2008 | ||
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40 | EE | Takaki Makino, Toshihisa Takagi: On-line discovery of temporal-difference networks. ICML 2008: 632-639 |
39 | EE | Mihoko Otake, Toshihisa Takagi, Hajime Asama: Open brain simulator estimating internal state of human through external observation towards human biomechatronics. ICRA 2008: 1089-1093 |
2007 | ||
38 | EE | Wataru Iwasaki, Toshihisa Takagi: Reconstruction of highly heterogeneous gene-content evolution across the three domains of life. ISMB/ECCB (Supplement of Bioinformatics) 2007: 230-239 |
37 | EE | Asako Koike, Toshihisa Takagi: Knowledge discovery based on an implicit and explicit conceptual network. JASIST 58(1): 51-65 (2007) |
36 | EE | Yasunori Yamamoto, Toshihisa Takagi: Biomedical knowledge navigation by literature clustering. Journal of Biomedical Informatics 40(2): 114-130 (2007) |
2006 | ||
35 | EE | Tatsuya Kushida, Toshihisa Takagi, Ken-ichiro Fukuda: Event Ontology: A Pathway-Centric Ontology for Biological Processes. Pacific Symposium on Biocomputing 2006: 152-163 |
2005 | ||
34 | EE | Yasunori Yamamoto, Toshihisa Takagi: A Sentence Classification System for Multi Biomedical Literature Summarization. ICDE Workshops 2005: 1163 |
33 | EE | Asako Koike, Yoshiki Niwa, Toshihisa Takagi: Automatic extraction of gene/protein biological functions from biomedical text. Bioinformatics 21(7): 1227-1236 (2005) |
32 | EE | Kikuya Kato, Riu Yamashita, Ryo Matoba, Morito Monden, Shinzaburo Noguchi, Toshihisa Takagi, Kenta Nakai: Cancer gene expression database (CGED): a database for gene expression profiling with accompanying clinical information of human cancer tissues. Nucleic Acids Research 33(Database-Issue): 533-536 (2005) |
2004 | ||
31 | EE | Ken-ichiro Fukuda, Toshihisa Takagi: A Pathway Editor for Literature-based Knowledge Curation. APBC 2004: 339-344 |
30 | EE | Shinsuke Dohkan, Asako Koike, Toshihisa Takagi: Prediction of Protein-Protein Interactions Using Support Vector Machines. BIBE 2004: 576-586 |
29 | Yasunori Yamamoto, Toshihisa Takagi: A Practical Partial Parser for Biomedical Literature Summarization. NLUCS 2004: 75-85 | |
28 | EE | Goro Terai, Toshihisa Takagi: Predicting rules on organization of cis-regulatory elements, taking the order of elements into account. Bioinformatics 20(7): 1119-1128 (2004) |
27 | EE | Yutaka Suzuki, Riu Yamashita, Matsuyuki Shirota, Yuta Sakakibara, Joe Chiba, Junko Mizushima-Sugano, Alexander E. Kel, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Toshihisa Takagi, Kenta Nakai, Sumio Sugano: Large-scale collection and characterization of promoters of human and mouse genes. In Silico Biology 4: (2004) |
26 | EE | Asako Koike, Toshihisa Takagi: PRIME: automatically extracted PRotein Interactions and Molecular Information databas. In Silico Biology 5: (2004) |
25 | EE | Takako Takai-Igarashi, Toshihisa Takagi, Holger Michael, Edgar Wingender: Preface - Third "Ontology Workshop on Ontology and Genomes". In Silico Biology 5: (2004) |
2003 | ||
24 | EE | Tetsushi Yada, Yasushi Totoki, Y. Takaeda, Yasubumi Sakaki, Toshihisa Takagi: DIGIT: A Novel Gene Finding Program by Combining Gene-Finders. Pacific Symposium on Biocomputing 2003: 375-387 |
23 | EE | Hiroko Ao, Yasunori Yamamoto, Toshihisa Takagi: A Method to Retrieve Papers from MEDLINE: PETER System. TREC 2003: 806-809 |
22 | Natalia V. Poluliakh, Toshihisa Takagi, Kenta Nakai: MELINA: motif extraction from promoter regions of potentially co-regulated genes. Bioinformatics 19(3): 423-424 (2003) | |
21 | EE | Ken-ichiro Fukuda, Yuki Yamagata, Toshihisa Takagi: FREX: A query interface for biological processes with hierarchical and recursive structures. In Silico Biology 4: (2003) |
20 | EE | Takako Takai-Igarashi, Toshihisa Takagi, Edgar Wingender: Preface. In Silico Biology 4: (2003) |
2002 | ||
19 | Mika Hirakawa, Toshihiro Tanaka, Yoichi Hashimoto, Masako Kuroda, Toshihisa Takagi, Yusuke Nakamura: JSNP: a database of common gene variations in the Japanese population. Nucleic Acids Research 30(1): 158-162 (2002) | |
2001 | ||
18 | Takako Takai-Igarashi, Toshihisa Takagi: Ontology and functional genomics. German Conference on Bioinformatics 2001: 46 | |
17 | Toshihide Ono, Haretsugu Hishigaki, Akira Tanigami, Toshihisa Takagi: Automated extraction of information on protein-protein interactions from the biological literature. Bioinformatics 17(1): 155-161 (2001) | |
16 | Ken-ichiro Fukuda, Toshihisa Takagi: Knowledge representation of signal transduction pathways. Bioinformatics 17(9): 829-837 (2001) | |
2000 | ||
15 | Mikio Yoshida, Ken-ichiro Fukuda, Toshihisa Takagi: PNAD-CSS: a workbench for constructing a protein name abbreviation dictionary. Bioinformatics 16(2): 169-175 (2000) | |
1999 | ||
14 | EE | Tatsuhiko Tsunoda, Masao Fukagawa, Toshihisa Takagi: Time and Memory Efficient Algorithm for Extracting Palindromic and Repetitive Subsequences in Nucleic Acid Sequences. Pacific Symposium on Biocomputing 1999: 202-213 |
13 | Tatsuhiko Tsunoda, Toshihisa Takagi: Estimating transcription factor bindability on DNA. Bioinformatics 15(7): 622-630 (1999) | |
1997 | ||
12 | Yoshihiro Ohta, Yasunori Yamamoto, Tomoko Okazaki, Ikuo Uchiyama, Toshihisa Takagi: Automatic Construction of Knowledge Base from Biological Papers. ISMB 1997: 218-225 | |
11 | Kenji Satou, Toshihide Ono, Yoshihisa Yamamura, Emiko Furuichi, Satoru Kuhara, Toshihisa Takagi: Extraction of Substructures of Proteins Essential to their Biological Functions by a Data Mining Technique. ISMB 1997: 254-257 | |
10 | Y. Tsukamoto, Kyoko Takiguchi, Kenji Satou, Emiko Furuichi, Toshihisa Takagi, Satoru Kuhara: Application of a deductive database system to search for topological and similar three-dimensional structures in protein. Computer Applications in the Biosciences 13(2): 183-190 (1997) | |
1994 | ||
9 | Susumu Goto, Norihiro Sakamoto, Toshihisa Takagi: A Deductive Object-Oriented Language for Integrated Genome Databaser. HICSS (5) 1994: 108-110 | |
8 | Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Satoru Kuhara, Toshihisa Takagi: Application of a Deductive Database System PACADE toward Discovery of Clusters of Similar Structures in Proteins. HICSS (5) 1994: 160-170 | |
7 | Takahiko Suzuki, Toshihisa Takagi, Satoru Kuhara, Minoru Kanehisa: Development of an integrated Database for Genome Mapping and Nucleotide Sequences. HICSS (5) 1994: 68-76 | |
1993 | ||
6 | EE | Susumu Goto, Norihiro Sakamoto, Toshihisa Takagi: Object-Oriented Database with Rule-Based Query Interface for Genomic Computation. DASFAA 1993: 65-72 |
5 | Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Toshihisa Takagi, Satoru Kuhara: A deductive database system PACADE for analyzing 3-D and secondary structures of protein. Computer Applications in the Biosciences 9(3): 259-265 (1993) | |
4 | Norihiro Sakamoto, Toshihisa Takagi, Yasubumi Sakaki: Development of the Overlapping Oligonucleotide Database and its application to signal sequence search of the human genome. Computer Applications in the Biosciences 9(4): 427-434 (1993) | |
1990 | ||
3 | Neng-Fa Zhou, Toshihisa Takagi, Kazuo Ushijima: A Matching Tree Oriented Abstract Machine for Prolog. ICLP 1990: 159-173 | |
1985 | ||
2 | Toshihisa Takagi, Fumihiro Matsuo, Shouichi Futamura, Kazuo Ushijima: Implementation of Inferential Relational Database System. FODO 1985: 539-546 | |
1984 | ||
1 | Satoru Kuhara, Fumihiro Matsuo, Shouichi Futamura, A. Fujita, Takeshi Shinohara, Toshihisa Takagi, Yasubumi Sakaki: GENAS: a database system for nucleic acid sequence analysis. Nucleic Acids Research 12(1): 89-99 (1984) |