2008 | ||
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11 | EE | Sushama Michael, Gilles Travé, Chenna Ramu, Claudia Chica, Toby J. Gibson: Discovery of candidate KEN-box motifs using Cell Cycle keyword enrichment combined with native disorder prediction and motif conservation. Bioinformatics 24(4): 453-457 (2008) |
10 | EE | Francesca Diella, Cathryn M. Gould, Claudia Chica, Allegra Via, Toby J. Gibson: Phospho.ELM: a database of phosphorylation sites - update 2008. Nucleic Acids Research 36(Database-Issue): 240-244 (2008) |
2007 | ||
9 | EE | M. A. Larkin, Gordon Blackshields, N. P. Brown, R. Chenna, Paul A. McGettigan, Hamish McWilliam, Franck Valentin, Iain M. Wallace, Andreas Wilm, Rodrigo Lopez, Julie Dawn Thompson, Toby J. Gibson, Desmond G. Higgins: Clustal W and Clustal X version 2.0. Bioinformatics 23(21): 2947-2948 (2007) |
2004 | ||
8 | EE | Francesca Diella, Scott Cameron, Christine Gemünd, Rune Linding, Allegra Via, Bernhard Küster, Thomas Sicheritz-Pontén, Nikolaj Blom, Toby J. Gibson: Phospho.ELM: A database of experimentally verified phosphorylation sites in eukaryotic proteins. BMC Bioinformatics 5: 79 (2004) |
2003 | ||
7 | Chenna Ramu, Hideaki Sugawara, Tadashi Koike, Rodrigo Lopez, Toby J. Gibson, Desmond G. Higgins, Julie Dawn Thompson: Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Research 31(13): 3497-3500 (2003) | |
6 | Pål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson: ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Research 31(13): 3625-3630 (2003) | |
5 | Rune Linding, Robert B. Russell, Victor Neduva, Toby J. Gibson: GlobPlot: exploring protein sequences for globularity and disorder. Nucleic Acids Research 31(13): 3701-3708 (2003) | |
4 | Konstantinos Bimpikis, Aidan Budd, Rune Linding, Toby J. Gibson: BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases. Nucleic Acids Research 31(13): 3792-3794 (2003) | |
2000 | ||
3 | Chenna Ramu, Christine Gemünd, Toby J. Gibson: Object-oriented parsing of biological databases with Python. Bioinformatics 16(7): 628-638 (2000) | |
1994 | ||
2 | Julie Dawn Thompson, Desmond G. Higgins, Toby J. Gibson: Improved sensitivity of profile searches through the use of sequence weights and gap excision. Computer Applications in the Biosciences 10(1): 19-29 (1994) | |
1 | Toby J. Gibson, Julie Dawn Thompson: Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases. Nucleic Acids Research 22(13): 2552-2556 (1994) |