Robert F. Murphy

2008
34		Mourad Elloumi, Josef Küng, Michal Linial, Robert F. Murphy, Kristan Schneider, Cristian Toma: Bioinformatics Research and Development, Second International Conference, BIRD 2008, Vienna, Austria, July 7-9, 2008, Proceedings Springer 2008
33	EE	Luís Pedro Coelho, Robert F. Murphy: Identifying Subcellular Locations from Images of Unknown Resolution. BIRD 2008: 235-242
32	EE	Estelle Glory, Justin Newberg, Robert F. Murphy: Automated comparison of protein subcellular location patterns between images of normal and cancerous tissues. ISBI 2008: 304-307
31	EE	Robert F. Murphy: Automated proteome-wide determination of subcellular location using high throughput microscopy. ISBI 2008: 308-311
30	EE	Gustavo K. Rohde, Wei Wang, Tao Peng, Robert F. Murphy: Deformation-based nonlinear dimension reduction: Applications to nuclear morphometry. ISBI 2008: 500-503
29	EE	Yuntao Qian, Robert F. Murphy: Improved recognition of figures containing fluorescence microscope images in online journal articles using graphical models. Bioinformatics 24(4): 569-576 (2008)
2007
28	EE	Xiang Chen, Robert F. Murphy: Interpretation of Protein Subcellular Location Patterns in 3D Images Across Cell Types and Resolutions. BIRD 2007: 328-342
27	EE	Charles Jackson, Robert F. Murphy, Jelena Kovacevic: Efficient Acquisition and Learning of Fluorescence Microscope Data Models. ICIP (6) 2007: 245-248
26	EE	Robert F. Murphy: Systematic Description of Subcellular Location for Integration with Proteomics Databases and Systems Biology Modeling. ISBI 2007: 1052-1055
25	EE	Juchang Hua, Orhan N. Ayasli, William W. Cohen, Robert F. Murphy: Identifying Fluorescence Microscope Images in Online Journal Articles Using Both Image and Text Features. ISBI 2007: 1224-1227
24	EE	Shann-Ching Chen, Ting Zhao, Geoffrey J. Gordon, Robert F. Murphy: Automated image analysis of protein localization in budding yeast. ISMB/ECCB (Supplement of Bioinformatics) 2007: 66-71
23	EE	Zhenzhen Kou, William W. Cohen, Robert F. Murphy: A Stacked Graphical Model for Associating Sub-Images with Sub-Captions. Pacific Symposium on Biocomputing 2007: 257-268
2006
22	EE	Shann-Ching Chen, Ting Zhao, Geoffrey J. Gordon, Robert F. Murphy: A Novel Graphical Model Approach to Segmenting Cell Images. CIBCB 2006: 1-8
21	EE	Yanhua Hu, Jesus Carmona, Robert F. Murphy: Application of temporal texture features to automated analysis of protein subcellular locations in time series fluorescence microscope images. ISBI 2006: 1028-1031
20	EE	Shann-Ching Chen, Geoffrey J. Gordon, Robert F. Murphy: A novel approximate inference approach to automated classification of protein subcellular location patterns in multi-cell images. ISBI 2006: 558-561
19	EE	Ting Zhao, Stalia Soto, Robert F. Murphy: Improved comparison of protein subcellular location patterns. ISBI 2006: 562-565
18	EE	Lionel Coulot, Heather Kirschner, Amina Chebira, José M. F. Moura, Jelena Kovacevic, Elvira Garcia Osuna, Robert F. Murphy: Topology preserving STACS segmentation of protein subcellular location images. ISBI 2006: 566-569
17	EE	Shann-Ching Chen, Robert F. Murphy: A graphical model approach to automated classification of protein subcellular location patterns in multi-cell images. BMC Bioinformatics 7: 90 (2006)
2005
16	EE	Zhenzhen Kou, William W. Cohen, Robert F. Murphy: High-recall protein entity recognition using a dictionary. ISMB (Supplement of Bioinformatics) 2005: 266-273
15	EE	Robert F. Murphy, Christos Faloutsos: Research issues in protein location image databases. SIGMOD Conference 2005: 966-967
14		Kai Huang, Robert F. Murphy: Data Mining Methods for a Systematics of Protein Subcellular Location. Data Mining in Bioinformatics 2005: 143-187
13	EE	T. Zhao, Meel Velliste, Michael V. Boland, Robert F. Murphy: Object Type Recognition for Automated Analysis of Protein Subcellular Location. IEEE Transactions on Image Processing 14(9): 1351-1359 (2005)
2004
12		Kai Huang, Robert F. Murphy: Automated Classification of Subcellular Patterns In Multicell Images Without Segmentation Into Single Cells. ISBI 2004: 1139-1142
11		Robert F. Murphy: Automated Interpretation of Subcellular Location Patterns. ISBI 2004: 53-56
10	EE	Kai Huang, Robert F. Murphy: Boosting accuracy of automated classification of fluorescence microscope images for location proteomics. BMC Bioinformatics 5: 78 (2004)
9	EE	A. K. Singh, B. S. Manjunath, Robert F. Murphy: A Distributed Database for BioMolecular Images. SIGMOD Record 33(2): 65-71 (2004)
2003
8	EE	Zhenzhen Kou, William W. Cohen, Robert F. Murphy: Extracting information from text and images for location proteomics. BIOKDD 2003: 2-9
7	EE	William W. Cohen, Richard C. Wang, Robert F. Murphy: Understanding captions in biomedical publications. KDD 2003: 499-504
6	EE	Robert F. Murphy, Meel Velliste, Gregory Porreca: Robust Numerical Features for Description and Classification of Subcellular Location Patterns in Fluorescence Microscope Images. VLSI Signal Processing 35(3): 311-321 (2003)
2002
5	EE	Kai Huang, Jennifer Lin, James A. Gajnak, Robert F. Murphy: Image content-based retrieval and automated interpretation of fluorescence microscope images via the protein subcellular location image database. ISBI 2002: 325-328
4	EE	Meel Velliste, Robert F. Murphy: Automated determination of protein subcellular locations from 3D fluorescence microscope images. ISBI 2002: 867-870
2001
3		Robert F. Murphy, Meel Velliste, Jie Yao, Gregory Porreca: Searching Online Journals for Fluorescence Microscope Images Depicting Protein Subcellular Location Patterns. BIBE 2001: 119-128
2		Michael V. Boland, Robert F. Murphy: A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells. Bioinformatics 17(12): 1213-1223 (2001)
2000
1		Robert F. Murphy, Michael V. Boland, Meel Velliste: Towards a Systematics for Protein Subcellular Location: Quantitative Description of Protein Localization Patterns and Automated Analysis of Fluorescence Microscope Images. ISMB 2000: 251-259

Coauthor Index

1	Orhan N. Ayasli	[25]
2	Michael V. Boland	[1] [2] [13]
3	Jesus Carmona	[21]
4	Amina Chebira	[18]
5	Shann-Ching Chen	[17] [20] [22] [24]
6	Xiang Chen	[28]
7	Luís Pedro Coelho	[33]
8	William W. Cohen	[7] [8] [16] [23] [25]
9	Lionel Coulot	[18]
10	Mourad Elloumi	[34]
11	Christos Faloutsos	[15]
12	James A. Gajnak	[5]
13	Estelle Glory	[32]
14	Geoffrey J. Gordon	[20] [22] [24]
15	Yanhua Hu	[21]
16	Juchang Hua	[25]
17	Kai Huang	[5] [10] [12] [14]
18	Charles Jackson	[27]
19	Heather Kirschner	[18]
20	Zhenzhen Kou	[8] [16] [23]
21	Jelena Kovacevic	[18] [27]
22	Josef Küng	[34]
23	Jennifer Lin	[5]
24	Michal Linial	[34]
25	B. S. Manjunath	[9]
26	José M. F. Moura	[18]
27	Justin Newberg	[32]
28	Elvira Garcia Osuna	[18]
29	Tao Peng	[30]
30	Gregory Porreca	[3] [6]
31	Yuntao Qian	[29]
32	Gustavo K. Rohde	[30]
33	Kristan Schneider	[34]
34	A. K. Singh	[9]
35	Stalia Soto	[19]
36	Cristian Toma	[34]
37	Meel Velliste	[1] [3] [4] [6] [13]
38	Richard C. Wang	[7]
39	Wei Wang	[30]
40	Jie Yao	[3]
41	T. Zhao	[13]
42	Ting Zhao	[19] [22] [24]

Colors in the list of coauthors