Chris H. Q. Ding

Hong Q. Ding

2007
71	EE	Yi Zhang, Chris H. Q. Ding, Tao Li: A Two-Stage Gene Selection Algorithm by Combining ReliefF and mRMR. BIBE 2007: 164-171
70	EE	Chris H. Q. Ding, Tao Li: Adaptive dimension reduction using discriminant analysis and K-means clustering. ICML 2007: 521-528
69	EE	Wei Peng, Chris H. Q. Ding, Tao Li, Tong Sun: Finding Hotspots in Document Collection. ICTAI (1) 2007: 313-320
68	EE	Chris H. Q. Ding, Rong Jin, Tao Li, Horst D. Simon: A learning framework using Green's function and kernel regularization with application to recommender system. KDD 2007: 260-269
2006
67		Chris H. Q. Ding, Tao Li, Wei Peng: Nonnegative Matrix Factorization and Probabilistic Latent Semantic Indexing: Equivalence Chi-Square Statistic, and a Hybrid Method. AAAI 2006
66	EE	Chris H. Q. Ding, Ya Zhang, Tao Li, Stephen R. Holbrook: Biclustering Protein Complex Interactions with a Biclique Finding Algorithm. ICDM 2006: 178-187
65	EE	Tao Li, Chris H. Q. Ding: The Relationships Among Various Nonnegative Matrix Factorization Methods for Clustering. ICDM 2006: 362-371
64	EE	Chris H. Q. Ding, Ding Zhou, Xiaofeng He, Hongyuan Zha: R1-PCA: rotational invariant L1-norm principal component analysis for robust subspace factorization. ICML 2006: 281-288
63	EE	Chris H. Q. Ding, Tao Li, Wei Peng, Haesun Park: Orthogonal nonnegative matrix t-factorizations for clustering. KDD 2006: 126-135
62	EE	Chris H. Q. Ding, Tao Li, Wei Peng: NMF and PLSI: equivalence and a hybrid algorithm. SIGIR 2006: 641-642
61	EE	Chunlin Wang, Chris H. Q. Ding, Richard F. Meraz, Stephen R. Holbrook: PSoL: a positive sample only learning algorithm for finding non-coding RNA genes. Bioinformatics 22(21): 2590-2596 (2006)
60	EE	Andy M. Yip, Chris H. Q. Ding, Tony F. Chan: Dynamic Cluster Formation Using Level Set Methods. IEEE Trans. Pattern Anal. Mach. Intell. 28(6): 877-889 (2006)
59	EE	Chris H. Q. Ding, Xiaofeng He, Hui Xiong, Hanchuan Peng, Stephen R. Holbrook: Transitive closure and metric inequality of weighted graphs: detecting protein interaction modules using cliques. IJDMB 1(2): 162-177 (2006)
2005
58	EE	Keith Marsolo, Srinivasan Parthasarathy, Chris H. Q. Ding: A Multi-Level Approach to SCOP Fold Recognition. BIBE 2005: 57-64
57	EE	Chris H. Q. Ding, Xiaofeng He, Horst D. Simon: Nonnegative Lagrangian Relaxation of K-Means and Spectral Clustering. ECML 2005: 530-538
56	EE	Rong Jin, Chris H. Q. Ding, Feng Kang: A Probabilistic Approach for Optimizing Spectral Clustering. NIPS 2005
55	EE	Andy M. Yip, Chris H. Q. Ding, Tony F. Chan: Dynamic Cluster Formation Using Level Set Methods. PAKDD 2005: 388-398
54	EE	Chris H. Q. Ding, Xiaofeng He: Cluster Aggregate Inequality and Multi-level Hierarchical Clustering. PKDD 2005: 71-83
53	EE	Hui Xiong, Xiaofeng He, Chris H. Q. Ding, Ya Zhang, Vipin Kumar, Stephen R. Holbrook: Identification of Functional Modules in Protein Complexes via Hyperclique Pattern Discovery. Pacific Symposium on Biocomputing 2005
52		Chris H. Q. Ding, Jieping Ye: 2-Dimensional Singular Value Decomposition for 2D Maps and Images. SDM 2005
51		Chris H. Q. Ding, Xiaofeng He: On the Equivalence of Nonnegative Matrix Factorization and Spectral Clustering. SDM 2005
50	EE	Ya Zhang, John-Marc Chandonia, Chris H. Q. Ding, Stephen R. Holbrook: Comparative mapping of sequence-based and structure-based protein domains. BMC Bioinformatics 6: 77 (2005)
49	EE	Huan Liu, Edward R. Dougherty, Jennifer G. Dy, Kari Torkkola, Eugene Tuv, Hanchuan Peng, Chris H. Q. Ding, Fuhui Long, Michael E. Berens, Lance Parsons, Zheng Zhao, Lei Yu, George Forman: Evolving Feature Selection. IEEE Intelligent Systems 20(6): 64-76 (2005)
48	EE	Hanchuan Peng, Fuhui Long, Chris H. Q. Ding: Feature Selection Based on Mutual Information: Criteria of Max-Dependency, Max-Relevance, and Min-Redundancy. IEEE Trans. Pattern Anal. Mach. Intell. 27(8): 1226-1238 (2005)
47	EE	Parry Husbands, Horst D. Simon, Chris H. Q. Ding: Term norm distribution and its effects on Latent Semantic Indexing. Inf. Process. Manage. 41(4): 777-787 (2005)
46	EE	Chris H. Q. Ding, Hanchuan Peng: Minimum Redundancy Feature Selection from Microarray Gene Expression Data. J. Bioinformatics and Computational Biology 3(2): 185-206 (2005)
45	EE	Chris H. Q. Ding: A probabilistic model for Latent Semantic Indexing. JASIST 56(6): 597-608 (2005)
2004
44	EE	Richard F. Meraz, Xiaofeng He, Chris H. Q. Ding, Stephen R. Holbrook: Positive Sample Only Learning (PSOL) for Predicting RNA Genes in E. coli. CSB 2004: 535-538
43	EE	Chris H. Q. Ding, Richard F. Meraz, Xiaofeng He, Stephen R. Holbrook: Contraction Graphs for Representation and Analysis of RNA Secondary Structure. CSB 2004: 716-717
42	EE	Chris H. Q. Ding, Xiaofeng He: K-means clustering via principal component analysis. ICML 2004
41	EE	Chris H. Q. Ding, Xiaofeng He: Linearized cluster assignment via spectral ordering. ICML 2004
40	EE	Chris H. Q. Ding, Yun He: Integrating Program Component Executables on Distributed Memory Architectures via MPH. IPDPS 2004
39	EE	Chris H. Q. Ding, Xiaofeng He: Cluster Structure of K-means Clustering via Principal Component Analysis. PAKDD 2004: 414-418
38	EE	Chris H. Q. Ding, Xiaofeng He: K-nearest-neighbor consistency in data clustering: incorporating local information into global optimization. SAC 2004: 584-589
37	EE	Chris H. Q. Ding, Xiaofeng He: Principal Component Analysis and Effective K-Means Clustering. SDM 2004
2003
36	EE	Chris H. Q. Ding, Hanchuan Peng: Minimum Redundancy Feature Selection from Microarray Gene Expression Data. CSB 2003: 523-529
35	EE	Hanchuan Peng, Chris H. Q. Ding: Structure Search and Stability Enhancement of Bayesian Networks. ICDM 2003: 621-624
34		Chris H. Q. Ding: Data Clustering: Principal Components, Hopfield and Self-Aggregation Networks. IJCAI 2003: 479-484
33	EE	Chris H. Q. Ding, Xiaofeng He, Parry Husbands, Hongyuan Zha, Horst D. Simon: PageRank: HITS and a Unified Framework for Link Analysis. SDM 2003
32		Chris H. Q. Ding: Unsupervised Feature Selection Via Two-way Ordering in Gene Expression Analysis. Bioinformatics 19(10): 1259-1266 (2003)
2002
31	EE	Chris H. Q. Ding, Xiaofeng He: Cluster merging and splitting in hierarchical clustering algorithms. ICDM 2002: 139-146
30	EE	Chris H. Q. Ding, Xiaofeng He, Hongyuan Zha, Horst D. Simon: Adaptive dimension reduction for clustering high dimensional data. ICDM 2002: 147-154
29	EE	Chris H. Q. Ding, Xiaofeng He, Hongyuan Zha, Horst D. Simon: Unsupervised Learning: Self-aggregation in Scaled Principal Component Space. PKDD 2002: 112-124
28	EE	Chris H. Q. Ding: Analysis of gene expression profiles: class discovery and leaf ordering. RECOMB 2002: 127-136
27	EE	Yun He, Chris H. Q. Ding: MPI and OpenMP paradigms on cluster of SMP architectures: the vacancy tracking algorithm for multi-dimensional array transposition. SC 2002: 1-14
26	EE	Chris H. Q. Ding, Xiaofeng He, Parry Husbands, Hongyuan Zha, Horst D. Simon: PageRank, HITS and a unified framework for link analysis. SIGIR 2002: 353-354
25	EE	Yun He, Chris H. Q. Ding: An Evaluation of MPI and OpenMP Paradigms for Multi-Dimensional Data Remapping. WOMPAT 2002: 195-210
24	EE	Xiaofeng He, Hongyuan Zha, Chris H. Q. Ding, Horst D. Simon: Web document clustering using hyperlink structures. Computational Statistics & Data Analysis 41(1): 19-45 (2002)
2001
23		Hongyuan Zha, Xiaofeng He, Chris H. Q. Ding, Ming Gu, Horst D. Simon: Bipartite Graph Partitioning and Data Clustering. CIKM 2001: 25-32
22	EE	Chris H. Q. Ding, Xiaofeng He, Hongyuan Zha, Ming Gu, Horst D. Simon: A Min-max Cut Algorithm for Graph Partitioning and Data Clustering. ICDM 2001: 107-114
21	EE	Xiaofeng He, Chris H. Q. Ding, Hongyuan Zha, Horst D. Simon: Automatic Topic Identification Using Webpage Clustering. ICDM 2001: 195-202
20	EE	Chris H. Q. Ding, Xiaofeng He, Hongyuan Zha: A spectral method to separate disconnected and nearly-disconnected web graph components. KDD 2001: 275-280
19	EE	Hongyuan Zha, Xiaofeng He, Chris H. Q. Ding, Ming Gu, Horst D. Simon: Spectral Relaxation for K-means Clustering. NIPS 2001: 1057-1064
18	EE	Chris H. Q. Ding, Yun He: A ghost cell expansion method for reducing communications in solving PDE problems. SC 2001: 50
17		Chris H. Q. Ding, Inna Dubchak: Multi-class protein fold recognition using support vector machines and neural networks. Bioinformatics 17(4): 349-358 (2001)
16	EE	Hongyuan Zha, Xiaofeng He, Chris H. Q. Ding, Ming Gu, Horst D. Simon: Bipartite graph partitioning and data clustering CoRR cs.IR/0108018: (2001)
15	EE	Chris H. Q. Ding: An Optimal Index Reshuffle Algorithm for Multidimensional Arrays and Its Applications for Parallel Architectures. IEEE Trans. Parallel Distrib. Syst. 12(3): 306-315 (2001)
14		Erik Elmroth, Chris H. Q. Ding, Yu-Shu Wu: High Performance Computations for Large Scale Simulations of Subsurface Multiphase Fluid and Heat Flow. The Journal of Supercomputing 18(3): 235-258 (2001)
13		Yun He, Chris H. Q. Ding: Using Accurate Arithmetics to Improve Numerical Reproducibility and Stability in Parallel Applications. The Journal of Supercomputing 18(3): 259-277 (2001)
2000
12	EE	Yun He, Chris H. Q. Ding: Using accurate arithmetics to improve numerical reproducibility and stability in parallel applications. ICS 2000: 225-234
1999
11		Chris H. Q. Ding: Parallel Algorithms for 1D FFTs on Real Numbers. PPSC 1999
10	EE	Chris H. Q. Ding: A Similarity-based Probability Model for Latent Semantic Indexing. SIGIR 1999: 58-65
9	EE	Chris H. Q. Ding: High Performance Fortran for practical scientific algorithms: An up-to-date evaluation. Future Generation Comp. Syst. 15(3): 343-352 (1999)
1998
8		Chris H. Q. Ding, Peter M. Lyster, Jay Walter Larson, Jing Guo, Arlindo da Silva: Atmosperic Data Assimilation on Distributed-Memory Parallel Supercomputers. HPCN Europe 1998: 115-124
7		Chris H. Q. Ding: Evaluations of HPF for Practical Scientific Algorithms on T3E. HPCN Europe 1998: 223-232
1996
6	EE	Hong Q. Ding, Robert D. Ferraro: An Element-Based Concurrent Partitioner for Unstructured Finite Element Meshes. IPPS 1996: 601-605
1995
5	EE	Hong Q. Ding, Robert D. Ferraro: A general purpose sparse matrix parallel solvers package. IPPS 1995: 70-76
4		Hong Q. Ding, Robert D. Ferraro: A General Purpose Sparse Matrix Parallel Solvers Package. PPSC 1995: 492-493
3		Hong Q. Ding, Robert D. Ferraro: Slices: A Scalable Partitioner for Finite Element Meshes. PPSC 1995: 633-634
2		Hong Q. Ding, Robert D. Ferraro, Donald B. Gennery: A Portable 3D FFT Package for Distributed-Memory Parallel Architectures. PPSC 1995: 70-71
1993
1	EE	Hong Q. Ding: Monte Carlo simulations of Quantum systems on massively parallel computers. SC 1993: 34-43

Coauthor Index

1	Michael E. Berens	[49]
2	Tony F. Chan	[55] [60]
3	John-Marc Chandonia	[50]
4	Edward R. Dougherty	[49]
5	Inna Dubchak	[17]
6	Jennifer G. Dy	[49]
7	Erik Elmroth	[14]
8	Robert D. Ferraro	[2] [3] [4] [5] [6]
9	George Forman	[49]
10	Donald B. Gennery	[2]
11	Ming Gu	[16] [19] [22] [23]
12	Jing Guo	[8]
13	Xiaofeng He	[16] [19] [20] [21] [22] [23] [24] [26] [29] [30] [31] [33] [37] [38] [39] [41] [42] [43] [44] [51] [53] [54] [57] [59] [64]
14	Yun He	[12] [13] [18] [25] [27] [40]
15	Stephen R. Holbrook	[43] [44] [50] [53] [59] [61] [66]
16	Parry Husbands	[26] [33] [47]
17	Rong Jin	[56] [68]
18	Feng Kang	[56]
19	Vipin Kumar	[53]
20	Jay Walter Larson	[8]
21	Tao Li	[62] [63] [65] [66] [67] [68] [69] [70] [71]
22	Huan Liu	[49]
23	Fuhui Long	[48] [49]
24	Peter M. Lyster	[8]
25	Keith Marsolo	[58]
26	Richard F. Meraz	[43] [44] [61]
27	Haesun Park	[63]
28	Lance Parsons	[49]
29	Srinivasan Parthasarathy	[58]
30	Hanchuan Peng	[35] [36] [46] [48] [49] [59]
31	Wei Peng	[62] [63] [67] [69]
32	Arlindo da Silva	[8]
33	Horst D. Simon	[16] [19] [21] [22] [23] [24] [26] [29] [30] [33] [47] [57] [68]
34	Tong Sun	[69]
35	Kari Torkkola	[49]
36	Eugene Tuv	[49]
37	Chunlin Wang	[61]
38	Yu-Shu Wu	[14]
39	Hui Xiong	[53] [59]
40	Jieping Ye	[52]
41	Andy M. Yip	[55] [60]
42	Lei Yu	[49]
43	Hongyuan Zha	[16] [19] [20] [21] [22] [23] [24] [26] [29] [30] [33] [64]
44	Ya Zhang	[50] [53] [66]
45	Yi Zhang	[71]
46	Zheng Zhao	[49]
47	Ding Zhou	[64]

Colors in the list of coauthors