2008 |
11 | EE | Sushama Michael,
Gilles Travé,
Chenna Ramu,
Claudia Chica,
Toby J. Gibson:
Discovery of candidate KEN-box motifs using Cell Cycle keyword enrichment combined with native disorder prediction and motif conservation.
Bioinformatics 24(4): 453-457 (2008) |
10 | EE | Francesca Diella,
Cathryn M. Gould,
Claudia Chica,
Allegra Via,
Toby J. Gibson:
Phospho.ELM: a database of phosphorylation sites - update 2008.
Nucleic Acids Research 36(Database-Issue): 240-244 (2008) |
2007 |
9 | EE | M. A. Larkin,
Gordon Blackshields,
N. P. Brown,
R. Chenna,
Paul A. McGettigan,
Hamish McWilliam,
Franck Valentin,
Iain M. Wallace,
Andreas Wilm,
Rodrigo Lopez,
Julie Dawn Thompson,
Toby J. Gibson,
Desmond G. Higgins:
Clustal W and Clustal X version 2.0.
Bioinformatics 23(21): 2947-2948 (2007) |
2004 |
8 | EE | Francesca Diella,
Scott Cameron,
Christine Gemünd,
Rune Linding,
Allegra Via,
Bernhard Küster,
Thomas Sicheritz-Pontén,
Nikolaj Blom,
Toby J. Gibson:
Phospho.ELM: A database of experimentally verified phosphorylation sites in eukaryotic proteins.
BMC Bioinformatics 5: 79 (2004) |
2003 |
7 | | Chenna Ramu,
Hideaki Sugawara,
Tadashi Koike,
Rodrigo Lopez,
Toby J. Gibson,
Desmond G. Higgins,
Julie Dawn Thompson:
Multiple sequence alignment with the Clustal series of programs.
Nucleic Acids Research 31(13): 3497-3500 (2003) |
6 | | Pål Puntervoll,
Rune Linding,
Christine Gemünd,
Sophie Chabanis-Davidson,
Morten Mattingsdal,
Scott Cameron,
David M. A. Martin,
Gabriele Ausiello,
Barbara Brannetti,
Anna Costantini,
Fabrizio Ferrè,
Vincenza Maselli,
Allegra Via,
Gianni Cesareni,
Francesca Diella,
Giulio Superti-Furga,
Lucjan Stanislaw Wyrwicz,
Chenna Ramu,
Caroline McGuigan,
Rambabu Gudavalli,
Ivica Letunic,
Peer Bork,
Leszek Rychlewski,
Bernhard Küster,
Manuela Helmer-Citterich,
William N. Hunter,
Rein Aasland,
Toby J. Gibson:
ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins.
Nucleic Acids Research 31(13): 3625-3630 (2003) |
5 | | Rune Linding,
Robert B. Russell,
Victor Neduva,
Toby J. Gibson:
GlobPlot: exploring protein sequences for globularity and disorder.
Nucleic Acids Research 31(13): 3701-3708 (2003) |
4 | | Konstantinos Bimpikis,
Aidan Budd,
Rune Linding,
Toby J. Gibson:
BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases.
Nucleic Acids Research 31(13): 3792-3794 (2003) |
2000 |
3 | | Chenna Ramu,
Christine Gemünd,
Toby J. Gibson:
Object-oriented parsing of biological databases with Python.
Bioinformatics 16(7): 628-638 (2000) |
1994 |
2 | | Julie Dawn Thompson,
Desmond G. Higgins,
Toby J. Gibson:
Improved sensitivity of profile searches through the use of sequence weights and gap excision.
Computer Applications in the Biosciences 10(1): 19-29 (1994) |
1 | | Toby J. Gibson,
Julie Dawn Thompson:
Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases.
Nucleic Acids Research 22(13): 2552-2556 (1994) |