Julie D. Thompson
List of publications from the
2007 |
14 | EE | M. A. Larkin,
Gordon Blackshields,
N. P. Brown,
R. Chenna,
Paul A. McGettigan,
Hamish McWilliam,
Franck Valentin,
Iain M. Wallace,
Andreas Wilm,
Rodrigo Lopez,
Julie Dawn Thompson,
Toby J. Gibson,
Desmond G. Higgins:
Clustal W and Clustal X version 2.0.
Bioinformatics 23(21): 2947-2948 (2007) |
2006 |
13 | EE | Nicolas Garnier,
A. Friedrich,
Raphael Bolze,
Emmanuel Bettler,
Luc Moulinier,
Christophe Geourjon,
Julie Dawn Thompson,
Gilbert Deléage,
Olivier Poch:
MAGOS: multiple alignment and modelling server.
Bioinformatics 22(17): 2164-2165 (2006) |
2005 |
12 | EE | Frédéric Chalmel,
Aurélie Lardenois,
Julie Dawn Thompson,
Jean Muller,
José-Alain Sahel,
Thierry Léveillard,
Olivier Poch:
GOAnno: GO annotation based on multiple alignment.
Bioinformatics 21(9): 2095-2096 (2005) |
11 | EE | Laurent Bianchetti,
Julie Dawn Thompson,
Odile Lecompte,
Frédéric Plewniak,
Olivier Poch:
Valid: Validation of Protein Sequence Quality Based on Multiple Alignment Data.
J. Bioinformatics and Computational Biology 3(4): 929-948 (2005) |
2003 |
10 | | Julie Dawn Thompson,
Jean-Claude Thierry,
Olivier Poch:
RASCAL: Rapid Scanning and Correction of Multiple Sequence Alignments.
Bioinformatics 19(9): 1155-1161 (2003) |
9 | | Chenna Ramu,
Hideaki Sugawara,
Tadashi Koike,
Rodrigo Lopez,
Toby J. Gibson,
Desmond G. Higgins,
Julie Dawn Thompson:
Multiple sequence alignment with the Clustal series of programs.
Nucleic Acids Research 31(13): 3497-3500 (2003) |
8 | | Frédéric Plewniak,
Laurent Bianchetti,
Yann Brelivet,
Annaick Carles,
Frédéric Chalmel,
Odile Lecompte,
Thiebaut Mochel,
Luc Moulinier,
Arnaud Muller,
Jean Muller,
Veronique Prigent,
Raymond Ripp,
Jean-Claude Thierry,
Julie Dawn Thompson,
Nicolas Wicker,
Olivier Poch:
PipeAlign: a new toolkit for protein family analysis.
Nucleic Acids Research 31(13): 3829-3832 (2003) |
2001 |
7 | | Anne Bahr,
Julie Dawn Thompson,
Jean-Claude Thierry,
Olivier Poch:
BAliBASE (Benchmark Alignment dataBASE): enhancements for repeats, transmembrane sequences and circular permutations.
Nucleic Acids Research 29(1): 323-326 (2001) |
2000 |
6 | | Frédéric Plewniak,
Julie Dawn Thompson,
Olivier Poch:
Ballast: Blast post-processing based on locally conserved segments.
Bioinformatics 16(9): 750-759 (2000) |
1999 |
5 | | Julie Dawn Thompson,
Frédéric Plewniak,
Olivier Poch:
BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs.
Bioinformatics 15(1): 87-88 (1999) |
4 | | Julie Dawn Thompson,
Frédéric Plewniak,
Olivier Poch:
A comprehensive comparison of multiple sequence alignment programs.
Nucleic Acids Research 27(13): 2682-2690 (1999) |
1995 |
3 | | Julie Dawn Thompson:
Introducing variable gap penalties to sequence alignment in linear space.
Computer Applications in the Biosciences 11(2): 181-186 (1995) |
1994 |
2 | | Julie Dawn Thompson,
Desmond G. Higgins,
Toby J. Gibson:
Improved sensitivity of profile searches through the use of sequence weights and gap excision.
Computer Applications in the Biosciences 10(1): 19-29 (1994) |
1 | | Toby J. Gibson,
Julie Dawn Thompson:
Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases.
Nucleic Acids Research 22(13): 2552-2556 (1994) |