12. PSB 2007:
Wailea,
Maui,
Hawaii,
USA
Russ B. Altman, A. Keith Dunker, Lawrence Hunter, Tiffany Murray, Teri E. Klein (Eds.):
Biocomputing 2007, Proceedings of the Pacific Symposium, Maui, Hawaii, USA, 3-7 January 2007.
World Scientific 2007, ISBN 981-270-417-5 BibTeX
Protein Interactions and Disease
- Maricel G. Kann, Yanay Ofran, Marco Punta, Predrag Radivojac:
Session Introduction.
1-3
Electronic Edition (link) BibTeX
- Karsten M. Borgwardt, Hans-Peter Kriegel:
Graph Kernels For Disease Outcome Prediction From Protein-Protein Interaction Networks.
4-15
Electronic Edition (link) BibTeX
- Daniel L. Cook, Jesse C. Wiley, John H. Gennari:
Chalkboard: Ontology-Based Pathway Modeling And Qualitative Inference Of Disease Mechanisms.
16-27
Electronic Edition (link) BibTeX
- Graciela Gonzalez, Juan C. Uribe, Luis Tari, Colleen Brophy, Chitta Baral:
Mining Gene-Disease Relationships from Biomedical Literature: Weighting Proteinprotein Interactions and Connectivity.
28-39
Electronic Edition (link) BibTeX
- Peter M. Kasson, Vijay S. Pande:
Predicting Structure and Dynamics of Loosely-Ordered Protein Complexes: Influenza Hemagglutinin Fusion Peptide.
40-50
Electronic Edition (link) BibTeX
- Libusha Kelly, Rachel Karchin, Andrej Sali:
Protein Interactions and Disease Phenotypes in the ABC Transporter Superfamily.
51-63
Electronic Edition (link) BibTeX
- Vinay Pulim, Jadwiga R. Bienkowska, Bonnie Berger:
Lthreader: Prediction of Ligand-Receptor Interactions Using Localized Threading.
64-75
Electronic Edition (link) BibTeX
- Lee Sam, Yang Liu, Jianrong Li, Carol Friedman, Yves A. Lussier:
Discovery of Protein Interaction Networks Shared by Diseases.
76-87
Electronic Edition (link) BibTeX
- Padmavati Sridhar, Tamer Kahveci, Sanjay Ranka:
An Iterative Algorithm for Metabolic Network-Based Drug Target Identification.
88-99
Electronic Edition (link) BibTeX
- Willy Valdivia Granda, Maricel G. Kann, Jose Malaga:
Transcriptional Interactions During Smallpox Infection and Identification of Early Infection Biomarkers.
100-111
Electronic Edition (link) BibTeX
Computational Approaches To Metabolomics
- David S. Wishart, Russell Greiner:
Session Introduction.
112-114
Electronic Edition (link) BibTeX
- David Chang, Aalim Weljie, Jack Newton:
Leveraging Latent Information In NMR For Robust Predictive Models.
115-126
Electronic Edition (link) BibTeX
- Natarajan Ganesan, Bala Kalyanasundaram, Mahe Velauthapllai:
Bioinformatics Data Profiling Tools: A Prelude to Metabolic Profiling.
127-132
Electronic Edition (link) BibTeX
- Emre Karakoç, Süleyman Cenk Sahinalp, Artem Cherkasov:
Comparative QSAR Analysis of Bacterial-, Fungalplant- and Human Metabolites.
133-144
Electronic Edition (link) BibTeX
- Craig Knox, Savita Shrivastava, Paul Stothard, Roman Eisner, David S. Wishart:
Biospider: A Web Server for Automating Metabolome Annotations.
145-156
Electronic Edition (link) BibTeX
- John L. Markley, Mark E. Anderson, Qiu Cui, Hamid Eghbalnia, Ian A. Lewis, Adrian D. Hegeman, Jing Li, Christopher F. Schulte, Michael R. Sussman, William M. Westler, Eldon L. Ulrich, Zsolt Zolnai:
New Bioinformatics Resources For Metabolomics.
157-168
Electronic Edition (link) BibTeX
- Martin Scholz, Oliver Fiehn:
Setup X - A Public Study Design Database for Metabolomic Projects.
169-180
Electronic Edition (link) BibTeX
- Chen Yang, Adam D. Richardson, Jeffrey W. Smith, Andrei Osterman:
Comparative Metabolomics of Breast Cancer.
181-192
Electronic Edition (link) BibTeX
- Jeongah Yoon, Kyongbum Lee:
Metabolic Flux Profiling of Reaction Modules in Liver Drug Transformation.
193-204
Electronic Edition (link) BibTeX
New Frontiers In Biomedical Text Mining
- Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, K. Bretonnel Cohen:
Session Introduction.
205-208
Electronic Edition (link) BibTeX
- Caroline B. Ahlers, Marcelo Fiszman, Dina Demner-Fushman, François-Michel Lang, Thomas C. Rindflesch:
Extracting Semantic Predications from Medline Citations for Pharmacogenomics.
209-220
Electronic Edition (link) BibTeX
- Ali Cakmak, Gultekin Özsoyoglu:
Annotating Genes Using Textual Patterns.
221-232
Electronic Edition (link) BibTeX
- Helen L. Johnson, K. Bretonnel Cohen, Lawrence Hunter:
A Fault Model for Ontology Mapping, Alignment, and Linking Systems.
233-268
Electronic Edition (link) BibTeX
- Nikiforos Karamanis, Ian Lewin, Ruth Sealy, Rachel Drysdaley, Edward Briscoe:
Integrating Natural Language Processing with Flybase Curation.
245-256
Electronic Edition (link) BibTeX
- Zhenzhen Kou, William W. Cohen, Robert F. Murphy:
A Stacked Graphical Model for Associating Sub-Images with Sub-Captions.
257-268
Electronic Edition (link) BibTeX
- Zhiyong Lu, K. Bretonnel Cohen, Lawrence Hunter:
Generif Quality Assurance as Summary Revision.
269-280
Electronic Edition (link) BibTeX
- Alexander A. Morgan, Benjamin Wellner, Jeffrey B. Colombe, Robert Arens, Marc E. Colosimo, Lynette Hirschman:
Evaluating the Automatic Mapping of Human Gene and Protein Mentions to Unique Identifiers.
281-291
Electronic Edition (link) BibTeX
- Aurélie Névéol, Sonya E. Shooshan, Susanne M. Humphrey, Thomas C. Rindflesch, Alan R. Aronson:
Multiple Approaches to Fine-Grained Indexing of the Biomedical Literature.
292-303
Electronic Edition (link) BibTeX
- James Rhodes, Stephen Boyer, Jeffrey T. Kreulen, Ying Chen, Patricia Ordonez:
Mining Patents Using Molecular Similarity Search.
304-315
Electronic Edition (link) BibTeX
- Kazuhiro Seki, Javed Mostafa:
Discovering Implicit Associations Between Genes and Hereditary Diseases.
316-327
Electronic Edition (link) BibTeX
- Hong Yu, David Kaufman:
A Cognitive Evaluation of Four Online Search Engines for Answering Definitional Questions Posed by Physicians.
328-339
Electronic Edition (link) BibTeX
Biodiversity Informatics:
Managing Knowledge Beyond Humans And Model Organisms
- Indra Neil Sarkar:
Session Introduction.
340-342
Electronic Edition (link) BibTeX
- Eithon Cadag, Brenton Louie, Peter J. Myler, Peter Tarczy-Hornoch:
Biomediator Data Integration and Inference for Functional Annotation of Anonymous Sequences.
343-354
Electronic Edition (link) BibTeX
- Gregory Hampikian, Tim Andersen:
Absent Sequences: Nullomers and Primes.
355-366
Electronic Edition (link) BibTeX
- Anne M. Maglia, Jennifer L. Leopold, L. Anal'a Pugener, Susan Gauch:
An Anatomical Ontology for Amphibians.
367-378
Electronic Edition (link) BibTeX
- David M. Ng, Marcos H. Woehrmann, Joshua M. Stuart:
Recommending Pathway Genes Using a Compendium of Clustering Solutions.
379-390
Electronic Edition (link) BibTeX
- Guido Sautter, Klemens Böhm, Donat Agosti:
Semi-Automated XML Markup of Biosystematic Legacy Literature with the Goldengate Editor.
391-402
Electronic Edition (link) BibTeX
Computational Proteomics:
High-Throughput Analysis For Systems Biology
- William R. Cannon, Bobbie-Jo M. Webb-Robertson:
Session Introduction.
403-408
Electronic Edition (link) BibTeX
- Pedro Alves, Randy J. Arnold, Milos V. Novotny, Predrag Radivojac, James P. Reilly, Haixu Tang:
Advancement in Protein Inference from Shotgun Proteomics Using Peptide Detectability.
409-420
Electronic Edition (link) BibTeX
- Yan Fu, Wen Gao, Simin He, Ruixiang Sun, Hu Zhou, Rong Zeng:
Mining Tandem Mass Spectral Data to Develop a More Accurate Mass Error Model for Peptide Identification.
421-432
Electronic Edition (link) BibTeX
- Sonia M. Leach, Aaron Gabow, Lawrence Hunter, Debra Goldberg:
Assessing and Combining Reliability of Protein Interaction Sources.
433-444
Electronic Edition (link) BibTeX
- David Sontag, Rohit Singh, Bonnie Berger:
Probabilistic Modeling of Systematic Errors in Two-Hybrid Experiments.
445-457
Electronic Edition (link) BibTeX
- Raf Van de Plas, Fabian Ojeda, Maarten Dewil, Ludo Van Den Bosch, Bart De Moor, Etienne Waelkens:
Prospective Exploration of Biochemical Tissue Composition via Imaging Mass Spectrometry Guided by Principal Component Analysis.
458-469
Electronic Edition (link) BibTeX
DNA-Protein Interactions:
Integrating Structure,
Sequence,
and Function
Copyright © Sat May 16 23:35:20 2009
by Michael Ley (ley@uni-trier.de)
