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Alexander J. Hartemink

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2008
27EEJoshua W. Robinson, Alexander J. Hartemink: Non-stationary dynamic Bayesian networks. NIPS 2008: 1369-1376
26EEMartha L. Bulyk, Ernest Fraenkel, Alexander J. Hartemink, Yael Mandel-Gutfreund: Session Introduction. Pacific Symposium on Biocomputing 2008: 438-440
25EERaluca Gordân, Alexander J. Hartemink: Using DNA Duplex Stability Information for Transcription Factor Binding Site Discovery. Pacific Symposium on Biocomputing 2008: 453-464
24EERaluca Gordân, Leelavati Narlikar, Alexander J. Hartemink: A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery. RECOMB 2008: 98-111
2007
23EEMartha L. Bulyk, Alexander J. Hartemink, Ernest Fraenkel, Gary D. Stormo: Session Introduction. Pacific Symposium on Biocomputing 2007: 470-471
22EELeelavati Narlikar, Raluca Gordân, Alexander J. Hartemink: Nucleosome Occupancy Information Improves de novo Motif Discovery. RECOMB 2007: 107-121
21EEAllister Bernard, David S. Vaughn, Alexander J. Hartemink: Reconstructing the Topology of Protein Complexes. RECOMB 2007: 32-46
2006
20EELeelavati Narlikar, Raluca Gordân, Uwe Ohler, Alexander J. Hartemink: Informative priors based on transcription factor structural class improve de novo motif discovery. ISMB (Supplement of Bioinformatics) 2006: 384-392
19EEPallavi N. Pratapa, Edward F. Patz Jr., Alexander J. Hartemink: Finding Diagnostic Biomarkers in Proteomic Spectra. Pacific Symposium on Biocomputing 2006: 279-290
18EELeelavati Narlikar, Alexander J. Hartemink: Sequence features of DNA binding sites reveal structural class of associated transcription factor. Bioinformatics 22(2): 157-163 (2006)
2005
17EEAllister Bernard, Alexander J. Hartemink: Informative Structure Priors: Joint Learning of Dynamic Regulatory Networks from Multiple Types of Data. Pacific Symposium on Biocomputing 2005
16EEAlexander J. Hartemink, Eran Segal: Session Introduction: Joint Learning from Multiple Types of Genomic Data. Pacific Symposium on Biocomputing 2005
15EEPeng Yin, Alexander J. Hartemink: Theoretical and practical advances in genome halving. Bioinformatics 21(7): 869-879 (2005)
14EEBalaji Krishnapuram, Lawrence Carin, Mário A. T. Figueiredo, Alexander J. Hartemink: Sparse Multinomial Logistic Regression: Fast Algorithms and Generalization Bounds. IEEE Trans. Pattern Anal. Mach. Intell. 27(6): 957-968 (2005)
2004
13EEBalaji Krishnapuram, David Williams, Ya Xue, Alexander J. Hartemink, Lawrence Carin, Mário A. T. Figueiredo: On Semi-Supervised Classification. NIPS 2004
12EEAlexander J. Hartemink, Eran Segal: Session Introduction. Pacific Symposium on Biocomputing 2004: 262-263
11EEJing Yu, V. Anne Smith, Paul P. Wang, Alexander J. Hartemink, Erich D. Jarvis: Advances to Bayesian network inference for generating causal networks from observational biological data. Bioinformatics 20(18): 3594-3603 (2004)
10EEBalaji Krishnapuram, Alexander J. Hartemink, Lawrence Carin, Mário A. T. Figueiredo: A Bayesian Approach to Joint Feature Selection and Classifier Design. IEEE Trans. Pattern Anal. Mach. Intell. 26(9): 1105-1111 (2004)
9EEBalaji Krishnapuram, Lawrence Carin, Alexander J. Hartemink: Joint Classifier and Feature Optimization for Comprehensive Cancer Diagnosis Using Gene Expression Data. Journal of Computational Biology 11(2/3): 227-242 (2004)
2003
8EEPeter D. Karp, Eric P. Neumann, Alexander J. Hartemink, Pedro Romero: Genome, Pathway, and Interaction Bioinformatics - Session Introduction. Pacific Symposium on Biocomputing 2003: 101-103
7EEV. Anne Smith, Erich D. Jarvis, Alexander J. Hartemink: Influence of Network Topology and Data Collection on Network Inference. Pacific Symposium on Biocomputing 2003: 164-175
6EEBalaji Krishnapuram, Lawrence Carin, Alexander J. Hartemink: Joint classifier and feature optimization for cancer diagnosis using gene expression data. RECOMB 2003: 167-175
2002
5 V. Anne Smith, Erich D. Jarvis, Alexander J. Hartemink: Evaluating functional network inference using simulations of complex biological systems. ISMB 2002: 216-224
4EEAlexander J. Hartemink, David K. Gifford, Tommi Jaakkola, Richard A. Young: Combining Location and Expression Data for Principled Discovery of Genetic Regulatory Network Models. Pacific Symposium on Biocomputing 2002: 437-449
3EEAlexander J. Hartemink, David K. Gifford, Tommi Jaakkola, Richard A. Young: Bayesian Methods for Elucidating Genetic Regulatory Networks. IEEE Intelligent Systems 17(2): 37-43 (2002)
2001
2EEAlexander J. Hartemink, David K. Gifford, Tommi Jaakkola, Richard A. Young: Using Graphical Models and Genomic Expression Data to Statistically Validate Models of Genetic Regulatory Networks. Pacific Symposium on Biocomputing 2001: 422-433
1999
1EEStuart E. Schechter, Todd Parnell, Alexander J. Hartemink: Anonymous Authentication of Membership in Dynamic Groups. Financial Cryptography 1999: 184-195

Coauthor Index

1Allister Bernard [17] [21]
2Martha L. Bulyk [23] [26]
3Lawrence Carin [6] [9] [10] [13] [14]
4Mário A. T. Figueiredo [10] [13] [14]
5Ernest Fraenkel [23] [26]
6David K. Gifford [2] [3] [4]
7Raluca Gordân [20] [22] [24] [25]
8Tommi Jaakkola [2] [3] [4]
9Erich D. Jarvis [5] [7] [11]
10Peter D. Karp [8]
11Balaji Krishnapuram [6] [9] [10] [13] [14]
12Yael Mandel-Gutfreund [26]
13Leelavati Narlikar [18] [20] [22] [24]
14Eric P. Neumann [8]
15Uwe Ohler [20]
16Todd Parnell [1]
17Edward F. Patz Jr. [19]
18Pallavi N. Pratapa [19]
19Joshua W. Robinson [27]
20Pedro Romero [8]
21Stuart E. Schechter [1]
22Eran Segal [12] [16]
23V. Anne Smith [5] [7] [11]
24Gary D. Stormo [23]
25David S. Vaughn [21]
26Paul P. Wang [11]
27David Williams [13]
28Ya Xue [13]
29Peng Yin [15]
30Richard A. Young [2] [3] [4]
31Jing Yu [11]

Colors in the list of coauthors

Copyright © Sun May 17 03:24:02 2009 by Michael Ley (ley@uni-trier.de)