5. APBC 2007:
Hong Kong,
China
David Sankoff, Lusheng Wang, Francis Chin (Eds.):
Proceedings of 5th Asia-Pacific Bioinformatics Conference, APBC 2007, 15-17 January 2007, Hong Kong, China.
Advances in Bioinformatics and Computational Biology 5 Imperial College Press 2007, ISBN 978-1-86094-783-4 BibTeX
- David Sankoff, Lusheng Wang, Francis Chin:
Preface.
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- Jennifer A. Marshall Graves:
Exploring Genomes of Distantly Related Mammals.
1
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- Joseph H. Nadeau:
Bugs, Guts and Fat - A Systems Approach to the Metabolic 'Axis of Evil'.
3
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- Pavel A. Pevzner:
Protein Identification via Spectral Networks Analysis.
5
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- Daniel H. Huson, Alexander F. Auch, Qi Ji, Stephan C. Schuster:
etagenome Analysis using Megan.
7-16
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- Qi Fu, Elizabeth Bent, James Borneman, Marek Chrobak, Neal E. Young:
Algorithmic Approaches to Selecting Control Clones in DNA Array Hybridization Experiments.
17-26
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- Matteo Comin, Laxmi Parida:
Subtle Motif Discovery for Detection of DNA Regulatory Sites.
27-36
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- Xudong Xie, Shuanhu Wu, Kin-Man Lam, Hong Yan:
An Effective Promoter Detection Method using the Adaboost Algorithm.
37-46
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- Hongya Zhao, Alan Wee-Chung Liew, Hong Yan:
A New Strategy of Geometrical Biclustering for Microarray Data Analysis.
47-56
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- V. Choi, Y. Huang, Vy Lam, D. Potter, Reinhard C. Laubenbacher, Karen Duca:
Using Formal Concept Analysis for Microarray Data Comparison.
57-66
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- Sara C. Madeira, Arlindo L. Oliveira:
An Efficient Biclustering Algorithm for Finding Genes with Similar Patterns in Time-series Expression Data.
67-80
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- Zhipeng Cai, Randy Goebel, Mohammad R. Salavatipour, Yi Shi, Lizhe Xu, Guohui Lin:
Selecting Genes with Dissimilar Discrimination Strength for Sample Class Prediction.
81-90
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- M. Stissing, Thomas Mailund, Christian N. S. Pedersen, Gerth Stølting Brodal, Rolf Fagerberg:
Computing the All-Pairs Quartet Distance on a Set of Evolutionary Trees.
91-100
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- M. Stissing, Christian N. S. Pedersen, Thomas Mailund, Gerth Stølting Brodal, Rolf Fagerberg:
Computing the Quartet Distance Between Evolutionary Trees of Bounded Degree.
101-110
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- Pinghao Wang, Bing Bing Zhou, Monther Tarawneh, Daniel Chu, Chen Wang, Albert Y. Zomaya, Richard P. Brent:
A Global Maximum Likelihood Super-Quartet Phylogeny Method.
111-120
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- Seung-Jin Sul, Tiffani L. Williams:
A Randomized Algorithm for Comparing Sets of Phylogenetic Trees.
121-130
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- Minghui Jiang, Ying Xu, Binhai Zhu:
Protein Structure-Structure Alignment with Discrete Fr'echet Distance.
131-141
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- Yonggang Lu, Jing He, Charlie E. M. Strauss:
Deriving Protein Structure Topology from the Helix Skeletion in Low Resolution Density Map using Rosetta.
143-151
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- Ján Manuch, Daya Ram Gaur:
Fitting Protein Chains to Cubic Lattice is NP-Complete.
153-164
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- Tatsuya Akutsu, Daiji Fukagawa:
Inferring a Chemical Structure from a Feature Vector Based on Frequency of Labeled Paths and Small Fragments.
165-174
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- Gaofeng Huang, Peter Jeavons, Dominic Kwiatkowski:
Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs.
175-184
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- Young Ju Suh, Wentian Li:
Genotype-Based Case-Control Analysis, Violation of Hardy-Weinberg Equilibrium, and Phase Diagrams.
185-194
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- B. C. Easton, A. V. Isaev, Gavin A. Huttley, Peter Maxwell:
A Probabilistic Method to Identify Compensatory Substitutions for Pathogenic Mutations.
195-204
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- M. Belcaid, Anne Bergeron, Annie Chateau, Cedric Chauve, Yannick Gingras, Guylaine Poisson, M. Vendette:
Exploring Genome Rearrangements using Virtual Hybridization.
205-214
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- Narayanan Raghupathy, Rose Hoberman, Dannie Durand:
Two Plus Two Does not Equal Three: Statistical Tests for Multiple Genome Comparison.
215-225
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- Wei Xu:
The Distance Between Randomly Constructed Genomes.
227-236
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- Zheng Fu, Tao Jiang:
Computing the Breakpoint Distance between Partially Ordered Genomes.
237-246
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- Jochen Supper, Holger Fröhlich, Christian Spieth, Andreas Dräger, Andreas Zell:
Inferring Gene Regulatory Networks by Machine Learning Methods.
247-256
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- Morihiro Hayashida, Tatsuya Akutsu, Hiroshi Nagamochi:
A Novel Clustering Method for Analysis of Biological Networks using Maximal Components of Graphs.
257-266
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- Jochen Supper, Holger Fröhlich, Andreas Zell:
Gene Regulatory Network Inference via Regression Based Topological Refinement.
267-276
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- Falk Hüffner, Sebastian Wernicke, Thomas Zichner:
Algorithm Engineering for Color-Coding to Facilitate Signaling Pathway Detection.
277-286
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- Kang Ning, Ket Fah Chong, Hon Wai Leong:
De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge Strong Tags.
287-296
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- Baozhen Shan, Bin Ma, Kaizhong Zhang, Gilles Lajoie:
Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry.
297-306
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- Shilin Ding, Minlie Huang, Xiaoyan Zhu:
Semi-supervised Pattern Learning for Extracting Relations from Bioscience Texts.
307-316
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- Kinya Okada, Kiyoshi Asai, Masanori Arita:
Flow Model of the Protein-protein Interaction Network for Finding Credible Interactions.
317-326
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- Denise Y. F. Mak, Gary Benson:
All Hits All The Time: Parameter Free Calculation of Seed Sensitivity.
327-340
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- Sung-Hee Park, David Gilbert, Keun Ho Ryu:
Fast Structural Similarity Search Based on Topology String Matching.
341-351
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- Sebastian Wernicke, Florian Rasche:
Simple and Fast Alignment of Metabolic Pathways by Exploiting Local Diversity.
353-362
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- Betty Yee Man Cheng, Jaime G. Carbonell:
Combining N-grams and Alignment in G-protein Coupling Specificity Prediction.
363-372
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Copyright © Sat May 16 22:58:03 2009
by Michael Ley (ley@uni-trier.de)
