| 2006 |
|---|
| 5 | EE | Kenzie D. MacIsaac,
Ting Wang,
D. Benjamin Gordon,
David K. Gifford,
Gary D. Stormo,
Ernest Fraenkel:
An improved map of conserved regulatory sites for Saccharomyces cerevisiae.
BMC Bioinformatics 7: 113 (2006) |
| 4 | EE | Kenzie D. MacIsaac,
D. Benjamin Gordon,
Lena Nekludova,
Duncan T. Odom,
Joerg Schreiber,
David K. Gifford,
Richard A. Young,
Ernest Fraenkel:
A hypothesis-based approach for identifying the binding specificity of regulatory proteins from chromatin immunoprecipitation data.
Bioinformatics 22(4): 423-429 (2006) |
| 2005 |
|---|
| 3 | EE | D. Benjamin Gordon,
Lena Nekludova,
Scott McCallum,
Ernest Fraenkel:
TAMO: a flexible, object-oriented framework for analyzing transcriptional regulation using DNA-sequence motifs.
Bioinformatics 21(14): 3164-3165 (2005) |
| 2003 |
|---|
| 2 | EE | D. Benjamin Gordon,
Geoffrey K. Hom,
Stephen L. Mayo,
Niles A. Pierce:
Exact rotamer optimization for protein design.
Journal of Computational Chemistry 24(2): 232-243 (2003) |
| 1998 |
|---|
| 1 | EE | D. Benjamin Gordon,
Stephen L. Mayo:
Radical performance enhancements for combinatorial optimization algorithms based on the dead-end elimination theorem.
Journal of Computational Chemistry 19(13): 1505-1514 (1998) |
