Raja Mazumder

2008
13	EE	C. Zhang, Oswald Crasta, S. Cammer, Rebecca Will, Ron Kenyon, D. Sullivan, Q. Yu, W. Sun, R. Jha, D. Liu, Tian Xue, Y. Zhang, M. Moore, Peter B. McGarvey, Hongzhan Huang, Yongxing Chen, J. Zhang, Raja Mazumder, Cathy H. Wu, Bruno W. S. Sobral: An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data. Nucleic Acids Research 36(Database-Issue): 884-891 (2008)
2007
12	EE	Baris E. Suzek, Hongzhan Huang, Peter B. McGarvey, Raja Mazumder, Cathy H. Wu: UniRef: comprehensive and non-redundant UniProt reference clusters. Bioinformatics 23(10): 1282-1288 (2007)
2006
11	EE	Cathy H. Wu, Rolf Apweiler, Amos Bairoch, Darren A. Natale, Winona C. Barker, Brigitte Boeckmann, Serenella Ferro, Elisabeth Gasteiger, Hongzhan Huang, Rodrigo Lopez, Michele Magrane, Maria Jesus Martin, Raja Mazumder, Claire O'Donovan, Nicole Redaschi, Baris E. Suzek: The Universal Protein Resource (UniProt): an expanding universe of protein information. Nucleic Acids Research 34(Database-Issue): 187-191 (2006)
2005
10	EE	Raja Mazumder, Darren A. Natale, Sudhir Murthy, Rathi Thiagarajan, Cathy H. Wu: Computational identification of strain-, species- and genus-specific proteins. BMC Bioinformatics 6: 279 (2005)
2004
9	EE	Srikanth Celamkoti, Sashidhara Kundeti, Anjan Purkayastha, Raja Mazumder, Charles Buck, Donald Seto: GeneOrder3.0: Software for comparing the order of genes in pairs of small bacterial genomes. BMC Bioinformatics 5: 52 (2004)
8		Cathy H. Wu, Anastasia N. Nikolskaya, Hongzhan Huang, Lai-Su L. Yeh, Darren A. Natale, C. R. Vinayaka, Zhang-Zhi Hu, Raja Mazumder, Sandeep Kumar, Panagiotis Kourtesis, Robert S. Ledley, Baris E. Suzek, Leslie Arminski, Yongxing Chen, Jian Zhang, Jorge Louie Cardenas, Sehee Chung, Jorge Castro-Alvear, Georgi Dinkov, Winona C. Barker: PIRSF: family classification system at the Protein Information Resource. Nucleic Acids Research 32(Database-Issue): 112-114 (2004)
2003
7	EE	Roman L. Tatusov, Natalie D. Fedorova, John D. Jackson, Aviva R. Jacobs, Boris Kiryutin, Eugene V. Koonin, Dmitri M. Krylov, Raja Mazumder, Sergei L. Mekhedov, Anastasia N. Nikolskaya, B. Sridhar Rao, Sergei Smirnov, Alexander V. Sverdlov, Sona Vasudevan, Yuri I. Wolf, Jodie J. Yin, Darren A. Natale: The COG database: an updated version includes eukaryotes. BMC Bioinformatics 4: 41 (2003)
6		Aron Marchler-Bauer, John B. Anderson, Carol DeWeese-Scott, Natalie D. Fedorova, Lewis Y. Geer, Siqian He, David I. Hurwitz, John D. Jackson, Aviva R. Jacobs, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Thomas Madej, Gabriele H. Marchler, Raja Mazumder, Anastasia N. Nikolskaya, Anna R. Panchenko, Bachoti S. Rao, Benjamin A. Shoemaker, Vahan Simonyan, James S. Song, Paul A. Thiessen, Sona Vasudevan, Yanli Wang, Roxanne A. Yamashita, Jodie J. Yin, Stephen H. Bryant: CDD: a curated Entrez database of conserved domain alignments. Nucleic Acids Research 31(1): 383-387 (2003)
5		Jie Chen, John B. Anderson, Carol DeWeese-Scott, Natalie D. Fedorova, Lewis Y. Geer, Siqian He, David I. Hurwitz, John D. Jackson, Aviva R. Jacobs, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Thomas Madej, Aron Marchler-Bauer, Gabriele H. Marchler, Raja Mazumder, Anastasia N. Nikolskaya, Bachoti S. Rao, Anna R. Panchenko, Benjamin A. Shoemaker, Vahan Simonyan, James S. Song, Paul A. Thiessen, Sona Vasudevan, Yanli Wang, Roxanne A. Yamashita, Jodie J. Yin, Stephen H. Bryant: MMDB: Entrez's 3D-structure database. Nucleic Acids Research 31(1): 474-477 (2003)
2002
4		Nikhat Zafar, Raja Mazumder, Donald Seto: Application of Global Computational Tools GeneOrder and OrthologLocator to the Comparative Analyses of Chordopoxvirus Genomes. JCIS 2002: 1186-1192
3	EE	Nikhat Zafar, Raja Mazumder, Donald Seto: CoreGenes: A computational tool for identifying and cataloging "core" genes in a set of small genomes. BMC Bioinformatics 3: 12 (2002)
2	EE	Nikhat Zafar, Raja Mazumder, Donald Seto: Application of global computational tools GeneOrder and CoreGenes to the comparative analyses of chordopoxvirus genomes. Inf. Sci. 146(1-4): 127-135 (2002)
2001
1		Raja Mazumder, Ashok S. Kolaskar, Donald Seto: GeneOrder: comparing the order of genes in small genomes. Bioinformatics 17(1): 162-166 (2001)

Coauthor Index

1	John B. Anderson	[5] [6]
2	Rolf Apweiler	[11]
3	Leslie Arminski	[8]
4	Amos Bairoch	[11]
5	Winona C. Barker	[8] [11]
6	Brigitte Boeckmann	[11]
7	Stephen H. Bryant	[5] [6]
8	Charles Buck	[9]
9	S. Cammer	[13]
10	Jorge Louie Cardenas	[8]
11	Jorge Castro-Alvear	[8]
12	Srikanth Celamkoti	[9]
13	Jie Chen	[5]
14	Yongxing Chen	[8] [13]
15	Sehee Chung	[8]
16	Oswald Crasta	[13]
17	Carol DeWeese-Scott	[5] [6]
18	Georgi Dinkov	[8]
19	Natalie D. Fedorova	[5] [6] [7]
20	Serenella Ferro	[11]
21	Elisabeth Gasteiger	[11]
22	Lewis Y. Geer	[5] [6]
23	Siqian He	[5] [6]
24	Zhang-Zhi Hu	[8]
25	Hongzhan Huang	[8] [11] [12] [13]
26	David I. Hurwitz	[5] [6]
27	John D. Jackson	[5] [6] [7]
28	Aviva R. Jacobs	[5] [6] [7]
29	R. Jha	[13]
30	Ron Kenyon	[13]
31	Boris Kiryutin	[7]
32	Ashok S. Kolaskar	[1]
33	Eugene V. Koonin	[7]
34	Panagiotis Kourtesis	[8]
35	Dmitri M. Krylov	[7]
36	Sandeep Kumar	[8]
37	Sashidhara Kundeti	[9]
38	Christopher J. Lanczycki	[5] [6]
39	Robert S. Ledley	[8]
40	Cynthia A. Liebert	[5] [6]
41	Chunlei Liu	[5] [6]
42	D. Liu	[13]
43	Rodrigo Lopez	[11]
44	Thomas Madej	[5] [6]
45	Michele Magrane	[11]
46	Gabriele H. Marchler	[5] [6]
47	Aron Marchler-Bauer	[5] [6]
48	Maria Jesus Martin	[11]
49	Peter B. McGarvey	[12] [13]
50	Sergei L. Mekhedov	[7]
51	M. Moore	[13]
52	Sudhir Murthy	[10]
53	Darren A. Natale	[7] [8] [10] [11]
54	Anastasia N. Nikolskaya	[5] [6] [7] [8]
55	Claire O'Donovan	[11]
56	Anna R. Panchenko	[5] [6]
57	Anjan Purkayastha	[9]
58	B. Sridhar Rao	[7]
59	Bachoti S. Rao	[5] [6]
60	Nicole Redaschi	[11]
61	Donald Seto	[1] [2] [3] [4] [9]
62	Benjamin A. Shoemaker	[5] [6]
63	Vahan Simonyan	[5] [6]
64	Sergei Smirnov	[7]
65	Bruno W. S. Sobral	[13]
66	James S. Song	[5] [6]
67	D. Sullivan	[13]
68	W. Sun	[13]
69	Baris E. Suzek	[8] [11] [12]
70	Alexander V. Sverdlov	[7]
71	Roman L. Tatusov	[7]
72	Rathi Thiagarajan	[10]
73	Paul A. Thiessen	[5] [6]
74	Sona Vasudevan	[5] [6] [7]
75	C. R. Vinayaka	[8]
76	Yanli Wang	[5] [6]
77	Rebecca Will	[13]
78	Yuri I. Wolf	[7]
79	Cathy H. Wu	[8] [10] [11] [12] [13]
80	Tian Xue	[13]
81	Roxanne A. Yamashita	[5] [6]
82	Lai-Su L. Yeh	[8]
83	Jodie J. Yin	[5] [6] [7]
84	Q. Yu	[13]
85	Nikhat Zafar	[2] [3] [4]
86	C. Zhang	[13]
87	J. Zhang	[13]
88	Jian Zhang	[8]
89	Y. Zhang	[13]

Colors in the list of coauthors