| 2008 |
|---|
| 63 | EE | Timothy Danford,
Alex Rolfe,
David K. Gifford:
GSE: A Comprehensive Database System for the Representation, Retrieval, and Analysis of Microarray Data.
Pacific Symposium on Biocomputing 2008: 539-550 |
| 2006 |
|---|
| 62 | EE | Yuan (Alan) Qi,
Patrycja E. Missiuro,
Ashish Kapoor,
Craig P. Hunter,
Tommi Jaakkola,
David K. Gifford,
Hui Ge:
Semi-supervised analysis of gene expression profiles for lineage-specific development in the Caenorhabditis elegans embryo.
ISMB (Supplement of Bioinformatics) 2006: 417-423 |
| 61 | EE | Kenzie D. MacIsaac,
Ting Wang,
D. Benjamin Gordon,
David K. Gifford,
Gary D. Stormo,
Ernest Fraenkel:
An improved map of conserved regulatory sites for Saccharomyces cerevisiae.
BMC Bioinformatics 7: 113 (2006) |
| 60 | EE | Kenzie D. MacIsaac,
D. Benjamin Gordon,
Lena Nekludova,
Duncan T. Odom,
Joerg Schreiber,
David K. Gifford,
Richard A. Young,
Ernest Fraenkel:
A hypothesis-based approach for identifying the binding specificity of regulatory proteins from chromatin immunoprecipitation data.
Bioinformatics 22(4): 423-429 (2006) |
| 2005 |
|---|
| 59 | EE | Rohit Singh,
Nathan Palmer,
David K. Gifford,
Bonnie Berger,
Ziv Bar-Joseph:
Active learning for sampling in time-series experiments with application to gene expression analysis.
ICML 2005: 832-839 |
| 2004 |
|---|
| 58 | EE | Karen Sachs,
Omar D. Perez,
Dana Pe'er,
Garry P. Nolan,
David K. Gifford,
Tommi Jaakkola,
Douglas A. Lauffenburger:
Analysis of Signaling Pathways in Human T-Cells Using Bayesian Network Modeling of Single Cell Data.
CSB 2004: 644 |
| 57 | EE | Ziv Bar-Joseph,
Shlomit Farkash,
David K. Gifford,
Itamar Simon,
Roni Rosenfeld:
Deconvolving cell cycle expression data with complementary information.
ISMB/ECCB (Supplement of Bioinformatics) 2004: 23-30 |
| 56 | EE | Ken T. Takusagawa,
David K. Gifford:
Negative Information for Motif Discovery.
Pacific Symposium on Biocomputing 2004: 360-371 |
| 2003 |
|---|
| 55 | | Ziv Bar-Joseph,
Erik D. Demaine,
David K. Gifford,
Nathan Srebro,
Angèle M. Hamel,
Tommi Jaakkola:
K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data.
Bioinformatics 19(9): 1070-1078 (2003) |
| 54 | EE | Ziv Bar-Joseph,
Georg Gerber,
David K. Gifford,
Tommi Jaakkola,
Itamar Simon:
Continuous Representations of Time-Series Gene Expression Data.
Journal of Computational Biology 10(3/4): 341-356 (2003) |
| 2002 |
|---|
| 53 | EE | Alexander J. Hartemink,
David K. Gifford,
Tommi Jaakkola,
Richard A. Young:
Combining Location and Expression Data for Principled Discovery of Genetic Regulatory Network Models.
Pacific Symposium on Biocomputing 2002: 437-449 |
| 52 | EE | Ziv Bar-Joseph,
Georg Gerber,
David K. Gifford,
Tommi Jaakkola,
Itamar Simon:
A new approach to analyzing gene expression time series data.
RECOMB 2002: 39-48 |
| 51 | EE | Ziv Bar-Joseph,
Erik D. Demaine,
David K. Gifford,
Angèle M. Hamel,
Tommi Jaakkola,
Nathan Srebro:
K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data.
WABI 2002: 506-520 |
| 50 | EE | Alexander J. Hartemink,
David K. Gifford,
Tommi Jaakkola,
Richard A. Young:
Bayesian Methods for Elucidating Genetic Regulatory Networks.
IEEE Intelligent Systems 17(2): 37-43 (2002) |
| 49 | | Julia Khodor,
David K. Gifford:
Experimental Efficiency of Programmed Mutagenesis.
New Generation Comput. 20(3): 307- (2002) |
| 48 | EE | Julia Khodor,
David K. Gifford:
Programmed Mutagenesis Is Universal.
Theory Comput. Syst. 35(5): 483-500 (2002) |
| 2001 |
|---|
| 47 | EE | Julia Khodor,
David K. Gifford:
Programmed Mutagenesis Is a Universal Model of Computation.
DNA 2001: 300-307 |
| 46 | | Ziv Bar-Joseph,
David K. Gifford,
Tommi Jaakkola:
Fast optimal leaf ordering for hierarchical clustering.
ISMB (Supplement of Bioinformatics) 2001: 22-29 |
| 45 | EE | Alexander J. Hartemink,
David K. Gifford,
Tommi Jaakkola,
Richard A. Young:
Using Graphical Models and Genomic Expression Data to Statistically Validate Models of Genetic Regulatory Networks.
Pacific Symposium on Biocomputing 2001: 422-433 |
| 44 | EE | Alex C. Snoeren,
Kenneth Conley,
David K. Gifford:
Mesh Based Content Routing using XML.
SOSP 2001: 160-173 |
| 2000 |
|---|
| 43 | | John Jannotti,
David K. Gifford,
Kirk L. Johnson,
M. Frans Kaashoek,
James O'Toole Jr.:
Overcast: Reliable Multicasting with an Overlay Network.
OSDI 2000: 197-212 |
| 1997 |
|---|
| 42 | EE | Bienvenido Vélez,
Ron Weiss,
Mark A. Sheldon,
David K. Gifford:
Fast and Effective Query Refinement.
SIGIR 1997: 6-15 |
| 1996 |
|---|
| 41 | EE | Ron Weiss,
Bienvenido Vélez,
Mark A. Sheldon,
Chanathip Namprempre,
Peter Szilagyi,
Andrzej Duda,
David K. Gifford:
HyPursuit: A Hierarchical Network Search Engine that Exploits Content-Link Hypertext Clustering.
Hypertext 1996: 180-193 |
| 1995 |
|---|
| 40 | | David K. Gifford,
Lawrence C. Stewart,
Andrew C. Payne,
G. Winfield Treese:
Payment for Open Networks.
COMPCON 1995: 26-31 |
| 39 | | Anthony D. Joseph,
Alan F. deLespinasse,
Joshua A. Tauber,
David K. Gifford,
M. Frans Kaashoek:
Rover: A Toolkit for Mobile Information Access.
SOSP 1995: 156-171 |
| 38 | EE | Mark A. Sheldon,
Andrzej Duda,
David K. Gifford:
Discover: A Resource Discovery System Based on Content Routing.
Computer Networks and ISDN Systems 27(6): 953-972 (1995) |
| 37 | EE | Ron Weiss,
Andrzej Duda,
David K. Gifford:
Composition and Search with a Video Algebra.
IEEE MultiMedia 2(1): 12-25 (1995) |
| 1994 |
|---|
| 36 | EE | Mark A. Sheldon,
Andrzej Duda,
Ron Weiss,
James O'Toole,
David K. Gifford:
Content Routing for Distributed Information Servers.
EDBT 1994: 109-122 |
| 35 | | Ron Weiss,
Andrzej Duda,
David K. Gifford:
Content-Based Access to Algebraic Video.
ICMCS 1994: 140-151 |
| 34 | EE | Brian Reistad,
David K. Gifford:
Static Dependent Costs for Estimating Execution Time.
LISP and Functional Programming 1994: 65-78 |
| 1993 |
|---|
| 33 | | James O'Toole,
Scott Nettles,
David K. Gifford:
Concurrent Compacting Garbage Collection of a Persistent Heap.
SOSP 1993: 161-174 |
| 1992 |
|---|
| 32 | EE | James O'Toole,
David K. Gifford:
Names should mean what, not where.
ACM SIGOPS European Workshop 1992 |
| 31 | | Vincent Dornic,
Pierre Jouvelot,
David K. Gifford:
Polymorphic Time Systems for Estimating Program Complexity.
LOPLAS 1(1): 33-45 (1992) |
| 30 | | David K. Gifford:
Five Forces Shaping Experimental Computer Science.
Operating Systems Review 26(1): 6 (1992) |
| 1991 |
|---|
| 29 | | Vincent Dornic,
Pierre Jouvelot,
David K. Gifford:
Polymorphic Time Systems for Estimating Program Complexity.
JTASPEFT/WSA 1991: 9-17 |
| 28 | | David K. Gifford,
James O'Toole:
Intelligent File Systems for Object Repositories.
Operating Systems of the 90s and Beyond 1991: 20-24 |
| 27 | | Pierre Jouvelot,
David K. Gifford:
Algebraic Reconstruction of Types and Effects.
POPL 1991: 303-310 |
| 26 | | David K. Gifford,
Pierre Jouvelot,
Mark A. Sheldon,
James O'Toole:
Semantic File Systems.
SOSP 1991: 16-25 |
| 1990 |
|---|
| 25 | EE | Mark A. Sheldon,
David K. Gifford:
Static Dependent Types for First Class Modules.
LISP and Functional Programming 1990: 20-29 |
| 24 | EE | James W. Stamos,
David K. Gifford:
Remote Evaluation.
ACM Trans. Program. Lang. Syst. 12(4): 537-565 (1990) |
| 23 | | David K. Gifford:
Polychannel Systems for Mass Digital Communications.
Commun. ACM 33(2): 141-151 (1990) |
| 22 | EE | James W. Stamos,
David K. Gifford:
Implementing Remote Evaluation.
IEEE Trans. Software Eng. 16(7): 710-722 (1990) |
| 1989 |
|---|
| 21 | | James O'Toole,
David K. Gifford:
Type Reconstruction with First-Class Polymorphic Values.
PLDI 1989: 207-217 |
| 20 | | Pierre Jouvelot,
David K. Gifford:
Reasoning about Continuations with Control Effects.
PLDI 1989: 218-226 |
| 1988 |
|---|
| 19 | EE | Pierre Jouvelot,
David K. Gifford:
The FX-87 Interpreter.
ICCL 1988: 65-72 |
| 18 | | John M. Lucassen,
David K. Gifford:
Polymorphic Effect Systems.
POPL 1988: 47-57 |
| 17 | EE | David K. Gifford,
Nathan Glasser:
Remote Pipes and Procedures for Efficient Distributed Communication.
ACM Trans. Comput. Syst. 6(3): 258-283 (1988) |
| 16 | | David K. Gifford,
Roger M. Needham,
Michael D. Schroeder:
The Cedar System.
Commun. ACM 31(3): 288-298 (1988) |
| 1986 |
|---|
| 15 | | David K. Gifford,
John M. Lucassen:
Integrating Functional and Imperative Programming.
LISP and Functional Programming 1986: 28-38 |
| 14 | | Alfred Z. Spector,
David K. Gifford:
A Computer Science Perspective of Bridge Design.
Commun. ACM 29(4): 267-283 (1986) |
| 1985 |
|---|
| 13 | | David K. Gifford,
James E. Donahue:
Coordinating Independent Atomic Actions.
COMPCON 1985: 92-95 |
| 12 | | David K. Gifford,
Robert W. Baldwin,
Stephen T. Berlin,
John M. Lucassen:
An Architecture for Large Scale Information Systems.
SOSP 1985: 161-170 |
| 11 | | Michael D. Schroeder,
David K. Gifford,
Roger M. Needham:
A Caching File System For a Programmer's Workstation.
SOSP 1985: 25-34 |
| 10 | | David K. Gifford,
Alfred Z. Spector:
The Cirrus Banking Network.
Commun. ACM 28(8): 797-807 (1985) |
| 1984 |
|---|
| 9 | EE | David K. Gifford,
Alfred Z. Spector:
The TWA Reservation System.
Commun. ACM 27(7): 649-665 (1984) |
| 8 | | David K. Gifford,
Alfred Z. Spector:
The Space Shuttle Primary Computer System.
Commun. ACM 27(9): 872-900 (1984) |
| 7 | | Alfred Z. Spector,
David K. Gifford:
Case Study: IBM's System/360-370 Architecture.
Commun. ACM 30(4): 291-307 (1984) |
| 1982 |
|---|
| 6 | | David K. Gifford:
Surveyor's Forum: Technical Transactions.
ACM Comput. Surv. 14(2): 316 (1982) |
| 5 | | David K. Gifford:
Cryptographic Sealing for Information Secrecy and Authentication.
Commun. ACM 25(4): 274-286 (1982) |
| 1981 |
|---|
| 4 | | David K. Gifford:
Cryptographic Sealing for Information Secrecy and Authentication (Summary).
SOSP 1981: 123-124 |
| 3 | | David K. Gifford:
Violet, an Experimental Decentralized System.
Computer Networks 5: 423-433 (1981) |
| 1979 |
|---|
| 2 | | David K. Gifford:
Weighted Voting for Replicated Data.
SOSP 1979: 150-162 |
| 1977 |
|---|
| 1 | | David K. Gifford:
Hardware Estimation of Process' Primary Memory Requirements.
Commun. ACM 20(9): 655-663 (1977) |
