Roland Eils

2008
50	EE	William J. Godinez, Marko Lampe, Stefan Wörz, Barbara Müller, Roland Eils, Karl Rohr: Probabilistic Tracking of Virus Particles in Fluorescence Microscopy Image Sequences. Bildverarbeitung für die Medizin 2008: 448-452
49	EE	Petr Matula, Anil Kumar, Ilka Wörz, Nathalie Harder, Holger Erfle, Ralf Bartenschlager, Roland Eils, Karl Rohr: Automated Analysis of siRNA Screens of Virus Infected Cells Based on Immunofluorescence Microscopy. Bildverarbeitung für die Medizin 2008: 453-457
48	EE	William J. Godinez, Marko Lampe, Stefan Wörz, Barbara Müller, Roland Eils, Karl Rohr: Probabilistic tracking of virus particles in fluorescence microscopy images. ISBI 2008: 272-275
47	EE	Jan T. Kim, Roland Eils: Systems Biology and Artificial Life: Towards Predictive Modeling of Biological Systems. Artificial Life 14(1): 1-2 (2008)
46	EE	Siwei Yang, Daniela Köhler, Kathrin Teller, Thomas Cremer, Patricia Le Baccon, Edith Heard, Roland Eils, Karl Rohr: Nonrigid Registration of 3-D Multichannel Microscopy Images of Cell Nuclei. IEEE Transactions on Image Processing 17(4): 493-499 (2008)
2007
45	EE	Evgeny Gladilin, Sandra Götze, Jose Mateos-Langerak, Roel van Driel, Karl Rohr, Roland Eils: Stochastical Analysis of Finite Point Sampling of 3D Chromatin Fiber in Interphase Cell Nuclei. BIRD 2007: 104-118
44	EE	Evgeny Gladilin, Karl Rohr, Roland Eils: On Validation of Non-physical Techniques for Elastic Image Registration. Bildverarbeitung für die Medizin 2007: 111-115
43	EE	Il-Han Kim, Siwei Yang, Patricia Le Baccon, Edith Heard, Constantin Kappel, Roland Eils, Karl Rohr: Non-rigid Temporal Alignment of 2D and 3D Multi-channel Microscopy Image Sequences of Human Cells. Bildverarbeitung für die Medizin 2007: 16-20
42	EE	Nathalie Harder, Felipe Mora-Bermúdez, William J. Godinez, Jan Ellenberg, Roland Eils, Karl Rohr: Determination of Mitotic Delays in 3D Fluorescence Microscopy Images of Human Cells Using an Error-Correcting Finite State Machine. Bildverarbeitung für die Medizin 2007: 242-246
41	EE	William J. Godinez, Marko Lampe, Stefan Wörz, Barbara Müller, Roland Eils, Karl Rohr: Tracking of Virus Particles in Time-Lapse Fluorescence Microscopy Image Sequences. Bildverarbeitung für die Medizin 2007: 6-10
40	EE	Evgeny Gladilin, Sandra Götze, Jose Mateos-Langerak, Roel van Driel, Karl Rohr, Roland Eils: Geometrical probability approach for analysis of 3D chromatin structure in interphase cell nuclei. CIBCB 2007: 127-134
39	EE	Siwei Yang, Sandra Götze, Julio Mateos-Langerak, Roel van Driel, Roland Eils, Karl Rohr: Analyzing the Variability of the 3D Structure of Chromatin Fiber Using Statistical Shape Theory. DAGM-Symposium 2007: 497-506
38	EE	Nathalie Harder, Felipe Mora-Bermúdez, William J. Godinez, Jan Ellenberg, Roland Eils, Karl Rohr: Determination of Mitotic Delays in 3d Fluorescence Microscopy Images of Human Cells Using an Error-Correcting Finite State Machine. ISBI 2007: 1044-1047
37	EE	Il-Han Kim, Siwei Yang, Patricia Le Baccon, Edith Heard, Yi-Chun Chen, David Spector, Constantin Kappel, Roland Eils, Karl Rohr: Non-Rigid Temporal Registration of 2d and 3d Multi-Channel Microscopy Image Sequences of Human Cells. ISBI 2007: 1328-1331
36	EE	William J. Godinez, Marko Lampe, Stefan Wörz, Barbara Müller, Roland Eils, Karl Rohr: Tracking of Virus Particles in Time-Lapse Fluorescence Microscopy Image Sequences. ISBI 2007: 256-259
35		Kitiporn Plaimas, Marcus Oswald, Roland Eils, Rainer König: Integrating Genomic and Transcriptomic Data into Graph Based Approaches for Defining Essential Reactions in the Metabolic Network of Escherichia Coli. LWA 2007: 55-60
34	EE	Siwei Yang, Sandra Götze, Julio Mateos-Langerak, Roel van Driel, Roland Eils, Karl Rohr: Variability Analysis of the Large-Scale Structure of Interphase Chromatin Fiber Based on Statistical Shape Theory. MDA 2007: 37-46
2006
33	EE	Siwei Yang, Daniela Köhler, Kathrin Teller, Thomas Cremer, Roland Eils, Karl Rohr: Non-rigid Registration of 3D Microscopy Images for the Normalization of Different Cell Nuclei. Bildverarbeitung für die Medizin 2006: 364-368
32	EE	Nathalie Harder, Beate Neumann, Michael Held, Urban Liebel, Holger Erfle, Jan Ellenberg, Roland Eils, Karl Rohr: Automated Analysis of Mitotic Phenotypes in Fluorescence Microscopy Images of Human Cells. Bildverarbeitung für die Medizin 2006: 374-378
31	EE	Evgeny Gladilin, Roland Eils, Karl Rohr: 3D Formnormalisierung von Zellkernen mit Hilfe einer elastischen Kugelabbildung. Bildverarbeitung für die Medizin 2006: 384-388
30	EE	Vassili Kovalev, Nathalie Harder, Beate Neumann, Michael Held, Urban Liebel, Holger Erfle, Jan Ellenberg, Roland Eils, Karl Rohr: Feature Selection for Evaluating Fluorescence Microscopy Images in Genome-Wide Cell Screens. CVPR (1) 2006: 276-283
29	EE	Nathalie Harder, Beate Neumann, Michael Held, Urban Liebel, Holger Erfle, Jan Ellenberg, Roland Eils, Karl Rohr: Automated recognition of mitotic patterns in fluorescence microscopy images of human cells. ISBI 2006: 1016-1019
28	EE	Julian Mattes, Janna Nawroth, Petra Boukamp, Roland Eils, Karin M. Greulich-Bode: Analyzing motion and deformation of the cell nucleus for studying co-localizations of nuclear structures. ISBI 2006: 1044-1047
27	EE	Gunnar Schramm, Marcus Oswald, Hanna Seitz, Sebastian Sager, Marc Zapatka, Gerhard Reinelt, Roland Eils, Rainer König: Pattern recognition of gene expression data on biochemical networks with simple wavelet transforms. LWA 2006: 350-355
26	EE	Nathalie Harder, Felipe Mora-Bermúdez, William J. Godinez, Jan Ellenberg, Roland Eils, Karl Rohr: Automated Analysis of the Mitotic Phases of Human Cells in 3D Fluorescence Microscopy Image Sequences. MICCAI (1) 2006: 840-848
25	EE	Siwei Yang, Daniela Köhler, Kathrin Teller, Thomas Cremer, Patricia Le Baccon, Edith Heard, Roland Eils, Karl Rohr: Non-rigid Registration of 3D Multi-channel Microscopy Images of Cell Nuclei. MICCAI (1) 2006: 907-914
24	EE	Rainer König, Gunnar Schramm, Marcus Oswald, Hanna Seitz, Sebastian Sager, Marc Zapatka, Gerhard Reinelt, Roland Eils: Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms. BMC Bioinformatics 7: 119 (2006)
23	EE	Arunachalam Vinayagam, Coral del Val, Falk Schubert, Roland Eils, Karl-Heinz Glatting, Sándor Suhai, Rainer König: GOPET: A tool for automated predictions of Gene Ontology terms. BMC Bioinformatics 7: 161 (2006)
22	EE	Theodora Manoli, Norbert Gretz, Hermann-Josef Gröne, Marc Kenzelmann, Roland Eils, Benedikt Brors: Group testing for pathway analysis improves comparability of different microarray datasets. Bioinformatics 22(20): 2500-2506 (2006)
21	EE	Markus Ulrich, Constantin Kappel, Joël Beaudouin, Stefan Hezel, Jochen Ulrich, Roland Eils: Tropical - parameter estimation and simulation of reaction-diffusion models based on spatio-temporal microscopy images. Bioinformatics 22(21): 2709-2710 (2006)
20	EE	Priyanka Shahi, Serguei Loukianiouk, Andreas Bohne-Lang, Marc Kenzelmann, Stefan Küffer, Sabine Maertens, Roland Eils, Hermann-Josef Gröne, Norbert Gretz, Benedikt Brors: Argonaute - a database for gene regulation by mammalian microRNAs. Nucleic Acids Research 34(Database-Issue): 115-118 (2006)
19	EE	Roland Eils, Leo Neumann: Systems Biology and Information Technology (Systembiologie und Informationstechnologie. it - Information Technology 48(3): 131-132 (2006)
18	EE	Ivayla Vacheva, Roland Eils: Computational Systems Biology Platforms (Computergestützte Systembiologieplattformen). it - Information Technology 48(3): 140-147 (2006)
2005
17	EE	Falk Schubert, Bernhard Tausch, Stefan Joos, Roland Eils: CGH-Profiler: Data mining based on genomic aberration profiles. BMC Bioinformatics 6: 188 (2005)
16	EE	Patrick Warnat, Roland Eils, Benedikt Brors: Cross-platform analysis of cancer microarray data improves gene expression based classification of phenotypes. BMC Bioinformatics 6: 265 (2005)
15	EE	Svetlana Bulashevska, Roland Eils: Inferring genetic regulatory logic from expression data. Bioinformatics 21(11): 2706-2713 (2005)
2004
14	EE	Dietmar Volz, Martin Eigel, Chaitanya Athale, Peter Bastian, Harald Hermann, Constantin Kappel, Roland Eils: Spatial Modeling and Simulation of Diffusion in Nuclei of Living Cells. CMSB 2004: 161-171
13	EE	Martin Bentele, Roland Eils: General Stochastic Hybrid Method for the Simulation of Chemical Reaction Processes in Cells. CMSB 2004: 248-251
12		Juntao Gao, Roland Eils, Daniela Köhler, Irina Solovei, Thomas Cremer, Julian Mattes: Assessing The Similarity of Spatial Configurations Using Distance Differences and Bending Energy: Application To Chromosomal Interphase Arrangements In HeLa Cell Clones. ISBI 2004: 1400-1403
11	EE	Arunachalam Vinayagam, Rainer König, Jutta Moormann, Falk Schubert, Roland Eils, Karl-Heinz Glatting, Sándor Suhai: Applying Support Vector Machines for Gene ontology based gene function prediction. BMC Bioinformatics 5: 116 (2004)
10	EE	Rainer König, Roland Eils: Gene expression analysis on biochemical networks using the Potts spin model. Bioinformatics 20(10): 1500-1505 (2004)
2003
9		Falk Schubert, Jasmin Müller, Björn Fritz, Peter Lichter, Roland Eils: Understanding the classification of tumors with a support-vector-machine: A case-based explanation scheme. German Conference on Bioinformatics 2003: 123-127
8		Rainer König, Roland Eils: Gene expression analysis on biochemical networks with the potts spin model. German Conference on Bioinformatics 2003: 69-72
2002
7		Marco Weismueller, Rainer König, Roland Eils: Modelling of Information Flows in Cells. ESM 2002: 413-417
6		Roland Eils: Machine Learning Approaches for Deciphering Complex Pathomechanisms in Cancer. GI Jahrestagung (Ergänzungsband) 2002: 63-64
2001
5	EE	Johannes Fieres, Julian Mattes, Roland Eils: A Point Set Registration Algorithm Using a Motion Model Based on Thin-Plate Splines and Point Clustering. DAGM-Symposium 2001: 76-83
4	EE	Julian Mattes, Johannes Fieres, Joël Beaudouin, Daniel Gerlich, Jan Ellenberg, Roland Eils: New Tools for Visualization and Quantification in Dynamic Processes: Application to the Nuclear Envelope Dynamics During Mitosis. MICCAI 2001: 1323-1325
3	EE	Matthias Gebhard, Julian Mattes, Roland Eils: An Active Contour Model for Segmentation Based on Cubic B-splines and Gradient Vector Flow. MICCAI 2001: 1373-1375
1996
2		Harald Bornfleth, Daniele Zink, Kurt Sätzler, Roland Eils, Christoph Cremer: Modellgestützte Segmentierung von Replikationsdomänen in dreidimensionalen konfokalen Mikroskopiebildern. DAGM-Symposium 1996: 408-419
1		Kurt Sätzler, Cornelius Cremer, Roland Eils: 3D-Bildfolgen zur Auflösungsverbesserung in der Fluoreszenzmikroskopie. DAGM-Symposium 1996: 92-105

Coauthor Index

1	Chaitanya Athale	[14]
2	Patricia Le Baccon	[25] [37] [43] [46]
3	Ralf Bartenschlager	[49]
4	Peter Bastian	[14]
5	Joël Beaudouin	[4] [21]
6	Martin Bentele	[13]
7	Andreas Bohne-Lang	[20]
8	Harald Bornfleth	[2]
9	Petra Boukamp	[28]
10	Benedikt Brors	[16] [20] [22]
11	Svetlana Bulashevska	[15]
12	Yi-Chun Chen	[37]
13	Christoph Cremer	[2]
14	Cornelius Cremer	[1]
15	Thomas Cremer	[12] [25] [33] [46]
16	Roel van Driel	[34] [39] [40] [45]
17	Martin Eigel	[14]
18	Jan Ellenberg	[4] [26] [29] [30] [32] [38] [42]
19	Holger Erfle	[29] [30] [32] [49]
20	Johannes Fieres	[4] [5]
21	Björn Fritz	[9]
22	Juntao Gao	[12]
23	Matthias Gebhard	[3]
24	Daniel Gerlich	[4]
25	Evgeny Gladilin	[31] [40] [44] [45]
26	Karl-Heinz Glatting	[11] [23]
27	William J. Godinez	[26] [36] [38] [41] [42] [48] [50]
28	Sandra Götze	[34] [39] [40] [45]
29	Norbert Gretz	[20] [22]
30	Karin M. Greulich-Bode	[28]
31	Hermann-Josef Gröne	[20] [22]
32	Nathalie Harder	[26] [29] [30] [32] [38] [42] [49]
33	Edith Heard	[25] [37] [43] [46]
34	Michael Held	[29] [30] [32]
35	Harald Hermann	[14]
36	Stefan Hezel	[21]
37	Stefan Joos	[17]
38	Constantin Kappel	[14] [21] [37] [43]
39	Marc Kenzelmann	[20] [22]
40	Il-Han Kim	[37] [43]
41	Jan T. Kim	[47]
42	Daniela Köhler	[12] [25] [33] [46]
43	Rainer König	[7] [8] [10] [11] [23] [24] [27] [35]
44	Vassili Kovalev	[30]
45	Stefan Küffer	[20]
46	Anil Kumar	[49]
47	Marko Lampe	[36] [41] [48] [50]
48	Peter Lichter	[9]
49	Urban Liebel	[29] [30] [32]
50	Serguei Loukianiouk	[20]
51	Sabine Maertens	[20]
52	Theodora Manoli	[22]
53	Jose Mateos-Langerak	[40] [45]
54	Julio Mateos-Langerak	[34] [39]
55	Julian Mattes	[3] [4] [5] [12] [28]
56	Petr Matula	[49]
57	Jutta Moormann	[11]
58	Felipe Mora-Bermúdez	[26] [38] [42]
59	Barbara Müller	[36] [41] [48] [50]
60	Jasmin Müller	[9]
61	Janna Nawroth	[28]
62	Beate Neumann	[29] [30] [32]
63	Leo Neumann	[19]
64	Marcus Oswald	[24] [27] [35]
65	Kitiporn Plaimas	[35]
66	Gerhard Reinelt	[24] [27]
67	Karl Rohr	[25] [26] [29] [30] [31] [32] [33] [34] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [48] [49] [50]
68	Sebastian Sager	[24] [27]
69	Kurt Sätzler	[1] [2]
70	Gunnar Schramm	[24] [27]
71	Falk Schubert	[9] [11] [17] [23]
72	Hanna Seitz	[24] [27]
73	Priyanka Shahi	[20]
74	Irina Solovei	[12]
75	David Spector	[37]
76	Sándor Suhai	[11] [23]
77	Bernhard Tausch	[17]
78	Kathrin Teller	[25] [33] [46]
79	Jochen Ulrich	[21]
80	Markus Ulrich	[21]
81	Ivayla Vacheva	[18]
82	Coral del Val	[23]
83	Arunachalam Vinayagam	[11] [23]
84	Dietmar Volz	[14]
85	Patrick Warnat	[16]
86	Marco Weismueller	[7]
87	Ilka Wörz	[49]
88	Stefan Wörz	[36] [41] [48] [50]
89	Siwei Yang	[25] [33] [34] [37] [39] [43] [46]
90	Marc Zapatka	[24] [27]
91	Daniele Zink	[2]

Colors in the list of coauthors