Ziv Bar-Joseph

2008
26	EE	Tien-ho Lin, Naftali Kaminski, Ziv Bar-Joseph: Alignment and classification of time series gene expression in clinical studies. ISMB 2008: 147-155
25	EE	Yanjun Qi, Fernanda Balem, Christos Faloutsos, Judith Klein-Seetharaman, Ziv Bar-Joseph: Protein complex identification by supervised graph local clustering. ISMB 2008: 250-268
24	EE	Yanxin Shi, Itamar Simon, Tom Mitchell, Ziv Bar-Joseph: A Combined Expression-Interaction Model for Inferring the Temporal Activity of Transcription Factors. RECOMB 2008: 82-97
23	EE	Anupam Gupta, Ziv Bar-Joseph: Extracting Dynamics from Static Cancer Expression Data. IEEE/ACM Trans. Comput. Biology Bioinform. 5(2): 172-182 (2008)
2007
22	EE	Yanxin Shi, Michael Klustein, Itamar Simon, Tom Mitchell, Ziv Bar-Joseph: Continuous hidden process model for time series expression experiments. ISMB/ECCB (Supplement of Bioinformatics) 2007: 459-467
21	EE	Yanxin Shi, Tom Mitchell, Ziv Bar-Joseph: Inferring pairwise regulatory relationships from multiple time series datasets. Bioinformatics 23(6): 755-763 (2007)
20	EE	Naftali Kaminski, Ziv Bar-Joseph: A Patient-Gene Model for Temporal Expression Profiles in Clinical Studies. Journal of Computational Biology 14(3): 324-338 (2007)
2006
19	EE	Yong Lu, Ronald Rosenfeld, Ziv Bar-Joseph: Identifying cycling genes by combining sequence homology and expression data. ISMB (Supplement of Bioinformatics) 2006: 314-322
18	EE	Naftali Kaminski, Ziv Bar-Joseph: A Patient-Gene Model for Temporal Expression Profiles in Clinical Studies. RECOMB 2006: 69-82
17	EE	Jason Ernst, Ziv Bar-Joseph: STEM: a tool for the analysis of short time series gene expression data. BMC Bioinformatics 7: 191 (2006)
2005
16	EE	Rohit Singh, Nathan Palmer, David K. Gifford, Bonnie Berger, Ziv Bar-Joseph: Active learning for sampling in time-series experiments with application to gene expression analysis. ICML 2005: 832-839
15	EE	Jason Ernst, Gerard J. Nau, Ziv Bar-Joseph: Clustering short time series gene expression data. ISMB (Supplement of Bioinformatics) 2005: 159-168
14	EE	Yanjun Qi, Judith Klein-Seetharaman, Ziv Bar-Joseph: Random Forest Similarity for Protein-Protein Interaction Prediction from Multiple Sources. Pacific Symposium on Biocomputing 2005
2004
13	EE	Ziv Bar-Joseph, Shlomit Farkash, David K. Gifford, Itamar Simon, Roni Rosenfeld: Deconvolving cell cycle expression data with complementary information. ISMB/ECCB (Supplement of Bioinformatics) 2004: 23-30
12	EE	Ziv Bar-Joseph: Analyzing time series gene expression data. Bioinformatics 20(16): 2493-2503 (2004)
2003
11		Ziv Bar-Joseph, Erik D. Demaine, David K. Gifford, Nathan Srebro, Angèle M. Hamel, Tommi Jaakkola: K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data. Bioinformatics 19(9): 1070-1078 (2003)
10	EE	Ziv Bar-Joseph, Daniel Cohen-Or: Hierarchical Context-based Pixel Ordering. Comput. Graph. Forum 22(3): 349-358 (2003)
9	EE	Ziv Bar-Joseph, Georg Gerber, David K. Gifford, Tommi Jaakkola, Itamar Simon: Continuous Representations of Time-Series Gene Expression Data. Journal of Computational Biology 10(3/4): 341-356 (2003)
2002
8	EE	Ziv Bar-Joseph, Idit Keidar, Nancy A. Lynch: Early-Delivery Dynamic Atomic Broadcast. DISC 2002: 1-16
7	EE	Ziv Bar-Joseph, Georg Gerber, David K. Gifford, Tommi Jaakkola, Itamar Simon: A new approach to analyzing gene expression time series data. RECOMB 2002: 39-48
6	EE	Ziv Bar-Joseph, Erik D. Demaine, David K. Gifford, Angèle M. Hamel, Tommi Jaakkola, Nathan Srebro: K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data. WABI 2002: 506-520
5	EE	Shlomo Dubnov, Ziv Bar-Joseph, Ran El-Yaniv, Dani Lischinski, Michael Werman: Synthesizing Sound Textures through Wavelet Tree Learning. IEEE Computer Graphics and Applications 22(4): 38-48 (2002)
2001
4		Ziv Bar-Joseph, David K. Gifford, Tommi Jaakkola: Fast optimal leaf ordering for hierarchical clustering. ISMB (Supplement of Bioinformatics) 2001: 22-29
3	EE	Ziv Bar-Joseph, Ran El-Yaniv, Dani Lischinski, Michael Werman: Texture Mixing and Texture Movie Synthesis Using Statistical Learning. IEEE Trans. Vis. Comput. Graph. 7(2): 120-135 (2001)
2000
2		Ziv Bar-Joseph, Idit Keidar, Tal Anker, Nancy A. Lynch: Totally Ordered Multicast with Bounded Delays and Variable Rates. OPODIS 2000: 143-162
1998
1	EE	Ziv Bar-Joseph, Michael Ben-Or: A Tight Lower Bound for Randomized Synchronous Consensus. PODC 1998: 193-199

Coauthor Index

1	Tal Anker	[2]
2	Fernanda Balem	[25]
3	Michael Ben-Or	[1]
4	Bonnie Berger	[16]
5	Daniel Cohen-Or	[10]
6	Erik D. Demaine	[6] [11]
7	Shlomo Dubnov	[5]
8	Ran El-Yaniv	[3] [5]
9	Jason Ernst	[15] [17]
10	Christos Faloutsos	[25]
11	Shlomit Farkash	[13]
12	Georg Gerber	[7] [9]
13	David K. Gifford	[4] [6] [7] [9] [11] [13] [16]
14	Anupam Gupta	[23]
15	Angèle M. Hamel	[6] [11]
16	Tommi Jaakkola	[4] [6] [7] [9] [11]
17	Naftali Kaminski	[18] [20] [26]
18	Idit Keidar	[2] [8]
19	Judith Klein-Seetharaman	[14] [25]
20	Michael Klustein	[22]
21	Tien-ho Lin	[26]
22	Dani Lischinski	[3] [5]
23	Yong Lu	[19]
24	Nancy A. Lynch	[2] [8]
25	Tom Mitchell	[21] [22] [24]
26	Gerard J. Nau	[15]
27	Nathan Palmer	[16]
28	Yanjun Qi	[14] [25]
29	Ronald Rosenfeld (Roni Rosenfeld)	[13] [19]
30	Yanxin Shi	[21] [22] [24]
31	Itamar Simon	[7] [9] [13] [22] [24]
32	Rohit Singh	[16]
33	Nathan Srebro	[6] [11]
34	Michael Werman	[3] [5]

Colors in the list of coauthors