2008 |
12 | EE | Peicheng Du,
Gustavo Stolovitzky,
Peter Horvatovich,
Rainer Bischoff,
Jihyeon Lim,
Frank Suits:
A noise model for mass spectrometry based proteomics.
Bioinformatics 24(8): 1070-1077 (2008) |
2006 |
11 | EE | Blake G. Fitch,
Aleksandr Rayshubskiy,
Maria Eleftheriou,
T. J. Christopher Ward,
Mark Giampapa,
Yuriy Zhestkov,
Michael Pitman,
Frank Suits,
Alan Grossfield,
Jed W. Pitera,
William C. Swope,
Ruhong Zhou,
Scott Feller,
Robert S. Germain:
Blue Matter: Strong Scaling of Molecular Dynamics on Blue Gene/L.
International Conference on Computational Science (2) 2006: 846-854 |
10 | EE | Ruhong Zhou,
Ajay K. Royyuru,
Prasanna Athma,
Frank Suits,
B. David Silverman:
Magnitude and spatial orientation of the hydrophobic moments of multi-domain proteins.
IJBRA 2(2): 161-176 (2006) |
2005 |
9 | EE | Robert S. Germain,
Blake G. Fitch,
Aleksandr Rayshubskiy,
Maria Eleftheriou,
Michael Pitman,
Frank Suits,
Mark Giampapa,
T. J. Christopher Ward:
Blue matter on blue gene/L: massively parallel computation for biomolecular simulation.
CODES+ISSS 2005: 207-212 |
8 | EE | George S. Almasi,
Gyan Bhanot,
Dong Chen,
Maria Eleftheriou,
Blake G. Fitch,
Alan Gara,
Robert S. Germain,
John A. Gunnels,
Manish Gupta,
Philip Heidelberger,
Michael Pitman,
Aleksandr Rayshubskiy,
James C. Sexton,
Frank Suits,
Pavlos Vranas,
Robert Walkup,
T. J. Christopher Ward,
Yuriy Zhestkov,
Alessandro Curioni,
Wanda Andreoni,
Charles Archer,
José E. Moreira,
Richard Loft,
Henry M. Tufo,
Theron Voran,
Katherine Riley:
Early Experience with Scientific Applications on the Blue Gene/L Supercomputer.
Euro-Par 2005: 560-570 |
7 | EE | Robert S. Germain,
Yuriy Zhestkov,
Maria Eleftheriou,
Aleksandr Rayshubskiy,
Frank Suits,
T. J. Christopher Ward,
Blake G. Fitch:
Early performance data on the Blue Matter molecular simulation framework.
IBM Journal of Research and Development 49(2-3): 447-456 (2005) |
6 | EE | Robert F. Enenkel,
Blake G. Fitch,
Robert S. Germain,
Fred G. Gustavson,
A. Martin,
Mark P. Mendell,
Jed W. Pitera,
Michael Pitman,
Aleksandr Rayshubskiy,
Frank Suits,
William C. Swope,
T. J. Christopher Ward:
Custom math functions for molecular dynamics.
IBM Journal of Research and Development 49(2-3): 465-474 (2005) |
5 | EE | Frank Suits,
Michael Pitman,
Jed W. Pitera,
William C. Swope,
Robert S. Germain:
Overview of molecular dynamics techniques and early scientific results from the Blue Gene project.
IBM Journal of Research and Development 49(2-3): 475-488 (2005) |
2003 |
4 | EE | Blake G. Fitch,
Robert S. Germain,
Mark P. Mendell,
Jed W. Pitera,
Michael Pitman,
Aleksandr Rayshubskiy,
Yuk Yin Sham,
Frank Suits,
William C. Swope,
T. J. Christopher Ward,
Yuriy Zhestkov,
Ruhong Zhou:
Blue Matter, an application framework for molecular simulation on Blue Gene.
J. Parallel Distrib. Comput. 63(7-8): 759-773 (2003) |
2001 |
3 | EE | Donna L. Gresh,
Frank Suits,
Yuk Yin Sham:
Case Study: An Environment for Understanding Protein Simulations Using Game Graphics.
IEEE Visualization 2001 |
2 | EE | Frances E. Allen,
George S. Almasi,
Wanda Andreoni,
Daniel K. Beece,
Bruce J. Berne,
Arthur A. Bright,
José R. Brunheroto,
Calin Cascaval,
José G. Castaños,
Paul Coteus,
Paul Crumley,
Alessandro Curioni,
Monty Denneau,
Wilm E. Donath,
Maria Eleftheriou,
Blake G. Fitch,
Bruce M. Fleischer,
Christos J. Georgiou,
Robert S. Germain,
Mark Giampapa,
Donna L. Gresh,
Manish Gupta,
Ruud A. Haring,
C. T. Howard Ho,
Peter H. Hochschild,
Susan Flynn Hummel,
Tiziana Jonas,
Derek Lieber,
Glenn J. Martyna,
Kiran K. Maturu,
José E. Moreira,
Dennis M. Newns,
Matthew Newton,
Robert Philhower,
Thomas Picunko,
Jed W. Pitera,
Michael Pitman,
Rick A. Rand,
Ajay K. Royyuru,
Valentina Salapura,
Alda Sanomiya,
Rahul S. Shah,
Yuk Yin Sham,
Sarabjeet Singh,
Marc Snir,
Frank Suits,
Richard A. Swetz,
William C. Swope,
Nagesh K. Vishnumurthy,
T. J. Christopher Ward,
Henry S. Warren Jr.,
Ruhong Zhou:
Blue Gene: A vision for protein science using a petaflop supercomputer.
IBM Systems Journal 40(2): 310-327 (2001) |
2000 |
1 | EE | Frank Suits,
James T. Klosowski,
William Horn,
Gérard Lecina:
Simplification of surface annotations.
IEEE Visualization 2000: 235-242 |