Jinbo Xu

2008
27	EE	Fei Xia, Yong Dou, Jinbo Xu: Hardware BLAST Algorithms with Multi-seeds Detection and Parallel Extension. ARC 2008: 39-50
26	EE	Shuai Cheng Li, Dongbo Bu, Jinbo Xu, Ming Li: Finding Largest Well-Predicted Subset of Protein Structure Models. CPM 2008: 44-55
25	EE	Jie Zhou, Yong Dou, Yuanwu Lei, Jinbo Xu, Yazhuo Dong: Double Precision Hybrid-Mode Floating-Point FPGA CORDIC Co-processor. HPCC 2008: 182-189
24	EE	Shuai Cheng Li, Dongbo Bu, Xin Gao, Jinbo Xu, Ming Li: Designing succinct structural alphabets. ISMB 2008: 182-189
23	EE	Rohit Singh, Jinbo Xu, Bonnie Berger: Global Alignment of Multiple Protein Interaction Networks. Pacific Symposium on Biocomputing 2008: 303-314
22	EE	Jing Zhang, Xin Gao, Jinbo Xu, Ming Li: Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information. RECOMB 2008: 285-299
21	EE	Bonnie Berger, Rohit Singh, Jinbo Xu: Graph algorithms for biological systems analysis. SODA 2008: 142-151
2007
20	EE	Yong Dou, Jinbo Xu: FPGA-Accelerated Active Shape Model for Real-Time People Tracking. Asia-Pacific Computer Systems Architecture Conference 2007: 268-279
19	EE	Jianbo Qian, Shuai Cheng Li, Dongbo Bu, Ming Li, Jinbo Xu: Finding Compact Structural Motifs. CPM 2007: 142-149
18	EE	Jinbo Xu, Yong Dou, Junfeng Li, Xingming Zhou, Qiang Dou: FPGA Accelerating Algorithms of Active Shape Model in People Tracking Applications. DSD 2007: 432-435
17	EE	Rohit Singh, Jinbo Xu, Bonnie Berger: Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology. RECOMB 2007: 16-31
16	EE	Jinbo Xu, Feng Jiao, Bonnie Berger: A Parameterized Algorithm for Protein Structure Alignment. Journal of Computational Biology 14(5): 564-577 (2007)
2006
15	EE	Rohit Singh, Jinbo Xu, Bonnie Berger: Struct2Net: Integrating Structure into Protein-Protein Interaction Prediction. Pacific Symposium on Biocomputing 2006: 403-414
14	EE	Jinbo Xu, Feng Jiao, Bonnie Berger: A Parameterized Algorithm for Protein Structure Alignment. RECOMB 2006: 488-499
13	EE	Jinbo Xu, Bonnie Berger: Fast and accurate algorithms for protein side-chain packing. J. ACM 53(4): 533-557 (2006)
12	EE	Jinbo Xu, Daniel G. Brown, Ming Li, Bin Ma: Optimizing Multiple Spaced Seeds for Homology Search. Journal of Computational Biology 13(7): 1355-1368 (2006)
2005
11	EE	Jinbo Xu, Libo Yu, Ming Li: Consensus fold recognition by predicted model quality. APBC 2005: 73-83
10	EE	Jinbo Xu, Feng Jiao, Bonnie Berger: A Tree-Decomposition Approach to Protein Structure Prediction. CSB 2005: 247-256
9	EE	Thomas Tang, Jinbo Xu, Ming Li: Discovering Sequence-Structure Motifs from Protein Segments and Two Applications. Pacific Symposium on Biocomputing 2005
8	EE	Jinbo Xu: Rapid Protein Side-Chain Packing via Tree Decomposition. RECOMB 2005: 423-439
7	EE	Jinbo Xu: Fold Recognition by Predicted Alignment Accuracy. IEEE/ACM Trans. Comput. Biology Bioinform. 2(2): 157-165 (2005)
2004
6	EE	Jinbo Xu, Daniel G. Brown, Ming Li, Bin Ma: Optimizing Multiple Spaced Seeds for Homology Search. CPM 2004: 47-58
5	EE	Jinbo Xu, Ming Li, Ying Xu: Protein Threading by Linear Programming: Theoretical Analysis and Computational Results. J. Comb. Optim. 8(4): 403-418 (2004)
2003
4	EE	Jinbo Xu, Ming Li, Guo-Hui Lin, Dongsup Kim, Ying Xu: Protein Threading by Linear Programming. Pacific Symposium on Biocomputing 2003: 264-275
3	EE	Jinbo Xu: Speedup LP Approach to Protein Threading via Graph Reduction. WABI 2003: 374-388
2	EE	Jinbo Xu, Ming Li, Dongsup Kim, Ying Xu: Raptor: Optimal Protein Threading by Linear Programming. J. Bioinformatics and Computational Biology 1(1): 95-118 (2003)
1	EE	Zhi-Zhong Chen, Tao Jiang, Guo-Hui Lin, Jianjun Wen, Dong Xu, Jinbo Xu, Ying Xu: Approximation algorithms for NMR spectral peak assignment. Theor. Comput. Sci. 1-3(299): 211-229 (2003)

Coauthor Index

1	Bonnie Berger	[10] [13] [14] [15] [16] [17] [21] [23]
2	Daniel G. Brown	[6] [12]
3	Dongbo Bu	[19] [24] [26]
4	Zhi-Zhong Chen	[1]
5	Yazhuo Dong	[25]
6	Qiang Dou	[18]
7	Yong Dou	[18] [20] [25] [27]
8	Xin Gao	[22] [24]
9	Tao Jiang	[1]
10	Feng Jiao	[10] [14] [16]
11	Dongsup Kim	[2] [4]
12	Yuanwu Lei	[25]
13	Junfeng Li	[18]
14	Ming Li	[2] [4] [5] [6] [9] [11] [12] [19] [22] [24] [26]
15	Shuai Cheng Li	[19] [24] [26]
16	Guohui Lin (Guo-Hui Lin)	[1] [4]
17	Bin Ma	[6] [12]
18	Jianbo Qian	[19]
19	Rohit Singh	[15] [17] [21] [23]
20	Thomas Tang	[9]
21	Jianjun Wen	[1]
22	Fei Xia	[27]
23	Dong Xu	[1]
24	Ying Xu	[1] [2] [4] [5]
25	Libo Yu	[11]
26	Jing Zhang	[22]
27	Jie Zhou	[25]
28	Xingming Zhou	[18]

Colors in the list of coauthors