Volume 5,
2004
Special Issue:
Ontology Workshop Göttingen 2004
- Takako Takai-Igarashi, Toshihisa Takagi, Holger Michael, Edgar Wingender:
Preface - Third "Ontology Workshop on Ontology and Genomes".
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- Vivian Lee, Evelyn Camon, Emily Dimmer, Daniel Barrell, Rolf Apweiler:
GOA? - Use of Gene Ontology Annotation (GOA) for biological interpretation of '-omics' data and for validation of automatic annotation tools.
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- Asako Koike, Toshihisa Takagi:
PRIME: automatically extracted PRotein Interactions and Molecular Information databas.
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- Jasmin Saric, Lars Juhl Jensen, Isabel Rojas:
Large-scale extraction of gene regulation for model organisms in an ontological context.
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- Jacob Köhler, Christopher J. Rawlings, Paul Verrier, Rowan A. C. Mitchell, Andre Skusa, Alexander Rüegg, Stephan Philippi:
Linking experimental results, biological networks and sequence analysis methods using Ontologies and Generalized Data Structures.
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- Marie-Paule Lefranc, Oliver Clément, Quentin Kaas, Elodie Duprat, Patrick Chastellan, Isabelle Coelho, Kora Combres, Chantal Ginestoux, Véronique Giudicelli, Denys Chaume, Gérard Lefranc:
IMGT-Choreography for immunogenetics and immunoinformatics.
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- Holger Michael, Xin Chen, Ellen Fricke, Martin Haubrock, Remko Ricanek, Edgar Wingender:
Deriving an ontology for human gene expression sources from the CYTOMER? database on human organs and cell types.
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- Kenji Satou, Kaoru Yamamoto:
Utilizing weakly controlled vocabulary for sentence segmentation in biomedical literature.
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Special Issue:
Dagstuhl Seminar "Integrative Bioinformatics"
- Ralf Hofestädt:
Preface - Dagstuhl Seminar on Integrative Bioinformatics.
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- Eberhard O. Voit, Simeone Marino, Raman Lall:
Challenges for the identification of biological systems from in vivo time series data.
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- Ljudmilla Borisjuk, Mohammad-Reza Hajirezaei, Christian Klukas, Hardy Rolletschek, Falk Schreiber:
Integrating data from biological experiments into metabolic networks with the DBE information system.
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- Thomas Dandekar, Steffen Schmidt:
Metabolites, pathway flexibility.
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- Ming Chen, Ralf Hofestädt:
An algorithm for linear metabolic pathway alignment.
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- Ina Koch, Markus Schüler, Monika Heiner:
STEPP - Search Tool for Exploration of Petri net Paths: A new tool for Petri net-based path analysis in biochemical networks.
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- David S. Wishart, Robert Yang, David Arndt, Peter Tang, Joseph A. Cruz:
Dynamic cellular automata: a simple but powerful approach to cellular simulation.
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- Gordon Broderick, Melania Rúaini, Eugene Chan, Michael J. Ellison:
A life-like virtual cell membrane using discrete automata.
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- Manuela Pruess, Paul Kersey, Rolf Apweiler:
The Integr8 project - a resource for genomic and proteomic data.
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- Andrei L. Turinsky, Andrew C. Ah-Seng, Paul M. K. Gordon, Julie N. Stromer, Morgan L. Taschuk, Emily W. Xu, Christoph W. Sensen:
Bioinformatics visualization and integration with open standards: the Bluejay genomic browser.
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- Matteo Fattore, Patrizio Arrigo:
Knowledge Discovery and System Biology in molecular medicine: an application to neurodegenerative diseases.
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- Marylens Hernández Guía, Abel González Pérez, Vladimir Espinosa Angarica, Ana Tereza R. Vasconcelos, Julio Collado-Vides:
Complementing computationally predicted regulatory sites in Tractor_DB using a pattern matching approach.
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Further regular articles
Volume 5,
2005
- Angelica Lindlöf, Zelmina Lubovac:
Simulations of simple artificial genetic networks reveal features in the use of Relevance Networks.
Electronic Edition (link) BibTeX
- Jianbin Peng, Cheng-Han Huang, Mary K. Short, Paul T. Jubinsky:
Magmas gene structure and evolution.
Electronic Edition (link) BibTeX
- Alexander N. Gorban, Tatyana G. Popova, Andrei Yu. Zinovyev:
Four basic symmetry types in the universal 7-cluster structure of microbial genomic sequences.
Electronic Edition (link) BibTeX
- Alexandre G. de Brevern:
New assessment of a structural alphabet.
Electronic Edition (link) BibTeX
- Matthias Wolf, Joachim Friedrich, Thomas Dandekar, Tobias Müller:
CBCAnalyzer: inferring phylogenies based on compensatory base changes in RNA secondary structures.
Electronic Edition (link) BibTeX
- Steffen Möller, Eilhard Mix, Martin Blüggel, Pablo Serrano-Fernández, Dirk Koczan, Vasilis Kotsikoris, Manfred Kunz, Michael Watson, Jens Pahnke, Harald Illges, Michael Kreutzer, Stefan Mikkat, Hans-Jürgen Thiesen, Michael O. Glocker, Uwe K. Zettl, Saleh M. Ibrahim:
Collection of soluble variants of membrane proteins for transcriptomics and proteomics.
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- Jules J. Berman:
Nomenclature-based data retrieval without prior annotation: facilitating biomedical data integration with fast doublet matching.
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- Anton Dormer, Gregory Beck:
Evolutionary analysis of human vascular endothelial growth factor, angiopoietin, and tyrosine endothelial kinase involved in angiogenesis and immunity.
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- Rosario San Millán, Javier Garaizar, Joseba Bikandi:
In silico simulation of fingerprinting techniques based on double endonuclease digestion of genomic DNA.
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- Meena K. Sakharkar, Bagavathi S. Perumal, Kishore R. Sakharkar, Pandjassarame Kangueane:
An analysis on gene architecture in human and mouse genomes.
Electronic Edition (link) BibTeX
Copyright © Sun May 17 00:04:26 2009
by Michael Ley (ley@uni-trier.de)
