4. CSB 2005:
Stanford,
CA,
USA
Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference (CSB 2005), 8-11 August 2005, Stanford, CA, USA.
IEEE Computer Society 2005, ISBN 0-7695-2344-7 BibTeX
Introduction
Keynote Address
Invited Talks
Genomics
- Zheng Yun, Kwoh Chee Keong:
Identifying Simple Discriminatory Gene Vectors with an Information Theory Approach.
13-24
Electronic Edition (link) BibTeX
- Xutao Deng, Huimin Geng, Hesham H. Ali:
Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks.
25-34
Electronic Edition (link) BibTeX
- Benjamin G. Jackson, Srinivas Aluru, Patrick S. Schnable:
Consensus Genetic Maps: A Graph Theoretic Approach.
35-43
Electronic Edition (link) BibTeX
- Sun Kim, Jeong-Hyeon Choi, Jiong Yang:
Gene Teams with Relaxed Proximity Constraint.
44-55
Electronic Edition (link) BibTeX
- Anantharaman Kalyanaraman, Srinivas Aluru:
Efficient Algorithms and Software for Detection of Full-Length LTR Retrotransposons.
56-64
Electronic Edition (link) BibTeX
- Roded Sharan, Bjarni V. Halldórsson, Sorin Istrail:
Islands of Tractability for Parsimony Haplotyping.
65-72
Electronic Edition (link) BibTeX
- Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu:
Accurate Prediction of Orthologous Gene Groups in Microbes.
73-79
Electronic Edition (link) BibTeX
- Vered Kunik, Zach Solan, Shimon Edelman, Eytan Ruppin, David Horn:
Motif Extraction and Protein Classification.
80-85
Electronic Edition (link) BibTeX
- Yuji Kawada, Yasubumi Sakakibara:
Discriminative Discovery of Transcription Factor Binding Sites from Location Data.
86-89
Electronic Edition (link) BibTeX
Phylogeny and Evolution
Transcriptomes
- Sun-Yuan Kung, Man-Wai Mak, Ilias Tagkopoulos:
Multi-Metric and Multi-Substructure Biclustering Analysis for Gene Expression Data.
123-134
Electronic Edition (link) BibTeX
- Anya Tsalenko, Roded Sharan, Hege Edvardsen, Vessela Kristensen, Anne-Lise Børresen-Dale, Amir Ben-Dor, Zohar Yakhini:
Analysis of SNP-Expression Association Matrices.
135-143
Electronic Edition (link) BibTeX
- Will Sheffler, Eli Upfal, John Sedivy, William Stafford Noble:
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays.
144-154
Electronic Edition (link) BibTeX
Proteomics
Structural Bioinformatics
- Lincong Wang, Bruce Randall Donald:
An Efficient and Accurate Algorithm for Assigning Nuclear Overhauser Effect Restraints Using a Rotamer Library Ensemble and Residual Dipolar Couplings.
189-202
Electronic Edition (link) BibTeX
- Zhong Chen, Ying Xu:
Multi-Scale Hierarchical Structure Prediction of Helical Transmembrane Proteins.
203-207
Electronic Edition (link) BibTeX
- Peter M. Kasson, Mark M. Davis, Axel T. Brünger:
Deformable Modeling for Improved Calculation of Molecular Velocities from Single-Particle Tracking.
208-211
Electronic Edition (link) BibTeX
- Feng Gao, Mohammed Javeed Zaki:
PSIST: Indexing Protein Structures Using Suffix Trees.
212-222
Electronic Edition (link) BibTeX
- Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fangfang Pan, Liming Cai:
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes.
223-234
Electronic Edition (link) BibTeX
- Lincong Wang, Ramgopal R. Mettu, Bruce Randall Donald:
An Algebraic Geometry Approach to Protein Structure Determination from NMR Data.
235-246
Electronic Edition (link) BibTeX
- Jinbo Xu, Feng Jiao, Bonnie Berger:
A Tree-Decomposition Approach to Protein Structure Prediction.
247-256
Electronic Edition (link) BibTeX
Pathways and Networks
Applied Bioinformatic
- Tu Minh Phuong, Zhen Lin, Russ B. Altman:
Choosing SNPs Using Feature Selection.
301-309
Electronic Edition (link) BibTeX
- Haifeng Li, Keshu Zhang, Tao Jiang:
Robust and Accurate Cancer Classification with Gene Expression Profiling.
310-321
Electronic Edition (link) BibTeX
- Gabriela Alexe, Gyan Bhanot, Babu Venkataraghavan, Ramakrishna Ramaswamy, Jorge Lepre, Arnold J. Levine, Gustavo Stolovitzky:
A Robust Meta-classification Strategy for Cancer Diagnosis from Gene Expression Data.
322-325
Electronic Edition (link) BibTeX
Data Mining and Ontology
- Chengyong Yang, Erliang Zeng, Tao Li, Giri Narasimhan:
Clustering Genes Using Gene Expression and Text Literature Data.
329-340
Electronic Edition (link) BibTeX
- Susan L. Havre, Bobbie-Jo M. Webb-Robertson, Anuj R. Shah, Christian Posse, Banu Gopalan, Fred J. Brockman:
Bioinformatic Insights from Metagenomics through Visualization.
341-350
Electronic Edition (link) BibTeX
- Rui Mao, Weijia Xu, Smriti R. Ramakrishnan, Glen Nuckolls, Daniel P. Miranker:
On Optimizing Distance-Based Similarity Search for Biological Databases.
351-361
Electronic Edition (link) BibTeX
- Mohammed I. Rafiq, Martin J. O'Connor, Amar K. Das:
Computational Method for Temporal Pattern Discovery in Biomedical Genomic Databases.
362-365
Electronic Edition (link) BibTeX
- Nalini Polavarapu, Shamkant B. Navathe, Ramprasad Ramnarayanan, Abrar ul Haque, Saurav Sahay, Ying Liu:
Investigation into Biomedical Literature Classification Using Support Vector Machines.
366-374
Electronic Edition (link) BibTeX
Miscellaneous
Workshop Abstracts
Copyright © Sat May 16 23:03:57 2009
by Michael Ley (ley@uni-trier.de)
