Satoru Kuhara

2006
35	EE	Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Kaori Yasuda, Cristin G. Print, Stephen D. Charnock-Jones, Deborah Sanders, Christopher J. Savoie, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Computational Strategy for Discovering Druggable Gene Networks from Genome-Wide RNA Expression Profiles. Pacific Symposium on Biocomputing 2006: 559-571
34	EE	Satoshi Niijima, Satoru Kuhara: Gene subset selection in kernel-induced feature space. Pattern Recognition Letters 27(16): 1884-1892 (2006)
2005
33	EE	Osamu Maruyama, Akiko Matsuda, Satoru Kuhara: Reconstructing Phylogenetic Trees of Prokaryote Genomes by Randomly Sampling Oligopeptides. International Conference on Computational Science (2) 2005: 911-918
32	EE	Osamu Maruyama, Akiko Matsuda, Satoru Kuhara: Reconstructing phylogenetic trees of prokaryote genomes by randomly sampling oligopeptides. IJBRA 1(4): 429-446 (2005)
31	EE	Satoshi Niijima, Satoru Kuhara: Multiclass Molecular Cancer Classification by Kernel Subspace Methods with Effective Kernel Parameter Selection. J. Bioinformatics and Computational Biology 3(5): 1071-1088 (2005)
2004
30	EE	Seiya Imoto, Tomoyuki Higuchi, Takao Goto, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Combining Microarrays and Biological Knowledge for Estimating Gene Networks via Bayesian Networks. J. Bioinformatics and Computational Biology 2(1): 77-98 (2004)
29	EE	Yukihiro Maki, Yoriko Takahashi, Yuji Arikawa, Shoji Watanabe, Ken Aoshima, Yukihiro Eguchi, Takanori Ueda, Sachiyo Aburatani, Satoru Kuhara, Masahiro Okamoto: An Integrated Comprehensive Workbench for Inferring Genetic Networks: voyagene. J. Bioinformatics and Computational Biology 2(3): 533-550 (2004)
2003
28	EE	Seiya Imoto, Tomoyuki Higuchi, Takao Goto, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Combining Microarrays and Biological Knowledge for Estimating Gene Networks via Bayesian Networks. CSB 2003: 104-113
27		Yoshinori Tamada, SunYong Kim, Hideo Bannai, Seiya Imoto, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Estimating gene networks from gene expression data by combining Bayesian network model with promoter element detection. ECCB 2003: 227-236
26	EE	Seiya Imoto, SunYong Kim, Takao Goto, Sachiyo Aburatani, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Bayesian Network and Nonparametric Heteroscedastic Regression for Nonlinear Modeling of Genetic Network. J. Bioinformatics and Computational Biology 1(2): 231-252 (2003)
25	EE	Seiya Imoto, Christopher J. Savoie, Sachiyo Aburatani, SunYong Kim, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Use of Gene Networks for Identifying and Validating Drug Targets. J. Bioinformatics and Computational Biology 1(3): 459-474 (2003)
24	EE	Sachiyo Aburatani, Satoru Kuhara, Hiroyuki Toh, Katsuhisa Horimoto: Deduction of a gene regulatory relationship framework from gene expression data by the application of graphical Gaussian modeling. Signal Processing 83(4): 777-788 (2003)
23	EE	Tatsuya Akutsu, Satoru Kuhara, Osamu Maruyama, Satoru Miyano: Identification of genetic networks by strategic gene disruptions and gene overexpressions under a boolean model. Theor. Comput. Sci. 1(298): 235-251 (2003)
22		Tatsuya Akutsu, Satoru Miyano, Satoru Kuhara: A simple greedy algorithm for finding functional relations: efficient implementation and average case analysis. Theor. Comput. Sci. 292(2): 481-495 (2003)
2002
21	EE	Seiya Imoto, SunYong Kim, Takao Goto, Sachiyo Aburatani, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Bayesian Network and Nonparametric Heteroscedastic Regression for Nonlinear Modeling of Genetic Network. CSB 2002: 219-227
20		Osamu Maruyama, Satoru Kuhara, Hideo Bannai, Satoru Miyano, Yoshinori Tamada: Fast Algorithm for Extracting Multiple Unordered Short Motifs Using Bit Operations. JCIS 2002: 1180-1185
19	EE	Osamu Maruyama, Hideo Bannai, Yoshinori Tamada, Satoru Kuhara, Satoru Miyano: Fast algorithm for extracting multiple unordered short motifs using bit operations. Inf. Sci. 146(1-4): 115-126 (2002)
2001
18	EE	Osamu Maruyama, Takayoshi Shoudai, Emiko Furuichi, Satoru Kuhara, Satoru Miyano: Learning Conformation Rules. Discovery Science 2001: 243-257
2000
17	EE	Tatsuya Akutsu, Satoru Miyano, Satoru Kuhara: A Simple Greedy Algorithm for Finding Functional Relations: Efficient Implementation and Average Case Anaylsis. Discovery Science 2000: 86-98
16	EE	Tatsuya Akutsu, Satoru Miyano, Satoru Kuhara: Algorithms for identifying Boolean networks and related biological networks based on matrix multiplication and fingerprint function. RECOMB 2000: 8-14
15		Tatsuya Akutsu, Satoru Miyano, Satoru Kuhara: Inferring qualitative relations in genetic networks and metabolic pathways. Bioinformatics 16(8): 727-734 (2000)
14		Tatsuya Akutsu, Satoru Miyano, Satoru Kuhara: Algorithms for Identifying Boolean Networks and Related Biological Networks Based on Matrix Multiplication and Fingerprint Function. Journal of Computational Biology 7(3-4): 331-343 (2000)
1999
13	EE	Tatsuya Akutsu, Satoru Miyano, Satoru Kuhara: Identification of Genetic Networks from a Small Number of Gene Expression Patterns Under the Boolean Network Model. Pacific Symposium on Biocomputing 1999: 17-28
12	EE	Christopher J. Savoie, Nobuhiro Kamikawaji, Takehiko Sasazuki, Satoru Kuhara: Use of Bonsai Decision Trees for the Identification of Potential MHC Class I Peptide Epitope Motifs. Pacific Symposium on Biocomputing 1999: 182-189
11		H. Hirakawa, S. Muta, Satoru Kuhara: The hydrophobic cores of proteins predicted by wavelet analysis. Bioinformatics 15(2): 141-148 (1999)
1998
10		Tatsuya Akutsu, Satoru Kuhara, Osamu Maruyama, Satoru Miyano: Identification of Gene Regulatory Networks by Strategic Gene Disruptions and Gene Overexpressions. SODA 1998: 695-702
1997
9		Kenji Satou, Toshihide Ono, Yoshihisa Yamamura, Emiko Furuichi, Satoru Kuhara, Toshihisa Takagi: Extraction of Substructures of Proteins Essential to their Biological Functions by a Data Mining Technique. ISMB 1997: 254-257
8		Y. Tsukamoto, Kyoko Takiguchi, Kenji Satou, Emiko Furuichi, Toshihisa Takagi, Satoru Kuhara: Application of a deductive database system to search for topological and similar three-dimensional structures in protein. Computer Applications in the Biosciences 13(2): 183-190 (1997)
1995
7		Takayoshi Shoudai, Michael Lappe, Satoru Miyano, Ayumi Shinohara, Takeo Okazaki, Setsuo Arikawa, Tomoyuki Uchida, Shinichi Shimozono, Takeshi Shinohara, Satoru Kuhara: BONSAI Garden: Parallel Knowledge Discovery System for Amino Acid Sequences. ISMB 1995: 359-358
1994
6		Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Satoru Kuhara, Toshihisa Takagi: Application of a Deductive Database System PACADE toward Discovery of Clusters of Similar Structures in Proteins. HICSS (5) 1994: 160-170
5		Takahiko Suzuki, Toshihisa Takagi, Satoru Kuhara, Minoru Kanehisa: Development of an integrated Database for Genome Mapping and Nucleotide Sequences. HICSS (5) 1994: 68-76
1993
4		Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Toshihisa Takagi, Satoru Kuhara: A deductive database system PACADE for analyzing 3-D and secondary structures of protein. Computer Applications in the Biosciences 9(3): 259-265 (1993)
3		Setsuo Arikawa, Satoru Miyano, Ayumi Shinohara, Satoru Kuhara, Yasuhito Mukouchi, Takeshi Shinohara: A Machine Discovery from Amino Acid Sequences by Decision Trees over Regular Patterns. New Generation Comput. 11(3): 361-375 (1993)
1992
2		Setsuo Arikawa, Satoru Kuhara, Satoru Miyano, Yasuhito Mukouchi, Ayumi Shinohara, Takeshi Shinohara: A Machine Discovery from Amino Acid Sequences by Decision Trees over Regular Patterns. FGCS 1992: 618-625
1984
1		Satoru Kuhara, Fumihiro Matsuo, Shouichi Futamura, A. Fujita, Takeshi Shinohara, Toshihisa Takagi, Yasubumi Sakaki: GENAS: a database system for nucleic acid sequence analysis. Nucleic Acids Research 12(1): 89-99 (1984)

Coauthor Index

1	Sachiyo Aburatani	[21] [24] [25] [26] [29]
2	Tatsuya Akutsu	[10] [13] [14] [15] [16] [17] [22] [23]
3	Ken Aoshima	[29]
4	Hiromitsu Araki	[35]
5	Setsuo Arikawa	[2] [3] [7]
6	Yuji Arikawa	[29]
7	Hideo Bannai	[19] [20] [27]
8	Stephen D. Charnock-Jones	[35]
9	Yukihiro Eguchi	[29]
10	A. Fujita	[1]
11	Emiko Furuichi	[4] [6] [8] [9] [18]
12	Shouichi Futamura	[1]
13	Takao Goto	[21] [26] [28] [30]
14	Tomoyuki Higuchi	[28] [30]
15	H. Hirakawa	[11]
16	Katsuhisa Horimoto	[24]
17	Seiya Imoto	[21] [25] [26] [27] [28] [30] [35]
18	Nobuhiro Kamikawaji	[12]
19	Minoru Kanehisa	[5]
20	SunYong Kim	[21] [25] [26] [27]
21	Michael Lappe	[7]
22	Yukihiro Maki	[29]
23	Osamu Maruyama	[10] [18] [19] [20] [23] [32] [33]
24	Akiko Matsuda	[32] [33]
25	Fumihiro Matsuo	[1]
26	Satoru Miyano	[2] [3] [7] [10] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [25] [26] [27] [28] [30] [35]
27	Yasuhito Mukouchi	[2] [3]
28	S. Muta	[11]
29	Satoshi Niijima	[31] [34]
30	Masahiro Okamoto	[29]
31	Takeo Okazaki	[7]
32	Toshihide Ono	[9]
33	Cristin G. Print	[35]
34	Yasubumi Sakaki	[1]
35	Deborah Sanders	[35]
36	Takehiko Sasazuki	[12]
37	Kenji Satou	[4] [6] [8] [9]
38	Christopher J. Savoie	[12] [25] [35]
39	Shinichi Shimozono	[7]
40	Ayumi Shinohara	[2] [3] [7]
41	Takeshi Shinohara	[1] [2] [3] [7]
42	Takayoshi Shoudai	[7] [18]
43	Takahiko Suzuki	[5]
44	Toshihisa Takagi	[1] [4] [5] [6] [8] [9]
45	Yoriko Takahashi	[29]
46	Kyoko Takiguchi	[4] [6] [8]
47	Yoshinori Tamada	[19] [20] [27] [35]
48	Kousuke Tashiro	[21] [25] [26] [27] [28] [30] [35]
49	Hiroyuki Toh	[24]
50	Y. Tsukamoto	[8]
51	Tomoyuki Uchida	[7]
52	Takanori Ueda	[29]
53	Shoji Watanabe	[29]
54	Yoshihisa Yamamura	[9]
55	Kaori Yasuda	[35]

Colors in the list of coauthors