CIBCB 2007:
Honolulu,
Hawaii,
USA
Proceedings of the 2007 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2007, Honolulu, Hawaii, USA, April 1-5, 2007, Part of the IEEE Symposium Series on Computational Intelligence (IEEE SSCI 2007).
IEEE 2007 BibTeX
- Alison A. Motsinger, David M. Reif, Theresa J. Fanelli, Anna C. Davis, Marylyn D. Ritchie:
Linkage Disequilibrium in Genetic Association Studies Improves the Performance of Grammatical Evolution Neural Networks.
1-8
Electronic Edition (link) BibTeX
- Filippo Menolascina, Stefania Tommasi, Angelo Paradiso, Marco Cortellino, Vitoantonio Bevilacqua, Giuseppe Mastronardi:
Novel Data Mining Techniques in aCGH based Breast Cancer Subtypes Profiling: the Biological Perspective.
9-16
Electronic Edition (link) BibTeX
- Ji He, Xinbin Dai, Xuechun Zhao:
Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression.
17-24
Electronic Edition (link) BibTeX
- Dan Ashlock, Ling Guo:
Evolutionary Parameter Setting of Multi-clustering.
25-31
Electronic Edition (link) BibTeX
- Hui-Ling Huang, Yi-Hsiung Chen, Dwight D. Koeberl, Shinn-Ying Ho:
Boosting Evolutionary Support Vector Machine for Designing Tumor Classifiers from Microarray Data.
32-38
Electronic Edition (link) BibTeX
- Jahangheer S. Shaik, Mohammed Yeasin:
Two-way Clustering using Fuzzy ASI for Knowledge Discovery in Microarrays.
39-45
Electronic Edition (link) BibTeX
- Jack Y. Yang, Andrzej Niemierko, Mary Qu Yang, Zuojie Luo, Jianling Li:
Predicting Tumor Malignancies using Combined Computational Intelligence, Bioinformatics and Laboratory Molecular Biology Approaches.
46-53
Electronic Edition (link) BibTeX
- Nancy L. Sobczak, George F. Corliss, Martin A. Seitz, Peter J. Tonellato:
Cluster Methodology Defines Archetype Sentinel Consomic Rats.
54-57
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- Lan Chang, Pau-Choo Chung, Chang-Wen Chen:
Combining Neural Network and Wavelet Transformn for Trigger Asynchrony Detection.
58-64
Electronic Edition (link) BibTeX
- Vincent S. Tseng, Chun-Hao Chen, Hsiao-Ming Chen, Hui-Jen Chang, Chin-Tai Yu:
Analysis and Prevention of Dispension Errors by Using Data Mining Techniques.
65-70
Electronic Edition (link) BibTeX
- Bahram Parvin, Nirmalya Ghosh, Laura Heiser, Merrill Knapp, Carolyn L. Talcott, Keith Laderoute, Joe Gray, Paul Spellman:
Spectral Decomposition of Signaling Networks.
76-81
Electronic Edition (link) BibTeX
- Haixin Wang, Lijun Qian, Edward R. Dougherty:
Inference of Gene Regulatory Networks using S-System: A Unified Approach.
82-89
Electronic Edition (link) BibTeX
- Nelli Shimko, Marie-Pierre Dube:
Gene-Gene Interaction Tests Using SVM and Neural Network Modeling.
90-97
Electronic Edition (link) BibTeX
- Christine Smyth, Danny Coomans:
Clustering Microarrays with Predictive Weighted Ensembles.
98-105
Electronic Edition (link) BibTeX
- Vincent S. Tseng, Lien-Chin Chen, Jian-Jie Liu:
Gene Relation Discovery by Mining Similar Subsequences in Time-Series Microarray Data.
106-112
Electronic Edition (link) BibTeX
- Noha A. Yousri, Mohamed A. Ismail, Mohamed S. Kamel:
Discovering Connected Patterns in Gene Expression Arrays.
113-120
Electronic Edition (link) BibTeX
- Chase Krumpelman, Joydeep Ghosh:
Matching and Visualization of Multiple Overlapping Clusterings of Microarray Data.
121-126
Electronic Edition (link) BibTeX
- Evgeny Gladilin, Sandra Götze, Jose Mateos-Langerak, Roel van Driel, Karl Rohr, Roland Eils:
Geometrical probability approach for analysis of 3D chromatin structure in interphase cell nuclei.
127-134
Electronic Edition (link) BibTeX
- Dongsheng Che, Jizhen Zhao, Liming Cai, Ying Xu:
Operon Prediction in Microbial Genomes Using Decision Tree Approach.
135-142
Electronic Edition (link) BibTeX
- Ye-In Chang, Wei-Horng Yeh, Jiun-Rung Chen, Jen-Wei Hu:
An ACGT-Words Tree for Efficient Data Access in Genomic Databases.
143-150
Electronic Edition (link) BibTeX
- Moulik Kothari, Bernard M. E. Moret:
An Experimental Evaluation of Inversion-and Transposition-Based Genomic Distances through Simulations.
151-158
Electronic Edition (link) BibTeX
- Tristan Cazenave:
Overestimation for Multiple Sequence Alignment.
159-164
Electronic Edition (link) BibTeX
- Kuo-Chen Li, Dar-Jen Chang, Eric C. Rouchka, Yuan Yan Chen:
Biological Sequence Mining Using Plausible Neural Network and its Application to Exon/intron Boundaries Prediction.
165-169
Electronic Edition (link) BibTeX
- Patricia Francis-Lyon, Nello Cristianini, Stephen R. Holbrook:
Terminator Detection by Support Vector Machine Utilizing a Stochastic Context-Free Grammar.
170-177
Electronic Edition (link) BibTeX
- Zuojian Tang, Sieu Phan, Youlian Pan, A. Fazel Famili:
Prediction of Co-Regulated Gene Groups through Gene Ontology.
178-184
Electronic Edition (link) BibTeX
- Fatemeh Bakouie, Mohammad Hassan Moradi:
Genetic Regulatory Network Modeling Using Network Component Analysis and Fuzzy Clustering.
185-188
Electronic Edition (link) BibTeX
- Jennifer Hallinan, Anil Wipat:
Motifs and Modules in Fractured Functional Yeast Networks.
189-196
Electronic Edition (link) BibTeX
- Amit U. Sinha, Raj Bhatnagar:
Efficient and Scalable Motif Discovery using Graph-based Search.
197-204
Electronic Edition (link) BibTeX
- Qian Zhong, Riccardo Boscolo, Timothy S. Gardner, Vwani P. Roychowdhury:
Inferring Regulatory Interactions between Transcriptional Factors and Genes by Propagating Known Regulatory Links.
205-211
Electronic Edition (link) BibTeX
- Bogdan Done, Purvesh Khatri, Arina Done, Sorin Draghici:
Semantic Analysis of Genome Annotations using Weighting Schemes.
212-218
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- Pooja, Jagath C. Rajapakse:
Comparison of Human and Mouse Pseudogenes.
219-224
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- Young-Rae Cho, Woochang Hwang, Aidong Zhang:
Modularization of Protein Interaction Networks by Incorporating Gene Ontology Annotations.
233-238
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- Herbert H. Tsang, Kay C. Wiese:
SARNA-Predict: A Study of RNA Secondary Structure Prediction Using Different Annealing Schedules.
239-246
Electronic Edition (link) BibTeX
- Swati Pande, Amar Raheja, Dennis R. Livesay:
Prediction of Enzyme Catalytic Sites from Sequence Using Neural Networks.
247-253
Electronic Edition (link) BibTeX
- Menaka Rajapakse, Lin Feng:
Predicting Peptide Binders of Flexible Lengths with Genetic Annealing Algorithm.
262-267
Electronic Edition (link) BibTeX
- Scott F. Smith:
RNA Gene Finding with Biased Mutation Operators.
268-274
Electronic Edition (link) BibTeX
- Chengpeng Bi:
A Genetic-Based EM Motif-Finding Algorithm for Biological Sequence Analysis.
275-282
Electronic Edition (link) BibTeX
- Raul Cruz-Cano, Deepak Chandran, Ming-Ying Leung:
Computational Prediction of Replication Origins in Herpesviruses.
283-290
Electronic Edition (link) BibTeX
- Pawel Kupis, Jacek Mandziuk:
Evolutionary-Progressive Method for Multiple Sequence Alignment.
291-297
Electronic Edition (link) BibTeX
- Mihail Popescu, Dong Xu, Erik Taylor:
GoFuzzKegg: Mapping Genes to KEGG Pathways Using an Ontological Fuzzy Rule System.
298-303
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- Sara Nasser, Gregory Vert, Monica N. Nicolescu, Alison Murray:
Multiple Sequence Alignment using Fuzzy Logic.
304-311
Electronic Edition (link) BibTeX
- Gerald Schaefer, Tomoharu Nakashima, Yasuyuki Yokota, Hisao Ishibuchi:
Cost-Sensitive Fuzzy Classification for Medical Diagnosis.
312-316
Electronic Edition (link) BibTeX
- Bernard Chen, Stephen Pellicer, Phang C. Tai, Robert W. Harrison, Yi Pan:
Super Granular SVM Feature Elimination (Super GSVM-FE) Model for Protein Sequence Motif Informnation Extraction.
317-322
Electronic Edition (link) BibTeX
- Qinru Qiu, Daniel Burns, Qing Wu, Prakash Mukre:
Hybrid Architecture for Accelerating DNA Codeword Library Searching.
323-330
Electronic Edition (link) BibTeX
- Miguel Rocha, José P. Pinto, Isabel Rocha, Eugénio C. Ferreira:
Optimization of Bacterial Strains with Variable-Sized Evolutionary Algorithms.
331-337
Electronic Edition (link) BibTeX
- Dan Ashlock, Fatemeh Jafargholi:
Evolving Extremal Epidemic Networks.
338-345
Electronic Edition (link) BibTeX
- Heike Sichtig:
Building Smart Machines by Utilizing Spiking Neural Networks; Current Perspectives.
346-350
Electronic Edition (link) BibTeX
- Waldo Cancino Ticona, Alexandre C. B. Delbem:
Multi-Criterion Phylogenetic Inference using Evolutionary Algorithms.
351-358
Electronic Edition (link) BibTeX
- Luiz C. S. Rozante, Marco Dimas Gubitoso, Sergio R. Matioli:
A Framework for Discrete Modeling of Juxtacrine Signaling Systems.
359-366
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- Stefan Maetschke, Marcus Gallagher, Mikael Bodén:
A Comparison of Sequence Kernels for Localization Prediction of Transmembrane Proteins.
367-372
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- George Papadopoulos, Martin Brown:
Feature Sensitivity on Biochemical Signaling Pathways.
373-380
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- Jing Yang, Visakan Kadirkamanathan, Stephen A. Billings:
In vivo Intracellular Metabolite Dynamics Estimation by Sequential Monte Carlo Filter.
387-394
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- Jayavardhana Gubbi, Alistair Shilton, Marimuthu Palaniswami, Michael Parker:
Real Value Solvent Accessibility Prediction using Adaptive Support Vector Regression.
395-401
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- Shotaro Akaho, Kenji Fukumizu:
Active Learning for Network Estimation.
402-409
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- Sarawan Wongsa, Visakan Kadirkamanathan, Stephen A. Billings, Phillip C. Wright:
Metabolic Flux Estimation from Incomplete Labelling Measurements Using the Expectation/Conditional-Maximisation Algorithm.
410-417
Electronic Edition (link) BibTeX
- Hae-Jin Hu, Hao Wang, Robert Harrison, Phang C. Tai, Yi Pan:
Understanding the Prediction of Transmembrane Proteins by Support Vector Machine using Association Rule Mining.
418-425
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- Karsten Kube, Andreas Herzog, Bernd Michaelis, Ana D. de Lima, Thomas B. Voigt:
Synchronization in Complex Dynamical Networks.
426-431
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- Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. Das:
Modeling protein-DNA binding time in Stochastic Discrete Event Simulation of Biological Processes.
439-446
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- Jie Zhou, Sundeep Yedida:
Channel Selection in EEG-based Prediction of Shoulder/Elbow Movement Intentions involving Stroke Patients: A Computational Approach.
455-460
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- Pedro Gabriel Ferreira, Cândida G. Silva, Rui M. M. Brito, Paulo J. Azevedo:
A Closer Look on Protein Unfolding Simulations through Hierarchical Clustering.
461-468
Electronic Edition (link) BibTeX
- James C. Costello, Jade E. Buchanan-Carter, Mehmet M. Dalkilic, Justen Andrews:
Using Drosophila melanogaster Data to Discover Disease-Related Protein Interactions in Humans.
469-475
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- Yalan Ye, Jing Wan, Zhi-Lin Zhang, Chen Jia, Wu Lei:
A Flexible Fully-Multiplicative Orthogonal-Group Based ICA Algorithm.
476-479
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- Jen-Suh Chern, Saiwei Yang, Chi-Wen Long, Chen-Yu Lo:
The Difference of Bilateral Limbs Involvement During Trunk Bending and Reaching in Stroke Patients.
480-487
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- Yuchou Chang, Dah-Jye Lee, Yonggang Wang:
Color-Texture Segmentation of Medical Images Based on Local Contrast Information.
488-493
Electronic Edition (link) BibTeX
- Matthias Dose, Christian Gruber, Ariane Grunz, Christian Hook, Juergen Kempf, Georg Scharfenberg, Bernhard Sick:
Towards an Automated Analysis of Neuroleptics' Impact on Human Hand Motor Skills.
494-501
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- Amin Assareh, Mohammad Hassan Moradi:
Extracting Efficient Fuzzy If-Then Rules from Mass Spectra of Blood Samples to Early Diagnosis of Ovarian Cancer.
502-506
Electronic Edition (link) BibTeX
Copyright © Sat May 16 23:01:30 2009
by Michael Ley (ley@uni-trier.de)
