| 2008 |
| 16 | EE | Raheleh Salari,
Alexander Schönhuth,
Fereydoun Hormozdiari,
Artem Cherkasov,
Süleyman Cenk Sahinalp:
The Relation between Indel Length and Functional Divergence: A Formal Study.
WABI 2008: 330-341 |
| 2007 |
| 15 | EE | Emre Karakoç,
Süleyman Cenk Sahinalp,
Artem Cherkasov:
Comparative QSAR Analysis of Bacterial-, Fungalplant- and Human Metabolites.
Pacific Symposium on Biocomputing 2007: 133-144 |
| 14 | EE | Christopher D. Fjell,
Robert E. W. Hancock,
Artem Cherkasov:
AMPer: a database and an automated discovery tool for antimicrobial peptides.
Bioinformatics 23(9): 1148-1155 (2007) |
| 13 | EE | Emre Karakoç,
Artem Cherkasov,
Süleyman Cenk Sahinalp:
Novel approaches for small biomolecule classification and structural similarity search.
SIGKDD Explorations 9(1): 14-21 (2007) |
| 2006 |
| 12 | EE | Emre Karakoç,
Artem Cherkasov,
Süleyman Cenk Sahinalp:
Distance based algorithms for small biomolecule classification and structural similarity search.
ISMB (Supplement of Bioinformatics) 2006: 243-251 |
| 11 | EE | Yvonne Y. Li,
Steven J. M. Jones,
Artem Cherkasov:
Selective Targeting of Indel-inferred Differences in Spatial Structures of Homologous Proteins.
J. Bioinformatics and Computational Biology 4(2): 403-414 (2006) |
| 10 | EE | Artem Cherkasov:
Can 'Bacterial-Metabolite-Likeness' Model Improve Odds of 'in Silico' Antibiotic Discovery?.
Journal of Chemical Information and Modeling 46(3): 1214-1222 (2006) |
| 2005 |
| 9 | EE | Artem Cherkasov,
Zheng Shi,
Yvonne Y. Li,
Steven J. M. Jones,
Magid Fallahi,
Geoffrey L. Hammond:
'Inductive' Charges on Atoms in Proteins: Comparative Docking with the Extended Steroid Benchmark Set and Discovery of a Novel SHBG Ligand.
Journal of Chemical Information and Modeling 45(6): 1842-1853 (2005) |
| 2004 |
| 8 | EE | Artem Cherkasov,
Shannan J. Ho Sui,
Robert C. Brunham,
Steven J. M. Jones:
Structural characterization of genomes by large scale sequence-structure threading: application of reliability analysis in structural genomics.
BMC Bioinformatics 5: 101 (2004) |
| 7 | EE | Michael Hsing,
Joel L. Bellenson,
Conor Shankey,
Artem Cherkasov:
Modeling of cell signaling pathways in macrophages by semantic networks.
BMC Bioinformatics 5: 156 (2004) |
| 6 | EE | Artem Cherkasov,
Steven J. M. Jones:
Structural characterization of genomes by large scale sequence-structure threading.
BMC Bioinformatics 5: 37 (2004) |
| 5 | EE | Artem Cherkasov,
Steven J. M. Jones:
An approach to large scale identification of non-obvious structural similarities between proteins.
BMC Bioinformatics 5: 61 (2004) |
| 2003 |
| 4 | EE | Artem Cherkasov:
Inductive Electronegativity Scale. Iterative Calculation of Inductive Partial Charges.
Journal of Chemical Information and Computer Sciences 43(6): 2039-2047 (2003) |
| 2000 |
| 3 | EE | Artem Cherkasov,
Mats Jonsson:
A New Method for Estimation of Homolytic C-H Bond Dissociation Enthalpies.
Journal of Chemical Information and Computer Sciences 40(5): 1222-1226 (2000) |
| 1999 |
| 2 | EE | Artem Cherkasov,
Mats Jonsson:
Substituent Effects on Thermochemical Properties of C-, N-, O-, and S-Centered Radicals. Physical Interpretation of Substituent Effects.
Journal of Chemical Information and Computer Sciences 39(6): 1057-1063 (1999) |
| 1998 |
| 1 | EE | Artem Cherkasov,
Mats Jonsson:
Substituent Effects on Thermochemical Properties of Free Radicals. New Substituent Scales for C-Centered Radicals.
Journal of Chemical Information and Computer Sciences 38(6): 1151-1156 (1998) |