Paul Lu

2008
38	EE	Paul Lu: The need for diversity in HPC: HPC'08 keynote address. SpringSim 2008: 348
37	EE	Alona Fyshe, Yifeng Liu, Duane Szafron, Russell Greiner, Paul Lu: Improving subcellular localization prediction using text classification and the gene ontology. Bioinformatics 24(21): 2512-2517 (2008)
2007
36	EE	Meng Ding, Paul Lu, Juefu Wang, Mauricio D. Sacchi: Design, Implementation, and Evaluation of Trellis-SDP for File-Level Data Parallelism. ICPP 2007: 31
2006
35		Brett Poulin, Roman Eisner, Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Alona Fyshe, Brandon Pearcy, Cam Macdonell, John Anvik: Visual Explanation of Evidence with Additive Classifiers. AAAI 2006
34	EE	Adrian Driga, Paul Lu, Jonathan Schaeffer, Duane Szafron, Kevin Charter, Ian Parsons: FastLSA: A Fast, Linear-Space, Parallel and Sequential Algorithm for Sequence Alignment. Algorithmica 45(3): 337-375 (2006)
33	EE	Paul Lu, Michael Closson, Cam Macdonell, Paul Nalos, Danny Ngo, Morgan Kan, Mark Lee: The Trellis security infrastructure for overlay metacomputers and bridged distributed file systems. J. Parallel Distrib. Comput. 66(9): 1181-1188 (2006)
32	EE	Luca Pireddu, Duane Szafron, Paul Lu, Russell Greiner: The Path-A metabolic pathway prediction web server. Nucleic Acids Research 34(Web-Server-Issue): 714-719 (2006)
2005
31		Brett Poulin, Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Roman Eisner, Alona Fyshe, Brandon Pearcy, Luca Pireddu: The Proteome Analyst Suite of Automated Function Prediction Tools. AAAI 2005: 1698-1699
30		Luca Pireddu, Brett Poulin, Duane Szafron, Paul Lu, David S. Wishart: Pathway Analyst--Automated Metabolic Pathway Prediction. CIBCB 2005: 243-250
29		Roman Eisner, Brett Poulin, Duane Szafron, Paul Lu, Russell Greiner: Improving Protein Function Prediction Using the Hierarchical Structure of the Gene Ontology. CIBCB 2005: 354-363
28	EE	Jonathan Schaeffer, Yngvi Björnsson, Neil Burch, Akihiro Kishimoto, Martin Müller, Robert Lake, Paul Lu, Steve Sutphen: Solving Checkers. IJCAI 2005: 292-297
27	EE	Yang Wang, Paul Lu: Using Dataflow Information to Improve Inter-Workflow Instance Concurrency. PDCAT 2005: 1078-1082
26	EE	Paul Lu, Duane Szafron, Russell Greiner, David S. Wishart, Alona Fyshe, Brandon Pearcy, Brett Poulin, Roman Eisner, Danny Ngo, Nicholas Lamb: PA-GOSUB: a searchable database of model organism protein sequences with their predicted Gene Ontology molecular function and subcellular localization. Nucleic Acids Research 33(Database-Issue): 147-153 (2005)
25	EE	Gary H. Van Domselaar, Paul Stothard, Savita Shrivastava, Joseph A. Cruz, Anchi Guo, Xiaoli Dong, Paul Lu, Duane Szafron, Russell Greiner, David S. Wishart: BASys: a web server for automated bacterial genome annotation. Nucleic Acids Research 33(Web-Server-Issue): 455-459 (2005)
2004
24		Morgan Kan, Danny Ngo, Mark Lee, Paul Lu, Nolan Bard, Michael Closson, Meng Ding, Mark Goldberg, Nicholas Lamb, Yang Wang, Ron Senda, Edmund Sumbar: The Trellis Security Infrastructure: A Layered Approach to Overlay Metacomputers . HPCS 2004: 109-117
23	EE	Nicholas Lamb, Paul Lu, Alona Fyshe: Trellis Driver: Distributing a Java Workflow across a Network of Workstations. ICPP Workshops 2004: 198-205
22	EE	Meng Ding, Paul Lu: Trellis-SDP: A Simple Data-Parallel Programming Interface. ICPP Workshops 2004: 498-505
21	EE	Zhiyong Lu, Duane Szafron, Russell Greiner, Paul Lu, David S. Wishart, Brett Poulin, John Anvik, Cam Macdonell, Roman Eisner: Predicting subcellular localization of proteins using machine-learned classifiers. Bioinformatics 20(4): (2004)
20		Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Brett Poulin, Roman Eisner, Zhiyong Lu, John Anvik, Cam Macdonell, Alona Fyshe, David Meeuwis: Proteome Analyst: custom predictions with explanations in a web-based tool for high-throughput proteome annotations. Nucleic Acids Research 32(Web-Server-Issue): 365-371 (2004)
2003
19		Jonathan Schaeffer, Yngvi Björnsson, Neil Burch, Robert Lake, Paul Lu, Steve Sutphen: Building the Checkers 10-piece Endgame Databases. ACG 2003: 193-210
18	EE	Adrian Driga, Paul Lu, Jonathan Schaeffer, Duane Szafron, Kevin Charter, Ian Parsons: FastLSA: A Fast, Linear-Space, Parallel and Sequential Algorithm for Sequence Alignment. ICPP 2003: 48-
17	EE	Ernesto Novillo, Paul Lu: A Case Study of Selected SPLASH-2 Applications and the SBT Debugging Tool. IPDPS 2003: 290
16	EE	Mark Goldenberg, Paul Lu, Jonathan Schaeffer: TrellisDAG: A System for Structured DAG Scheduling. JSSPP 2003: 21-43
2002
15		Matthew McNaughton, Paul Lu, Jonathan Schaeffer, Duane Szafron: Memory-Efficient A* Heuristics for Multiple Sequence Alignment. AAAI/IAAI 2002: 737-743
14	EE	Jeff Siegel, Paul Lu: User-Level Remote Data Access in Overlay Metacomputers. CLUSTER 2002: 480-483
13	EE	Christopher Pinchak, Paul Lu, Mark Goldenberg: Practical Heterogeneous Placeholder Scheduling in Overlay Metacomputers: Early Experiences. JSSPP 2002: 205-228
2001
12	EE	Christopher Dutchyn, Paul Lu, Duane Szafron, Steven Bromling, Wade Holst: Multi-Dispatch in the Java Virtual Machine: Design and Implementation. COOTS 2001: 77-92
11	EE	Victor Salamon, Paul Lu, Ben Watson, Dima Brodsky, Dave Gomboc: A Case Study of Improving Memory Locality in Polygonal Model Simplification: Metrics and Performance. HiPC 2001: 137-150
10	EE	Osmar R. Zaïane, Mohammad El-Hajj, Paul Lu: Fast Parallel Association Rule Mining without Candidacy Generation. ICDM 2001: 665-668
9		Ernesto Novillo, Paul Lu: On-Line Debugging and Performance Monitoring with Barriers. IPDPS 2001: 24
8	EE	Paul Lu: Integrating Bulk-Data Transfer into the Aurora Distributed Shared Data System. J. Parallel Distrib. Comput. 61(11): 1609-1632 (2001)
1997
7	EE	Paul Lu: Implementing Optimized Distributed Data Sharing Using Scoped Behavior and a Class Library. COOTS 1997: 145-158
6	EE	Paul Lu: Aurora: Scoped Behavior for Per-Context Optimized Distributed Data Sharing. IPPS 1997: 467-473
1996
5		Jonathan Schaeffer, Robert Lake, Paul Lu, Martin Bryant: CHINOOK: The World Man-Machine Checkers Champion. AI Magazine 17(1): 21-29 (1996)
1993
4		Jonathan Schaeffer, Norman Treloar, Paul Lu, Robert Lake: Man Versus Machine for the World Checkers Championship. AI Magazine 14(2): 28-35 (1993)
3		Xiaobo Li, Paul Lu, Jonathan Schaeffer, John Shillington, Pok Sze Wong, Hanmao Shi: On the Versatility of Parallel Sorting by Regular Sampling. Parallel Computing 19(10): 1079-1103 (1993)
1992
2		Duane Szafron, Jonathan Schaeffer, Pok Sze Wong, Enoch Chan, Paul Lu, Carol Smith: The Enterprise Distributed Programming Model. Programming Environments for Parallel Computing 1992: 67-76
1		Jonathan Schaeffer, Joseph C. Culberson, Norman Treloar, Brent Knight, Paul Lu, Duane Szafron: A World Championship Caliber Checkers Program. Artif. Intell. 53(2-3): 273-289 (1992)

Coauthor Index

1	John Anvik	[20] [21] [35]
2	Nolan Bard	[24]
3	Yngvi Björnsson	[19] [28]
4	Dima Brodsky	[11]
5	Steven Bromling	[12]
6	Martin Bryant	[5]
7	Neil Burch	[19] [28]
8	Enoch Chan	[2]
9	Kevin Charter	[18] [34]
10	Michael Closson	[24] [33]
11	Joseph A. Cruz	[25]
12	Joseph C. Culberson	[1]
13	Meng Ding	[22] [24] [36]
14	Gary H. Van Domselaar	[25]
15	Xiaoli Dong	[25]
16	Adrian Driga	[18] [34]
17	Christopher Dutchyn	[12]
18	Roman Eisner	[20] [21] [26] [29] [31] [35]
19	Mohammad El-Hajj	[10]
20	Alona Fyshe	[20] [23] [26] [31] [35] [37]
21	Mark Goldberg	[24]
22	Mark Goldenberg	[13] [16]
23	Dave Gomboc	[11]
24	Russell Greiner	[20] [21] [25] [26] [29] [31] [32] [35] [37]
25	Anchi Guo	[25]
26	Wade Holst	[12]
27	Morgan Kan	[24] [33]
28	Akihiro Kishimoto	[28]
29	Brent Knight	[1]
30	Robert Lake	[4] [5] [19] [28]
31	Nicholas Lamb	[23] [24] [26]
32	Mark Lee	[24] [33]
33	Xiaobo Li	[3]
34	Yifeng Liu	[37]
35	Zhiyong Lu	[20] [21]
36	Cam Macdonell	[20] [21] [33] [35]
37	Matthew McNaughton	[15]
38	David Meeuwis	[20]
39	Martin Müller	[28]
40	Paul Nalos	[33]
41	Danny Ngo	[24] [26] [33]
42	Ernesto Novillo	[9] [17]
43	Ian Parsons	[18] [34]
44	Brandon Pearcy	[26] [31] [35]
45	Christopher Pinchak	[13]
46	Luca Pireddu	[30] [31] [32]
47	Brett Poulin	[20] [21] [26] [29] [30] [31] [35]
48	Mauricio D. Sacchi	[36]
49	Victor Salamon	[11]
50	Jonathan Schaeffer	[1] [2] [3] [4] [5] [15] [16] [18] [19] [28] [34]
51	Ron Senda	[24]
52	Hanmao Shi	[3]
53	John Shillington	[3]
54	Savita Shrivastava	[25]
55	Jeff Siegel	[14]
56	Carol Smith	[2]
57	Paul Stothard	[25]
58	Edmund Sumbar	[24]
59	Steve Sutphen	[19] [28]
60	Duane Szafron	[1] [2] [12] [15] [18] [20] [21] [25] [26] [29] [30] [31] [32] [34] [35] [37]
61	Norman Treloar	[1] [4]
62	Juefu Wang	[36]
63	Yang Wang	[24] [27]
64	Ben Watson	[11]
65	David S. Wishart	[20] [21] [25] [26] [30] [31] [35]
66	Pok Sze Wong	[2] [3]
67	Osmar R. Zaïane	[10]

Colors in the list of coauthors