2008 |
33 | EE | Guy Cochrane,
Ruth Akhtar,
Philippe Aldebert,
Nicola Althorpe,
Alastair Baldwin,
Kirsty Bates,
Sumit Bhattacharyya,
James K. Bonfield,
Lawrence Bower,
Paul Browne,
Matias Castro,
Tony Cox,
Fehmi Demiralp,
Ruth Eberhardt,
Nadeem Faruque,
Gemma Hoad,
Mikyung Jang,
Tamara Kulikova,
Alberto Labarga,
Rasko Leinonen,
Steven Leonard,
Quan Lin,
Rodrigo Lopez,
Dariusz Lorenc,
Hamish McWilliam,
Gaurab Mukherjee,
Francesco Nardone,
Sheila Plaister,
Stephen Robinson,
Siamak Sobhany,
Robert Vaughan,
Dan Wu,
Weimin Zhu,
Rolf Apweiler,
Tim J. P. Hubbard,
Ewan Birney:
Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database.
Nucleic Acids Research 36(Database-Issue): 5-12 (2008) |
2007 |
32 | EE | M. A. Larkin,
Gordon Blackshields,
N. P. Brown,
R. Chenna,
Paul A. McGettigan,
Hamish McWilliam,
Franck Valentin,
Iain M. Wallace,
Andreas Wilm,
Rodrigo Lopez,
Julie Dawn Thompson,
Toby J. Gibson,
Desmond G. Higgins:
Clustal W and Clustal X version 2.0.
Bioinformatics 23(21): 2947-2948 (2007) |
31 | EE | Tamara Kulikova,
Ruth Akhtar,
Philippe Aldebert,
Nicola Althorpe,
Mikael Andersson,
Alastair Baldwin,
Kirsty Bates,
Sumit Bhattacharyya,
Lawrence Bower,
Paul Browne,
Matias Castro,
Guy Cochrane,
Karyn Duggan,
Ruth Eberhardt,
Nadeem Faruque,
Gemma Hoad,
Carola Kanz,
Charles Lee,
Rasko Leinonen,
Quan Lin,
Vincent Lombard,
Rodrigo Lopez,
Dariusz Lorenc,
Hamish McWilliam,
Gaurab Mukherjee,
Francesco Nardone,
Maria Pilar Garcia Pastor,
Sheila Plaister,
Siamak Sobhany,
Peter Stoehr,
Robert Vaughan,
Dan Wu,
Weimin Zhu,
Rolf Apweiler:
EMBL Nucleotide Sequence Database in 2006.
Nucleic Acids Research 35(Database-Issue): 16-20 (2007) |
30 | EE | Nicola J. Mulder,
Rolf Apweiler,
Teresa K. Attwood,
Amos Bairoch,
Alex Bateman,
David Binns,
Peer Bork,
Virginie Buillard,
Lorenzo Cerutti,
Richard R. Copley,
Emmanuel Courcelle,
Ujjwal Das,
Louise Daugherty,
Mark Dibley,
Robert D. Finn,
Wolfgang Fleischmann,
Julian Gough,
Daniel H. Haft,
Nicolas Hulo,
Sarah Hunter,
Daniel Kahn,
Alexander Kanapin,
Anish Kejariwal,
Alberto Labarga,
Petra S. Langendijk-Genevaux,
David Lonsdale,
Rodrigo Lopez,
Ivica Letunic,
Martin Madera,
John Maslen,
Craig McAnulla,
Jennifer McDowall,
Jaina Mistry,
Alex Mitchell,
Anastasia N. Nikolskaya,
Sandra E. Orchard,
Christine A. Orengo,
Robert Petryszak,
Jeremy D. Selengut,
Christian J. A. Sigrist,
Paul D. Thomas,
Franck Valentin,
Derek Wilson,
Cathy H. Wu,
Corin Yeats:
New developments in the InterPro database.
Nucleic Acids Research 35(Database-Issue): 224-228 (2007) |
29 | EE | Alberto Labarga,
Franck Valentin,
Mikael Andersson,
Rodrigo Lopez:
Web Services at the European Bioinformatics Institute.
Nucleic Acids Research 35(Web-Server-Issue): 6-11 (2007) |
2006 |
28 | EE | Guy Cochrane,
Philippe Aldebert,
Nicola Althorpe,
Mikael Andersson,
Wendy Baker,
Alastair Baldwin,
Kirsty Bates,
Sumit Bhattacharyya,
Paul Browne,
Alexandra van den Broek,
Matias Castro,
Karyn Duggan,
Ruth Eberhardt,
Nadeem Faruque,
John Gamble,
Carola Kanz,
Tamara Kulikova,
Charles Lee,
Rasko Leinonen,
Quan Lin,
Vincent Lombard,
Rodrigo Lopez,
Michelle McHale,
Hamish McWilliam,
Gaurab Mukherjee,
Francesco Nardone,
Maria Pilar Garcia Pastor,
Siamak Sobhany,
Peter Stoehr,
Katerina Tzouvara,
Robert Vaughan,
Dan Wu,
Weimin Zhu,
Rolf Apweiler:
EMBL Nucleotide Sequence Database: developments in 2005.
Nucleic Acids Research 34(Database-Issue): 10-15 (2006) |
27 | EE | Cathy H. Wu,
Rolf Apweiler,
Amos Bairoch,
Darren A. Natale,
Winona C. Barker,
Brigitte Boeckmann,
Serenella Ferro,
Elisabeth Gasteiger,
Hongzhan Huang,
Rodrigo Lopez,
Michele Magrane,
Maria Jesus Martin,
Raja Mazumder,
Claire O'Donovan,
Nicole Redaschi,
Baris E. Suzek:
The Universal Protein Resource (UniProt): an expanding universe of protein information.
Nucleic Acids Research 34(Database-Issue): 187-191 (2006) |
2005 |
26 | EE | Amos Bairoch,
Rolf Apweiler,
Cathy H. Wu,
Winona C. Barker,
Brigitte Boeckmann,
Serenella Ferro,
Elisabeth Gasteiger,
Hongzhan Huang,
Rodrigo Lopez,
Michele Magrane,
María J. Martín,
Darren A. Natale,
Claire O'Donovan,
Nicole Redaschi,
Lai-Su L. Yeh:
The Universal Protein Resource (UniProt).
Nucleic Acids Research 33(Database-Issue): 154-159 (2005) |
25 | EE | Nicola J. Mulder,
Rolf Apweiler,
Teresa K. Attwood,
Amos Bairoch,
Alex Bateman,
David Binns,
Paul Bradley,
Peer Bork,
Phillip Bucher,
Lorenzo Cerutti,
Richard R. Copley,
Emmanuel Courcelle,
Ujjwal Das,
Richard Durbin,
Wolfgang Fleischmann,
Julian Gough,
Daniel H. Haft,
Nicola Harte,
Nicolas Hulo,
Daniel Kahn,
Alexander Kanapin,
Maria Krestyaninova,
David Lonsdale,
Rodrigo Lopez,
Ivica Letunic,
Martin Madera,
John Maslen,
Jennifer McDowall,
Alex Mitchell,
Anastasia N. Nikolskaya,
Sandra E. Orchard,
Marco Pagni,
Chris P. Ponting,
Emmanuel Quevillon,
Jeremy D. Selengut,
Christian J. A. Sigrist,
Ville Silventoinen,
David J. Studholme,
Robert Vaughan,
Cathy H. Wu:
InterPro, progress and status in 2005.
Nucleic Acids Research 33(Database-Issue): 201-205 (2005) |
24 | EE | Carola Kanz,
Philippe Aldebert,
Nicola Althorpe,
Wendy Baker,
Alastair Baldwin,
Kirsty Bates,
Paul Browne,
Alexandra van den Broek,
Matias Castro,
Guy Cochrane,
Karyn Duggan,
Ruth Eberhardt,
Nadeem Faruque,
John Gamble,
Federico Garcia Diez,
Nicola Harte,
Tamara Kulikova,
Quan Lin,
Vincent Lombard,
Rodrigo Lopez,
Renato Mancuso,
Michelle McHale,
Francesco Nardone,
Ville Silventoinen,
Siamak Sobhany,
Peter Stoehr,
Mary Ann Tuli,
Katerina Tzouvara,
Robert Vaughan,
Dan Wu,
Weimin Zhu,
Rolf Apweiler:
The EMBL Nucleotide Sequence Database.
Nucleic Acids Research 33(Database-Issue): 29-33 (2005) |
23 | EE | Emmanuel Quevillon,
Ville Silventoinen,
Sharmila Pillai,
Nicola Harte,
Nicola J. Mulder,
Rolf Apweiler,
Rodrigo Lopez:
InterProScan: protein domains identifier.
Nucleic Acids Research 33(Web-Server-Issue): 116-120 (2005) |
22 | EE | Sharmila Pillai,
Ville Silventoinen,
Kimmo Kallio,
M. Senger,
Siamak Sobhany,
John G. Tate,
Samir S. Velankar,
Adel Golovin,
Kim Henrick,
P. Rice,
Peter Stoehr,
Rodrigo Lopez:
SOAP-based services provided by the European Bioinformatics Institute.
Nucleic Acids Research 33(Web-Server-Issue): 25-28 (2005) |
2004 |
21 | EE | Rasko Leinonen,
Federico Garcia Diez,
David Binns,
Wolfgang Fleischmann,
Rodrigo Lopez,
Rolf Apweiler:
UniProt archive.
Bioinformatics 20(17): 3236-3237 (2004) |
20 | | Rolf Apweiler,
Amos Bairoch,
Cathy H. Wu,
Winona C. Barker,
Brigitte Boeckmann,
Serenella Ferro,
Elisabeth Gasteiger,
Hongzhan Huang,
Rodrigo Lopez,
Michele Magrane,
Maria Jesus Martin,
Darren A. Natale,
Claire O'Donovan,
Nicole Redaschi,
Lai-Su L. Yeh:
UniProt: the Universal Protein knowledgebase.
Nucleic Acids Research 32(Database-Issue): 115-119 (2004) |
19 | | Evelyn Camon,
Michele Magrane,
Daniel Barrell,
Vivian Lee,
Emily Dimmer,
John Maslen,
David Binns,
Nicola Harte,
Rodrigo Lopez,
Rolf Apweiler:
The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology.
Nucleic Acids Research 32(Database-Issue): 262-266 (2004) |
18 | | Tamara Kulikova,
Philippe Aldebert,
Nicola Althorpe,
Wendy Baker,
Kirsty Bates,
Paul Browne,
Alexandra van den Broek,
Guy Cochrane,
Karyn Duggan,
Ruth Eberhardt,
Nadeem Faruque,
Maria Garcia-Pastor,
Nicola Harte,
Carola Kanz,
Rasko Leinonen,
Quan Lin,
Vincent Lombard,
Rodrigo Lopez,
Renato Mancuso,
Michelle McHale,
Francesco Nardone,
Ville Silventoinen,
Peter Stoehr,
Guenter Stoesser,
Mary Ann Tuli,
Katerina Tzouvara,
Robert Vaughan,
Dan Wu,
Weimin Zhu,
Rolf Apweiler:
The EMBL Nucleotide Sequence Database.
Nucleic Acids Research 32(Database-Issue): 27-30 (2004) |
17 | | Nicola Harte,
Ville Silventoinen,
Emmanuel Quevillon,
Stephen Robinson,
Kimmo Kallio,
Xavier Fustero,
Pravin Patel,
Petteri Jokinen,
Rodrigo Lopez:
Public web-based services from the European Bioinformatics Institute.
Nucleic Acids Research 32(Web-Server-Issue): 3-9 (2004) |
2003 |
16 | | Rodrigo Lopez,
Stephen Robinson,
Asif Kibria,
Nicola Harte,
Gulam Patel,
Rob Harper,
Emmanuel Quevillon,
Ville Silventoinen,
Kimmo Kallio,
Petteri Jokinen:
The European Bioinformatics Institute web site: a new view.
Bioinformatics 19(4): 546-547 (2003) |
15 | | Rodrigo Lopez,
Karyn Duggan,
Nicola Harte,
Asif Kibria:
Public services from the European Bioinformatics Institute.
Briefings in Bioinformatics 4(4): 332-340 (2003) |
14 | | Guenter Stoesser,
Wendy Baker,
Alexandra van den Broek,
Maria Garcia-Pastor,
Carola Kanz,
Tamara Kulikova,
Rasko Leinonen,
Quan Lin,
Vincent Lombard,
Rodrigo Lopez,
Renato Mancuso,
Francesco Nardone,
Peter Stoehr,
Mary Ann Tuli,
Katerina Tzouvara,
Robert Vaughan:
The EMBL Nucleotide Sequence Database: major new developments.
Nucleic Acids Research 31(1): 17-22 (2003) |
13 | | Nicola J. Mulder,
Rolf Apweiler,
Terri K. Attwood,
Amos Bairoch,
Daniel Barrell,
Alex Bateman,
David Binns,
Margaret Biswas,
Paul Bradley,
Peer Bork,
Philipp Bucher,
Richard R. Copley,
Emmanuel Courcelle,
Ujjwal Das,
Richard Durbin,
Laurent Falquet,
Wolfgang Fleischmann,
Sam Griffiths-Jones,
Daniel H. Haft,
Nicola Harte,
Nicolas Hulo,
Daniel Kahn,
Alexander Kanapin,
Maria Krestyaninova,
Rodrigo Lopez,
Ivica Letunic,
David Lonsdale,
Ville Silventoinen,
Sandra E. Orchard,
Marco Pagni,
David Peyruc,
Chris P. Ponting,
Jeremy D. Selengut,
Florence Servant,
Christian J. A. Sigrist,
Robert Vaughan,
Evgeni M. Zdobnov:
The InterPro Database, 2003 brings increased coverage and new features.
Nucleic Acids Research 31(1): 315-318 (2003) |
12 | | Catherine Brooksbank,
Evelyn Camon,
Midori A. Harris,
Michele Magrane,
Maria Jesus Martin,
Nicola J. Mulder,
Claire O'Donovan,
Helen E. Parkinson,
Mary Ann Tuli,
Rolf Apweiler,
Ewan Birney,
Alvis Brazma,
Kim Henrick,
Rodrigo Lopez,
Guenter Stoesser,
Peter Stoehr,
Graham Cameron:
The European Bioinformatics Institute's data resources.
Nucleic Acids Research 31(1): 43-50 (2003) |
11 | | Chenna Ramu,
Hideaki Sugawara,
Tadashi Koike,
Rodrigo Lopez,
Toby J. Gibson,
Desmond G. Higgins,
Julie Dawn Thompson:
Multiple sequence alignment with the Clustal series of programs.
Nucleic Acids Research 31(13): 3497-3500 (2003) |
10 | | Rodrigo Lopez,
Ville Silventoinen,
Stephen Robinson,
Asif Kibria,
Warren Gish:
WU-Blast2 server at the European Bioinformatics Institute.
Nucleic Acids Research 31(13): 3795-3798 (2003) |
2002 |
9 | | Evgeni M. Zdobnov,
Rodrigo Lopez,
Rolf Apweiler,
Thure Etzold:
The EBI SRS server-recent developments.
Bioinformatics 18(2): 368-373 (2002) |
8 | | Evgeni M. Zdobnov,
Rodrigo Lopez,
Rolf Apweiler,
Thure Etzold:
The EBI SRS server-new features.
Bioinformatics 18(8): 1149-1150 (2002) |
7 | | Nicola J. Mulder,
Rolf Apweiler,
Terri K. Attwood,
Amos Bairoch,
Alex Bateman,
David Binns,
Margaret Biswas,
Paul Bradley,
Peer Bork,
Philipp Bucher,
Richard R. Copley,
Emmanuel Courcelle,
Richard Durbin,
Laurent Falquet,
Wolfgang Fleischmann,
Jérôme Gouzy,
Sam Griffiths-Jones,
Daniel H. Haft,
Henning Hermjakob,
Nicolas Hulo,
Daniel Kahn,
Alexander Kanapin,
Maria Krestyaninova,
Rodrigo Lopez,
Ivica Letunic,
Sue Orchard,
Marco Pagni,
David Peyruc,
Chris P. Ponting,
Florence Servant,
Christian J. A. Sigrist:
InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites
Briefings in Bioinformatics 3(3): 225-235 (2002) |
6 | | Guenter Stoesser,
Wendy Baker,
Alexandra van den Broek,
Evelyn Camon,
Maria Garcia-Pastor,
Carola Kanz,
Tamara Kulikova,
Rasko Leinonen,
Quan Lin,
Vincent Lombard,
Rodrigo Lopez,
Nicole Redaschi,
Peter Stoehr,
Mary Ann Tuli,
Katerina Tzouvara,
Robert Vaughan:
The EMBL Nucleotide Sequence Database.
Nucleic Acids Research 30(1): 21-26 (2002) |
2001 |
5 | | Guenter Stoesser,
Wendy Baker,
Alexandra van den Broek,
Evelyn Camon,
Maria Garcia-Pastor,
Carola Kanz,
Tamara Kulikova,
Vincent Lombard,
Rodrigo Lopez,
Helen E. Parkinson,
Nicole Redaschi,
Peter Sterk,
Peter Stoehr,
Mary Ann Tuli:
The EMBL nucleotide sequence database.
Nucleic Acids Research 29(1): 17-21 (2001) |
4 | | Rolf Apweiler,
Terri K. Attwood,
Amos Bairoch,
Alex Bateman,
Ewan Birney,
Margaret Biswas,
Philipp Bucher,
Lorenzo Cerutti,
Florence Corpet,
Michael D. R. Croning,
Richard Durbin,
Laurent Falquet,
Wolfgang Fleischmann,
Jérôme Gouzy,
Henning Hermjakob,
Nicolas Hulo,
Inge Jonassen,
Daniel Kahn,
Alexander Kanapin,
Youla Karavidopoulou,
Rodrigo Lopez,
Beate Marx,
Nicola J. Mulder,
Thomas M. Oinn,
Marco Pagni,
Florence Servant,
Christian J. A. Sigrist,
Evgeni M. Zdobnov:
The InterPro database, an integrated documentation resource for protein families, domains and functional sites.
Nucleic Acids Research 29(1): 37-40 (2001) |
2000 |
3 | | Evgeni M. Zdobnov,
Rodrigo Lopez,
Rolf Apweiler,
Thure Etzold:
The EBI SRS Server: Recent Developments.
German Conference on Bioinformatics 2000: 139-148 |
2 | | Rolf Apweiler,
Terri K. Attwood,
Amos Bairoch,
Alex Bateman,
Ewan Birney,
Margaret Biswas,
Philipp Bucher,
Lorenzo Cerutti,
Florence Corpet,
Michael D. R. Croning,
Richard Durbin,
Laurent Falquet,
Wolfgang Fleischmann,
Jérôme Gouzy,
Henning Hermjakob,
Nicolas Hulo,
Inge Jonassen,
Daniel Kahn,
Alexander Kanapin,
Youla Karavidopoulou,
Rodrigo Lopez,
Beate Marx,
Nicola J. Mulder,
Thomas M. Oinn,
Marco Pagni,
Florence Servant,
Christian J. A. Sigrist,
Evgeni M. Zdobnov:
InterPro-an integrated documentation resource for protein families, domains and functional sites.
Bioinformatics 16(12): 1145-1150 (2000) |
1999 |
1 | | Guenter Stoesser,
Mary Ann Tuli,
Rodrigo Lopez,
Peter Sterk:
The EMBL Nucleotide Sequence Database.
Nucleic Acids Research 27(1): 18-24 (1999) |