2009 |
28 | EE | Aïda Ouangraoua,
Frédéric Boyer,
Andrew McPherson,
Eric Tannier,
Cedric Chauve:
Prediction of Contiguous Regions in the Amniote Ancestral Genome.
ISBRA 2009: 173-185 |
27 | EE | Mathilde Bouvel,
Cedric Chauve,
Marni Mishna,
Dominique Rossin:
Average-case analysis of perfect sorting by reversals
CoRR abs/0901.2847: (2009) |
26 | EE | Cedric Chauve,
Aïda Ouangraoua:
A 3-approximation algorithm for computing a parsimonious first speciation in the gene duplication model
CoRR abs/0904.1645: (2009) |
2008 |
25 | EE | Jean-Philippe Doyon,
Cedric Chauve,
Sylvie Hamel:
Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations.
RECOMB-CG 2008: 1-13 |
24 | EE | Sèverine Bérard,
Annie Chateau,
Cedric Chauve,
Christophe Paul,
Eric Tannier:
Perfect DCJ Rearrangement.
RECOMB-CG 2008: 158-169 |
23 | EE | Sèverine Bérard,
Cedric Chauve,
Christophe Paul:
A more efficient algorithm for perfect sorting by reversals.
Inf. Process. Lett. 106(3): 90-95 (2008) |
22 | EE | Cedric Chauve,
Jean-Philippe Doyon,
Nadia El-Mabrouk:
Gene Family Evolution by Duplication, Speciation, and Loss.
Journal of Computational Biology 15(8): 1043-1062 (2008) |
21 | EE | Anne Bergeron,
Cedric Chauve,
Fabien de Montgolfier,
Mathieu Raffinot:
Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs.
SIAM J. Discrete Math. 22(3): 1022-1039 (2008) |
2007 |
20 | EE | M. Belcaid,
Anne Bergeron,
Annie Chateau,
Cedric Chauve,
Yannick Gingras,
Guylaine Poisson,
M. Vendette:
Exploring Genome Rearrangements using Virtual Hybridization.
APBC 2007: 205-214 |
19 | EE | Cedric Chauve,
Jean-Philippe Doyon,
Nadia El-Mabrouk:
Inferring a Duplication, Speciation and Loss History from a Gene Tree (Extended Abstract).
RECOMB-CG 2007: 45-57 |
18 | EE | Guylaine Poisson,
Cedric Chauve,
Xin Chen,
Anne Bergeron:
FragAnchor: A Large-Scale Predictor of Glycosylphosphatidylinositol Anchors in Eukaryote Protein Sequences by Qualitative Scoring.
Genomics, Proteomics & Bioinformatics 5(2): 121-130 (2007) |
17 | EE | Sèverine Bérard,
Anne Bergeron,
Cedric Chauve,
Christophe Paul:
Perfect Sorting by Reversals Is Not Always Difficult.
IEEE/ACM Trans. Comput. Biology Bioinform. 4(1): 4-16 (2007) |
16 | EE | Guillaume Blin,
Cedric Chauve,
Guillaume Fertin,
Romeo Rizzi,
Stéphane Vialette:
Comparing Genomes with Duplications: A Computational Complexity Point of View.
IEEE/ACM Trans. Comput. Biology Bioinform. 4(4): 523-534 (2007) |
2006 |
15 | EE | Guillaume Blin,
Annie Chateau,
Cedric Chauve,
Yannick Gingras:
Inferring Positional Homologs with Common Intervals of Sequences.
Comparative Genomics 2006: 24-38 |
14 | EE | Cedric Chauve,
Guillaume Fertin,
Romeo Rizzi,
Stéphane Vialette:
Genomes Containing Duplicates Are Hard to Compare.
International Conference on Computational Science (2) 2006: 783-790 |
2005 |
13 | EE | Guillaume Blin,
Cedric Chauve,
Guillaume Fertin:
Genes Order and Phylogenetic Reconstruction: Application to gamma-Proteobacteria.
Comparative Genomics 2005: 11-20 |
12 | EE | Anne Bergeron,
Cedric Chauve,
Fabien de Montgolfier,
Mathieu Raffinot:
Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs.
ESA 2005: 779-790 |
11 | EE | Valentin Guignon,
Cedric Chauve,
Sylvie Hamel:
An Edit Distance Between RNA Stem-Loops.
SPIRE 2005: 335-347 |
10 | EE | Sèverine Bérard,
Anne Bergeron,
Cedric Chauve,
Christophe Paul:
Perfect Sorting by Reversals Is Not Always Difficult.
WABI 2005: 228-238 |
2004 |
9 | EE | Sèverine Bérard,
Anne Bergeron,
Cedric Chauve:
Conservation of Combinatorial Structures in Evolution Scenarios.
Comparative Genomics 2004: 1-14 |
8 | EE | Anne Bergeron,
Mathieu Blanchette,
Annie Chateau,
Cedric Chauve:
Reconstructing Ancestral Gene Orders Using Conserved Intervals.
WABI 2004: 14-25 |
7 | EE | Cedric Chauve,
Guillaume Fertin:
On maximal instances for the original syntenic distance.
Theor. Comput. Sci. 326(1-3): 29-43 (2004) |
2003 |
6 | EE | Cedric Chauve:
Constellations are Lagrangian objects: a bijective proof.
Discrete Mathematics & Theoretical Computer Science 6(1): 13-40 (2003) |
5 | EE | Michel Bousquet,
Cedric Chauve,
Gilbert Labelle,
Pierre Leroux:
Two bijective proofs for the arborescent form of the Good-Lagrange formula and some applications to colored rooted trees and cacti.
Theor. Comput. Sci. 307(2): 277-302 (2003) |
2002 |
4 | EE | Cedric Chauve:
Tree Pattern Matching for Linear Static Terms.
SPIRE 2002: 160-169 |
3 | EE | Cedric Chauve,
Serge Dulucq:
A geometric version of the Robinson-Schensted correspondence for skew oscillating tableaux.
Discrete Mathematics 246(1-3): 67-81 (2002) |
2 | EE | Cedric Chauve:
Tree pattern matching with a more general notion of occurrence of the pattern.
Inf. Process. Lett. 82(4): 197-201 (2002) |
2001 |
1 | EE | Cedric Chauve,
Serge Dulucq,
Andrew Rechnitzer:
Enumerating Alternating Trees.
J. Comb. Theory, Ser. A 94(1): 142-151 (2001) |