| 2007 |
| 8 | EE | Emre Karakoç,
Süleyman Cenk Sahinalp,
Artem Cherkasov:
Comparative QSAR Analysis of Bacterial-, Fungalplant- and Human Metabolites.
Pacific Symposium on Biocomputing 2007: 133-144 |
| 7 | EE | Cagri Aksay,
Raheleh Salari,
Emre Karakoç,
Can Alkan,
Süleyman Cenk Sahinalp:
taveRNA: a web suite for RNA algorithms and applications.
Nucleic Acids Research 35(Web-Server-Issue): 325-329 (2007) |
| 6 | EE | Emre Karakoç,
Artem Cherkasov,
Süleyman Cenk Sahinalp:
Novel approaches for small biomolecule classification and structural similarity search.
SIGKDD Explorations 9(1): 14-21 (2007) |
| 2006 |
| 5 | EE | Emre Karakoç,
Artem Cherkasov,
Süleyman Cenk Sahinalp:
Distance based algorithms for small biomolecule classification and structural similarity search.
ISMB (Supplement of Bioinformatics) 2006: 243-251 |
| 4 | EE | Can Alkan,
Emre Karakoç,
Süleyman Cenk Sahinalp,
Peter J. Unrau,
H. Alexander Ebhardt,
Kaizhong Zhang,
Jeremy Buhler:
RNA Secondary Structure Prediction Via Energy Density Minimization.
RECOMB 2006: 130-142 |
| 3 | EE | Can Alkan,
Emre Karakoç,
Joseph H. Nadeau,
Süleyman Cenk Sahinalp,
Kaizhong Zhang:
RNA-RNA Interaction Prediction and Antisense RNA Target Search.
Journal of Computational Biology 13(2): 267-282 (2006) |
| 2005 |
| 2 | EE | Can Alkan,
Emre Karakoç,
Joseph H. Nadeau,
Süleyman Cenk Sahinalp,
Kaizhong Zhang:
RNA-RNA Interaction Prediction and Antisense RNA Target Search.
RECOMB 2005: 152-171 |
| 2004 |
| 1 | EE | Emre Karakoç,
Z. Meral Özsoyoglu,
Süleyman Cenk Sahinalp,
Murat Tasan,
Xiang Zhang:
Novel Approaches to Biomolecular Sequence Indexing.
IEEE Data Eng. Bull. 27(3): 40-47 (2004) |