems.
396-409
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- Denis Smirnov, Vivian G. Cheung:
Disruption of a Transcriptional Regulatory Pathway Contributes to Phenotypes in Carriers of Ataxia Telangiectasia.
410
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- Oliver Stegle, Anitha Kannan, Richard Durbin, John M. Winn:
Accounting for Non-genetic Factors Improves the Power of eQTL Studies.
411-422
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- Andreas Sundquist, Eugene Fratkin, Chuong B. Do, Serafim Batzoglou:
Effects of Genetic Divergence in Identifying Ancestral Origin Using HAPAA.
423
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- Sriram Sankararaman, Gad Kimmel, Eran Halperin, Michael I. Jordan:
On the Inference of Ancestries in Admixed Populations.
424-433
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- Eleazar Eskin:
Increasing Power in Association Studies by Using Linkage Disequilibrium Structure and Molecular Function as Prior Information.
434
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- Sivan Bercovici, Dan Geiger, Liran Shlush, Karl Skorecki, Alan Templeton:
Panel Construction for Mapping in Admixed Populations Via Expected Mutual Information.
435-449
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- Leo van Iersel, Judith Keijsper, Steven Kelk, Leen Stougie, Ferry Hagen, Teun Boekhout:
Constructing Level-2 Phylogenetic Networks from Triplets.
450-462
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- Rune B. Lyngsø, Yun S. Song, Jotun Hein:
Accurate Computation of Likelihoods in the Coalescent with Recombination Via Parsimony.
463-477
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Copyright © Sat May 16 23:35:46 2009
by Michael Ley (ley@uni-trier.de)
