John A. Gunnels

2009
34	EE	Michael Kistler, John A. Gunnels, Daniel A. Brokenshire, Brad Benton: Petascale computing with accelerators. PPOPP 2009: 241-250
2008
33	EE	Vaibhav Saxena, Prashant Agrawal, Yogish Sabharwal, Vijay K. Garg, Vimitha A. Kuruvilla, John A. Gunnels: Optimization of BLAS on the Cell Processor. HiPC 2008: 18-29
32	EE	Yogish Sabharwal, Saurabh K. Garg, Rahul Garg, John A. Gunnels, Ramendra K. Sahoo: Optimization of Fast Fourier Transforms on the Blue Gene/L Supercomputer. HiPC 2008: 309-322
31	EE	Eric J. Bohm, Abhinav Bhatele, Laxmikant V. Kalé, Mark E. Tuckerman, Sameer Kumar, John A. Gunnels, Glenn J. Martyna: Fine-grained parallelization of the Car - Parrinello ab initio molecular dynamics method on the IBM Blue Gene/L supercomputer. IBM Journal of Research and Development 52(1-2): 159-176 (2008)
2007
30	EE	James N. Glosli, D. F. Richards, K. J. Caspersen, R. E. Rudd, John A. Gunnels, Frederick H. Streitz: Extending stability beyond CPU millennium: a micron-scale atomistic simulation of Kelvin-Helmholtz instability. SC 2007: 58
29	EE	Kamen Yotov, Thomas Roeder, Keshav Pingali, John A. Gunnels, Fred G. Gustavson: An experimental comparison of cache-oblivious and cache-conscious programs. SPAA 2007: 93-104
2006
28	EE	Fred G. Gustavson, John A. Gunnels, James C. Sexton: Minimal Data Copy for Dense Linear Algebra Factorization. PARA 2006: 540-549
27	EE	John A. Gunnels, Fred G. Gustavson, Keshav Pingali, Kamen Yotov: Is Cache-Oblivious DGEMM Viable? PARA 2006: 919-928
26	EE	François Gygi, Erik W. Draeger, Martin Schulz, Bronis R. de Supinski, John A. Gunnels, Vernon Austel, James C. Sexton, Franz Franchetti, Stefan Kral, Christoph W. Ueberhuber, Juergen Lorenz: Gordon Bell finalists I - Large-scale electronic structure calculations of high-Z metals on the BlueGene/L platform. SC 2006: 45
25	EE	Hiroshi Akiba, Tomonobu Ohyama, Yoshinoir Shibata, Kiyoshi Yuyama, Yoshikazu Katai, Ryuichi Takeuchi, Takeshi Hoshino, Shinobu Yoshimura, Hirohisa Noguchi, Manish Gupta, John A. Gunnels, Vernon Austel, Yogish Sabharwal, Rahul Garg, Shoji Kato, Takashi Kawakami, Satoru Todokoro, Junko Ikeda: Gordon Bell finalists I - Large scale drop impact analysis of mobile phone using ADVC on Blue Gene/L. SC 2006: 46
2005
24	EE	George S. Almasi, Gyan Bhanot, Dong Chen, Maria Eleftheriou, Blake G. Fitch, Alan Gara, Robert S. Germain, John A. Gunnels, Manish Gupta, Philip Heidelberger, Michael Pitman, Aleksandr Rayshubskiy, James C. Sexton, Frank Suits, Pavlos Vranas, Robert Walkup, T. J. Christopher Ward, Yuriy Zhestkov, Alessandro Curioni, Wanda Andreoni, Charles Archer, José E. Moreira, Richard Loft, Henry M. Tufo, Theron Voran, Katherine Riley: Early Experience with Scientific Applications on the Blue Gene/L Supercomputer. Euro-Par 2005: 560-570
23	EE	François Gygi, Robert K. Yates, Juergen Lorenz, Erik W. Draeger, Franz Franchetti, Christoph W. Ueberhuber, Bronis R. de Supinski, Stefan Kral, John A. Gunnels, James C. Sexton: Large-Scale First-Principles Molecular Dynamics simulations on the BlueGene/L Platform using the Qbox code. SC 2005: 24
22	EE	Paolo Bientinesi, John A. Gunnels, Margaret E. Myers, Enrique S. Quintana-Ortí, Robert A. van de Geijn: The science of deriving dense linear algebra algorithms. ACM Trans. Math. Softw. 31(1): 1-26 (2005)
21	EE	Bjarne Stig Andersen, John A. Gunnels, Fred G. Gustavson, John K. Reid, Jerzy Wasniewski: A fully portable high performance minimal storage hybrid format cholesky algorithm. ACM Trans. Math. Softw. 31(2): 201-227 (2005)
20	EE	Siddhartha Chatterjee, Leonardo R. Bachega, Peter Bergner, Kenneth A. Dockser, John A. Gunnels, Manish Gupta, Fred G. Gustavson, Christopher A. Lapkowski, Gary K. Liu, Mark P. Mendell, Rohini D. Nair, Charles D. Wait, T. J. Christopher Ward, Peng Wu: Design and exploitation of a high-performance SIMD floating-point unit for Blue Gene/L. IBM Journal of Research and Development 49(2-3): 377-392 (2005)
19	EE	George Almási, Charles Archer, José G. Castaños, John A. Gunnels, C. Christopher Erway, Philip Heidelberger, Xavier Martorell, José E. Moreira, Kurt W. Pinnow, Joe Ratterman, Burkhard D. Steinmacher-Burow, William Gropp, Brian R. Toonen: Design and implementation of message-passing services for the Blue Gene/L supercomputer. IBM Journal of Research and Development 49(2-3): 393-406 (2005)
18	EE	Xavier Martorell, Nils Smeds, Robert Walkup, José R. Brunheroto, George Almási, John A. Gunnels, Luiz De Rose, Jesús Labarta, Francesc Escalé, Judit Gimenez, Harald Servat, José E. Moreira: Blue Gene/L performance tools. IBM Journal of Research and Development 49(2-3): 407-424 (2005)
2004
17	EE	Leonardo R. Bachega, Siddhartha Chatterjee, Kenneth A. Dockser, John A. Gunnels, Manish Gupta, Fred G. Gustavson, Christopher A. Lapkowski, Gary K. Liu, Mark P. Mendell, Charles D. Wait, T. J. Christopher Ward: A High-Performance SIMD Floating Point Unit for BlueGene/L: Architecture, Compilation, and Algorithm Design. IEEE PACT 2004: 85-96
16	EE	John A. Gunnels, Fred G. Gustavson: A New Array Format for Symmetric and Triangular Matrices. PARA 2004: 247-255
15	EE	John A. Gunnels, Fred G. Gustavson, Greg Henry, Robert A. van de Geijn: A Family of High-Performance Matrix Multiplication Algorithms. PARA 2004: 256-265
14	EE	Paolo Bientinesi, John A. Gunnels, Fred G. Gustavson, Greg Henry, Margaret E. Myers, Enrique S. Quintana-Ortí, Robert A. van de Geijn: Rapid Development of High-Performance Linear Algebra Libraries. PARA 2004: 376-384
13	EE	George Almási, Charles Archer, John A. Gunnels, Philip Heidelberger, Xavier Martorell, José E. Moreira: Architecture and Performance of the BlueGene/L Message Layer. PVM/MPI 2004: 405-414
12	EE	George Almási, Siddhartha Chatterjee, Alan Gara, John A. Gunnels, Manish Gupta, Amy Henning, José E. Moreira, Robert Walkup: Unlocking the Performance of the BlueGene/L Supercomputer. SC 2004: 57
2002
11	EE	Bjarne Stig Andersen, John A. Gunnels, Fred G. Gustavson, Jerzy Wasniewski: A Recursive Formulation of the Inversion of Symmetric Positive Definite Matrices in Packed Storage Data Format. PARA 2002: 287-296
10	EE	Narasimha R. Adiga, George Almási, George S. Almasi, Yariv Aridor, Rajkishore Barik, Daniel K. Beece, Ralph Bellofatto, Gyan Bhanot, Randy Bickford, Matthias A. Blumrich, Arthur A. Bright, José R. Brunheroto, Calin Cascaval, José G. Castaños, W. Chan, Luis Ceze, Paul Coteus, Siddhartha Chatterjee, Dong Chen, George L.-T. Chiu, Thomas M. Cipolla, Paul Crumley, K. M. Desai, Alina Deutsch, Tamar Domany, Marc Boris Dombrowa, Wilm E. Donath, Maria Eleftheriou, C. Christopher Erway, J. Esch, Blake G. Fitch, Joseph Gagliano, Alan Gara, Rahul Garg, Robert S. Germain, Mark Giampapa, Balaji Gopalsamy, John A. Gunnels, Manish Gupta, Fred G. Gustavson, Shawn Hall, Ruud A. Haring, David F. Heidel, Philip Heidelberger, Lorraine Herger, Dirk Hoenicke, R. D. Jackson, T. Jamal-Eddine, Gerard V. Kopcsay, Elie Krevat, Manish P. Kurhekar, Alphonso P. Lanzetta, Derek Lieber, L. K. Liu, M. Lu, Mark P. Mendell, A. Misra, Y. Moatti, Lawrence S. Mok, José E. Moreira, Ben J. Nathanson, Matthew Newton, Martin Ohmacht, Adam J. Oliner, Vinayaka Pandit, R. B. Pudota, Rick A. Rand, Richard D. Regan, Bradley Rubin, Albert E. Ruehli, Silvius Rus, Ramendra K. Sahoo, Alda Sanomiya, Eugen Schenfeld, M. Sharma, Edi Shmueli, Sarabjeet Singh, Peilin Song, Vijay Srinivasan, Burkhard D. Steinmacher-Burow, Karin Strauss, Christopher W. Surovic, Richard A. Swetz, Todd Takken, R. Brett Tremaine, Mickey Tsao, Arun R. Umamaheshwaran, P. Verma, Pavlos Vranas, T. J. Christopher Ward, Michael E. Wazlowski, W. Barrett, C. Engel, B. Drehmel, B. Hilgart, D. Hill, F. Kasemkhani, David J. Krolak, C. T. Li, Thomas A. Liebsch, James A. Marcella, A. Muff, A. Okomo, M. Rouse, A. Schram, M. Tubbs, G. Ulsh, Charles D. Wait, J. Wittrup, M. Bae, Kenneth A. Dockser, Lynn Kissel, Mark K. Seager, Jeffrey S. Vetter, K. Yates: An overview of the BlueGene/L Supercomputer. SC 2002: 1-22
2001
9	EE	John A. Gunnels, Robert A. van de Geijn, Daniel S. Katz, Enrique S. Quintana-Ortí: Fault-Tolerant High-Performance Matrix Multiplication: Theory and Practice. DSN 2001: 47-56
8	EE	John A. Gunnels, Greg Henry, Robert A. van de Geijn: A Family of High-Performance Matrix Multiplication Algorithms. International Conference on Computational Science (1) 2001: 51-60
7	EE	John A. Gunnels, Fred G. Gustavson, Greg Henry, Robert A. van de Geijn: FLAME: Formal Linear Algebra Methods Environment. ACM Trans. Math. Softw. 27(4): 422-455 (2001)
2000
6		John A. Gunnels, Robert A. van de Geijn: Formal Methods for High-Performance Linear Algebra Libraries. The Architecture of Scientific Software 2000: 193-210
1998
5	EE	Gregory S. Baker, John A. Gunnels, Greg Morrow, Béatrice Riviére, Robert A. van de Geijn: PLAPACK: High Performance through High-Level Abstraction. ICPP 1998: 414-
4	EE	John A. Gunnels, Calvin Lin, Greg Morrow, Robert A. van de Geijn: A Flexible Class of Parallel Matrix Multiplication Algorithms. IPPS/SPDP 1998: 110-116
1997
3		Phillip Alpatov, Gregory S. Baker, Carter Edwards, John A. Gunnels, Greg Morrow, James Overfelt, Robert A. van de Geijn, Yuan-Jye J. Wu: PLAPACK: Parallel Linear Algebra Package. PPSC 1997
2		Almadena Yu. Chtchelkanova, John A. Gunnels, Greg Morrow, James Overfelt, Robert A. van de Geijn: Parallel implementation of BLAS: general techniques for Level 3 BLAS. Concurrency - Practice and Experience 9(9): 837-857 (1997)
1994
1		John A. Gunnels, Paul Cull, J. L. Holloway: Genetic Algorithms and Simulated Annealing for Gene Mapping. International Conference on Evolutionary Computation 1994: 385-390

Coauthor Index

1	Narasimha R. Adiga	[10]
2	Prashant Agrawal	[33]
3	Hiroshi Akiba	[25]
4	George Almási (George S. Almasi)	[10] [12] [13] [18] [19] [24]
5	Phillip Alpatov	[3]
6	Bjarne Stig Andersen	[11] [21]
7	Wanda Andreoni	[24]
8	Charles Archer	[13] [19] [24]
9	Yariv Aridor	[10]
10	Vernon Austel	[25] [26]
11	Leonardo R. Bachega	[17] [20]
12	M. Bae	[10]
13	Gregory S. Baker	[3] [5]
14	Rajkishore Barik	[10]
15	W. Barrett	[10]
16	Daniel K. Beece	[10]
17	Ralph Bellofatto	[10]
18	Brad Benton	[34]
19	Peter Bergner	[20]
20	Gyan Bhanot	[10] [24]
21	Abhinav Bhatele	[31]
22	Randy Bickford	[10]
23	Paolo Bientinesi	[14] [22]
24	Matthias A. Blumrich	[10]
25	Eric J. Bohm	[31]
26	Arthur A. Bright	[10]
27	Daniel A. Brokenshire	[34]
28	José R. Brunheroto	[10] [18]
29	Calin Cascaval	[10]
30	K. J. Caspersen	[30]
31	José G. Castaños	[10] [19]
32	Luis Ceze	[10]
33	W. Chan	[10]
34	Siddhartha Chatterjee	[10] [12] [17] [20]
35	Dong Chen	[10] [24]
36	George L.-T. Chiu	[10]
37	Almadena Yu. Chtchelkanova	[2]
38	Thomas M. Cipolla	[10]
39	Paul Coteus	[10]
40	Paul Crumley	[10]
41	Paul Cull	[1]
42	Alessandro Curioni	[24]
43	K. M. Desai	[10]
44	Alina Deutsch	[10]
45	Kenneth A. Dockser	[10] [17] [20]
46	Tamar Domany	[10]
47	Marc Boris Dombrowa	[10]
48	Wilm E. Donath	[10]
49	Erik W. Draeger	[23] [26]
50	B. Drehmel	[10]
51	Carter Edwards	[3]
52	Maria Eleftheriou	[10] [24]
53	C. Engel	[10]
54	C. Christopher Erway	[10] [19]
55	Francesc Escalé	[18]
56	J. Esch	[10]
57	Blake G. Fitch	[10] [24]
58	Franz Franchetti	[23] [26]
59	Joseph Gagliano	[10]
60	Alan Gara	[10] [12] [24]
61	Rahul Garg	[10] [25] [32]
62	Saurabh K. Garg	[32]
63	Vijay K. Garg	[33]
64	Robert A. van de Geijn	[2] [3] [4] [5] [6] [7] [8] [9] [14] [15] [22]
65	Robert S. Germain	[10] [24]
66	Mark Giampapa	[10]
67	Judit Gimenez	[18]
68	James N. Glosli	[30]
69	Balaji Gopalsamy	[10]
70	William Gropp (William D. Gropp, Bill Gropp)	[19]
71	Manish Gupta	[10] [12] [17] [20] [24] [25]
72	Fred G. Gustavson	[7] [10] [11] [14] [15] [16] [17] [20] [21] [27] [28] [29]
73	François Gygi	[23] [26]
74	Shawn Hall	[10]
75	Ruud A. Haring	[10]
76	David F. Heidel	[10]
77	Philip Heidelberger	[10] [13] [19] [24]
78	Amy Henning	[12]
79	Greg Henry	[7] [8] [14] [15]
80	Lorraine Herger	[10]
81	B. Hilgart	[10]
82	D. Hill	[10]
83	Dirk Hoenicke	[10]
84	J. L. Holloway	[1]
85	Takeshi Hoshino	[25]
86	Junko Ikeda	[25]
87	R. D. Jackson	[10]
88	T. Jamal-Eddine	[10]
89	Laxmikant V. Kalé	[31]
90	F. Kasemkhani	[10]
91	Yoshikazu Katai	[25]
92	Shoji Kato	[25]
93	Daniel S. Katz	[9]
94	Takashi Kawakami	[25]
95	Lynn Kissel	[10]
96	Michael Kistler	[34]
97	Gerard V. Kopcsay	[10]
98	Stefan Kral	[23] [26]
99	Elie Krevat	[10]
100	David J. Krolak	[10]
101	Sameer Kumar	[31]
102	Manish P. Kurhekar	[10]
103	Vimitha A. Kuruvilla	[33]
104	Jesús Labarta	[18]
105	Alphonso P. Lanzetta	[10]
106	Christopher A. Lapkowski	[17] [20]
107	C. T. Li	[10]
108	Derek Lieber	[10]
109	Thomas A. Liebsch	[10]
110	Calvin Lin	[4]
111	Gary K. Liu	[17] [20]
112	L. K. Liu	[10]
113	Richard Loft	[24]
114	Juergen Lorenz	[23] [26]
115	M. Lu	[10]
116	James A. Marcella	[10]
117	Xavier Martorell	[13] [18] [19]
118	Glenn J. Martyna	[31]
119	Mark P. Mendell	[10] [17] [20]
120	A. Misra	[10]
121	Y. Moatti	[10]
122	Lawrence S. Mok	[10]
123	José E. Moreira	[10] [12] [13] [18] [19] [24]
124	Greg Morrow	[2] [3] [4] [5]
125	A. Muff	[10]
126	Margaret E. Myers	[14] [22]
127	Rohini D. Nair	[20]
128	Ben J. Nathanson	[10]
129	Matthew Newton	[10]
130	Hirohisa Noguchi	[25]
131	Martin Ohmacht	[10]
132	Tomonobu Ohyama	[25]
133	A. Okomo	[10]
134	Adam J. Oliner	[10]
135	James Overfelt	[2] [3]
136	Vinayaka Pandit	[10]
137	Keshav Pingali	[27] [29]
138	Kurt W. Pinnow	[19]
139	Michael Pitman	[24]
140	R. B. Pudota	[10]
141	Enrique S. Quintana-Ortí	[9] [14] [22]
142	Rick A. Rand	[10]
143	Joe Ratterman	[19]
144	Aleksandr Rayshubskiy	[24]
145	Richard D. Regan	[10]
146	John K. Reid (J. K. Reid)	[21]
147	D. F. Richards	[30]
148	Katherine Riley	[24]
149	Béatrice Riviére	[5]
150	Thomas Roeder	[29]
151	Luiz De Rose	[18]
152	M. Rouse	[10]
153	Bradley Rubin	[10]
154	R. E. Rudd	[30]
155	Albert E. Ruehli	[10]
156	Silvius Rus	[10]
157	Yogish Sabharwal	[25] [32] [33]
158	Ramendra K. Sahoo	[10] [32]
159	Alda Sanomiya	[10]
160	Vaibhav Saxena	[33]
161	Eugen Schenfeld	[10]
162	A. Schram	[10]
163	Martin Schulz	[26]
164	Mark K. Seager	[10]
165	Harald Servat	[18]
166	James C. Sexton	[23] [24] [26] [28]
167	M. Sharma	[10]
168	Yoshinoir Shibata	[25]
169	Edi Shmueli	[10]
170	Sarabjeet Singh	[10]
171	Nils Smeds	[18]
172	Peilin Song	[10]
173	Vijay Srinivasan	[10]
174	Burkhard D. Steinmacher-Burow	[10] [19]
175	Karin Strauss	[10]
176	Frederick H. Streitz	[30]
177	Frank Suits	[24]
178	Bronis R. de Supinski	[23] [26]
179	Christopher W. Surovic	[10]
180	Richard A. Swetz	[10]
181	Ryuichi Takeuchi	[25]
182	Todd Takken	[10]
183	Satoru Todokoro	[25]
184	Brian R. Toonen	[19]
185	R. Brett Tremaine	[10]
186	Mickey Tsao	[10]
187	M. Tubbs	[10]
188	Mark E. Tuckerman	[31]
189	Henry M. Tufo	[24]
190	Christoph W. Ueberhuber	[23] [26]
191	G. Ulsh	[10]
192	Arun R. Umamaheshwaran	[10]
193	P. Verma	[10]
194	Jeffrey S. Vetter	[10]
195	Theron Voran	[24]
196	Pavlos Vranas	[10] [24]
197	Charles D. Wait	[10] [17] [20]
198	Robert Walkup	[12] [18] [24]
199	T. J. Christopher Ward	[10] [17] [20] [24]
200	Jerzy Wasniewski	[11] [21]
201	Michael E. Wazlowski	[10]
202	J. Wittrup	[10]
203	Peng Wu	[20]
204	Yuan-Jye J. Wu	[3]
205	K. Yates	[10]
206	Robert K. Yates	[23]
207	Shinobu Yoshimura	[25]
208	Kamen Yotov	[27] [29]
209	Kiyoshi Yuyama	[25]
210	Yuriy Zhestkov	[24]

Colors in the list of coauthors