Volume 41,
Number 1,
February 2008
- Jau-Huei Lin, Peter J. Haug:
Exploiting missing clinical data in Bayesian network modeling for predicting medical problems.
1-14
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- Fatma Latifoglu, Kemal Polat, Sadik Kara, Salih Günes:
Medical diagnosis of atherosclerosis from Carotid Artery Doppler Signals using principal component analysis (PCA), k-NN based weighting pre-processing and Artificial Immune Recognition System (AIRS).
15-23
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- Paolo Contiero, Andrea Tittarelli, Anna Maghini, Sabrina Fabiano, Emanuela Frassoldi, Enrica Costa, Daniela Gada, Tiziana Codazzi, Paolo Crosignani, Roberto Tessandori, Giovanna Tagliabue:
Comparison with manual registration reveals satisfactory completeness and efficiency of a computerized cancer registration system.
24-32
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- Joan Valls, Mònica Grau, Xavier Solé, Pilar Hernández, David Montaner, Joaquín Dopazo, Miguel A. Peinado, Gabriel Capellá, Víctor Moreno, Miguel Angel Pujana:
CLEAR-test: Combining inference for differential expression and variability in microarray data analysis.
33-45
Electronic Edition (link) BibTeX
- Guy Tsafnat:
The Field Representation Language.
46-57
Electronic Edition (link) BibTeX
- M. Elliot, K. Purdam, D. Smith:
Statistical disclosure control architectures for patient records in biomedical information systems.
58-64
Electronic Edition (link) BibTeX
- Razib M. Othman, Safaai Deris, Rosli M. Illias:
A genetic similarity algorithm for searching the Gene Ontology terms and annotating anonymous protein sequences.
65-81
Electronic Edition (link) BibTeX
- Magnus Irestig, Toomas Timpka:
Politics and technology in health information systems development: A discourse analysis of conflicts addressed in a systems design group.
82-94
Electronic Edition (link) BibTeX
- Hau-San Wong, Hong-Qiang Wang:
Constructing the gene regulation-level representation of microarray data for cancer classification.
95-105
Electronic Edition (link) BibTeX
- George A. Komatsoulis, Denise B. Warzel, Francis W. Hartel, Krishnakant Shanbhag, Ram Chilukuri, Gilberto Fragoso, Sherri de Coronado, Dianne M. Reeves, Jillaine B. Hadfield, Christophe Ludet, Peter A. Covitz:
caCORE version 3: Implementation of a model driven, service-oriented architecture for semantic interoperability.
106-123
Electronic Edition (link) BibTeX
- Hyunjin Shin, Bryan Sheu, Maria Joseph, Mia K. Markey:
Guilt-by-association feature selection: Identifying biomarkers from proteomic profiles.
124-136
Electronic Edition (link) BibTeX
- A. Narasimhadevara, Thiruvengadam Radhakrishnan, B. Leung, R. Jayakumar:
On designing a usable interactive system to support transplant nursing.
137-151
Electronic Edition (link) BibTeX
- Nathan C. Hulse, Guilherme Del Fiol, Richard L. Bradshaw, Lorrie K. Roemer, Roberto A. Rocha:
Towards an on-demand peer feedback system for a clinical knowledge base: A case study with order sets.
152-164
Electronic Edition (link) BibTeX
- Themis P. Exarchos, Costas Papaloukas, Christos Lampros, Dimitrios I. Fotiadis:
Mining sequential patterns for protein fold recognition.
165-179
Electronic Edition (link) BibTeX
- Mor Peleg, Sagi Keren, Yaron Denekamp:
Mapping computerized clinical guidelines to electronic medical records: Knowledge-data ontological mapper (KDOM).
180-201
Electronic Edition (link) BibTeX
- Theodosios Theodosiou, Lefteris Angelis, Athena Vakali:
Non-linear correlation of content and metadata information extracted from biomedical article datasets.
202-216
Electronic Edition (link) BibTeX
Volume 41,
Number 2,
April 2008
- Lefteris Gortzis, George Nikiforidis:
Tracing and cataloguing knowledge in an e-health cardiology environment.
217-223
Electronic Edition (link) BibTeX
- Yanna Shen, Christina Adamou, John N. Dowling, Gregory F. Cooper:
Estimating the joint disease outbreak-detection time when an automated biosurveillance system is augmenting traditional clinical case finding.
224-231
Electronic Edition (link) BibTeX
- Jihun Kim, Hee-Joon Chung, Yong Jung, Kack-Kyun Kim, Ju Han Kim:
BioLattice: A framework for the biological interpretation of microarray gene expression data using concept lattice analysis.
232-241
Electronic Edition (link) BibTeX
- Susan Maskery, Hai Hu, Jeffrey Hooke, Craig D. Shriver, Michael N. Liebman:
A Bayesian derived network of breast pathology co-occurrence.
242-250
Electronic Edition (link) BibTeX
- Ion-Florin Talos, Daniel L. Rubin, Michael Halle, Mark A. Musen, Ron Kikinis:
A prototype symbolic model of canonical functional neuroanatomy of the motor system.
251-263
Electronic Edition (link) BibTeX
- Xingwei Wang, Shibo Li, Hong Liu, Marc Wood, Wei R. Chen, Bin Zheng:
Automated identification of analyzable metaphase chromosomes depicted on microscopic digital images.
264-271
Electronic Edition (link) BibTeX
- Bo Geng, Xiaobo Zhou, Jinmin Zhu, Y. S. Hung, Stephen T. C. Wong:
Comparison of reversible-jump Markov-chain-Monte-Carlo learning approach with other methods for missing enzyme identification.
272-281
Electronic Edition (link) BibTeX
- Waclaw Kusnierczyk:
Taxonomy-based partitioning of the Gene Ontology.
282-292
Electronic Edition (link) BibTeX
- Yan Chen, Yehoshua Perl, James Geller, George Hripcsak, Li Zhang:
Comparing and consolidating two heuristic metaschemas.
293-317
Electronic Edition (link) BibTeX
- Siriwan Suebnukarn, Peter Haddawy, Phattanapon Rhienmora:
A collaborative medical case authoring environment based on the UMLS.
318-326
Electronic Edition (link) BibTeX
- Sofie Pilemalm, Toomas Timpka:
Third generation participatory design in health informatics - Making user participation applicable to large-scale information system projects.
327-339
Electronic Edition (link) BibTeX
- Hsin-Min Lu, Daniel Zeng, Lea Trujillo, Ken Komatsu, Hsinchun Chen:
Ontology-enhanced automatic chief complaint classification for syndromic surveillance.
340-356
Electronic Edition (link) BibTeX
- Peter W. Hung, Stephen B. Johnson, David R. Kaufman, Eneida A. Mendonça:
A multi-level model of information seeking in the clinical domain.
357-370
Electronic Edition (link) BibTeX
- Chih-Lin Chi, W. Nick Street, Marcia M. Ward:
Building a hospital referral expert system with a Prediction and Optimization-Based Decision Support System algorithm.
371-386
Electronic Edition (link) BibTeX
- Dean F. Sittig, Adam Wright, Jerome A. Osheroff, Blackford Middleton, Jonathan M. Teich, Joan S. Ash, Emily Campbell, David W. Bates:
Grand challenges in clinical decision support.
387-392
Electronic Edition (link) BibTeX
Methodological Review
Volume 41,
Number 3,
June 2008
Computerized Decision Support for Critical and Emergency Care
Methodological Reviews
Research Papers
- Anton Aboukhalil, Larry Nielsen, Mohammed Saeed, Roger G. Mark, Gari D. Clifford:
Reducing false alarm rates for critical arrhythmias using the arterial blood pressure waveform.
442-451
Electronic Edition (link) BibTeX
- Ying Zhang, Peter Szolovits:
Patient-specific learning in real time for adaptive monitoring in critical care.
452-460
Electronic Edition (link) BibTeX
- D. Sorenson, C. K. Grissom, L. Carpenter, A. Austin, K. Sward, L. Napoli, H. R. Warner, A. H. Morris:
A frame-based representation for a bedside ventilator weaning protocol.
461-468
Electronic Edition (link) BibTeX
- Liangyou Chen, Thomas M. McKenna, Andrew T. Reisner, Andrei V. Gribok, Jaques Reifman:
Decision tool for the early diagnosis of trauma patient hypovolemia.
469-478
Electronic Edition (link) BibTeX
- Madhu C. Reddy, M. Michael Shabot, Erin Bradner:
Evaluating collaborative features of critical care systems: A methodological study of information technology in surgical intensive care units.
479-487
Electronic Edition (link) BibTeX
- K. Sward, J. Orme Jr., D. Sorenson, L. Baumann, A. H. Morris:
Reasons for declining computerized insulin protocol recommendations: Application of a framework.
488-497
Electronic Edition (link) BibTeX
Volume 41,
Number 4,
August 2008
- Muhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence S. Dooley, Ross L. Coppel:
Ameliorative missing value imputation for robust biological knowledge inference.
499-514
Electronic Edition (link) BibTeX
- Marcel van Gerven, Babs G. Taal, Peter J. F. Lucas:
Dynamic Bayesian networks as prognostic models for clinical patient management.
515-529
Electronic Edition (link) BibTeX
- Xiaogang Ruan, Jinlian Wang, Hui Li, Rhoda E. Perozzi, Edmund F. Perozzi:
The use of logic relationships to model colon cancer gene expression networks with mRNA microarray data.
530-543
Electronic Edition (link) BibTeX
- P. Berchialla, A. Stancu, C. Scarinzi, S. Snidero, R. Corradetti, D. Gregori:
Web-based tool for injury risk assessment of foreign body injuries in children.
544-556
Electronic Edition (link) BibTeX
- Isabella Scandurra, Maria Hägglund, Sabine Koch:
From user needs to system specifications: Multi-disciplinary thematic seminars as a collaborative design method for development of health information systems.
557-569
Electronic Edition (link) BibTeX
- Hsi-Che Liu, Chien-Yu Chen, Yu-Ting Liu, Cheng-Bang Chu, Der-Cherng Liang, Lee-Yung Shih, Chih-Jen Lin:
Cross-generation and cross-laboratory predictions of Affymetrix microarrays by rank-based methods.
570-579
Electronic Edition (link) BibTeX
- Zhihao Yang, Hongfei Lin, Yanpeng Li:
Exploiting the contextual cues for bio-entity name recognition in biomedical literature.
580-587
Electronic Edition (link) BibTeX
- Igor Trajkovski, Nada Lavrac, Jakub Tolar:
SEGS: Search for enriched gene sets in microarray data.
588-601
Electronic Edition (link) BibTeX
- Weixiang Liu, Kehong Yuan, Datian Ye:
Reducing microarray data via nonnegative matrix factorization for visualization and clustering analysis.
602-606
Electronic Edition (link) BibTeX
- C. George Priya Doss, C. Sudandiradoss, R. Rajasekaran, Rituraj Purohit, K. Ramanathan, Rao Sethumadhavan:
Identification and structural comparison of deleterious mutations in nsSNPs of ABL1 gene in chronic myeloid leukemia: A bio-informatics study.
607-612
Electronic Edition (link) BibTeX
- Jagan Dara, John N. Dowling, Debbie Travers, Gregory F. Cooper, Wendy Webber Chapman:
Evaluation of preprocessing techniques for chief complaint classification.
613-623
Electronic Edition (link) BibTeX
- Cornelia M. Ruland, Justin Starren, Torun M. Vatne:
Participatory design with children in the development of a support system for patient-centered care in pediatric oncology.
624-635
Electronic Edition (link) BibTeX
- Ben Medlock:
Exploring hedge identification in biomedical literature.
636-654
Electronic Edition (link) BibTeX
- Guilherme Del Fiol, Peter J. Haug:
Infobuttons and classification models: A method for the automatic selection of on-line information resources to fulfill clinicians' information needs.
655-666
Electronic Edition (link) BibTeX
- Vladimir Brtka, Edith Stokic, Biljana Srdic:
Automated extraction of decision rules for leptin dynamics - A rough sets approach.
667-674
Electronic Edition (link) BibTeX
- Aykut M. Uslu, Jürgen Stausberg:
Value of the electronic patient record: An analysis of the literature.
675-682
Electronic Edition (link) BibTeX
Volume 41,
Number 5,
October 2008
- Kei-Hoi Cheung, Vipul Kashyap, Joanne Luciano, Huajun Chen, Yimin Wang, Susie Stephens:
Semantic mashup of biomedical data.
683-686
Electronic Edition (link) BibTeX
- Carole A. Goble, Robert Stevens:
State of the nation in data integration for bioinformatics.
687-693
Electronic Edition (link) BibTeX
- Kei-Hoi Cheung, Kevin Y. Yip, Jeffrey P. Townsend, Matthew Scotch:
HCLS 2.0/3.0: Health care and life sciences data mashup using Web 2.0/3.0.
694-705
Electronic Edition (link) BibTeX
- François Belleau, Marc-Alexandre Nolin, Nicole Tourigny, Philippe Rigault, Jean Morissette:
Bio2RDF: Towards a mashup to build bioinformatics knowledge systems.
706-716
Electronic Edition (link) BibTeX
- Ranga Chandra Gudivada, Xiaoyan A. Qu, Jing Chen, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow:
Identifying disease-causal genes using Semantic Web-based representation of integrated genomic and phenomic knowledge.
717-729
Electronic Edition (link) BibTeX
- Sapna Bafna, Julian Humphries, Daniel P. Miranker:
Schema driven assignment and implementation of life science identifiers (LSIDs).
730-738
Electronic Edition (link) BibTeX
- Paolo Ciccarese, Elizabeth Wu, Gwen Wong, Marco Ocana, June Kinoshita, Alan Ruttenberg, Tim Clark:
The SWAN biomedical discourse ontology.
739-751
Electronic Edition (link) BibTeX
- Satya Sanket Sahoo, Olivier Bodenreider, Joni L. Rutter, Karen J. Skinner, Amit P. Sheth:
An ontology-driven semantic mashup of gene and biological pathway information: Application to the domain of nicotine dependence.
752-765
Electronic Edition (link) BibTeX
- Lynda Temal, Michel Dojat, Gilles Kassel, Bernard Gibaud:
Towards an ontology for sharing medical images and regions of interest in neuroimaging.
766-778
Electronic Edition (link) BibTeX
- Natalia Villanueva-Rosales, Michel Dumontier:
yOWL: An ontology-driven knowledge base for yeast biologists.
779-789
Electronic Edition (link) BibTeX
- Yuxin Mao, Zhaohui Wu, Wenya Tian, Xiaohong Jiang, William K. Cheung:
Dynamic sub-ontology evolution for traditional Chinese medicine web ontology.
790-805
Electronic Edition (link) BibTeX
- Menaka Rajapakse, Kanagasabai Rajaraman, Wee Tiong Ang, Anitha Veeramani, Mark J. Schreiber, Christopher J. O. Baker:
Ontology-centric integration and navigation of the dengue literature.
806-815
Electronic Edition (link) BibTeX
- Vít Novácek, Loredana Laera, Siegfried Handschuh, Brian Davis:
Infrastructure for dynamic knowledge integration - Automated biomedical ontology extension using textual resources.
816-828
Electronic Edition (link) BibTeX
- Jiangbo Dang, Amir Hedayati, Ken Hampel, Candemir Toklu:
An ontological knowledge framework for adaptive medical workflow.
829-836
Electronic Edition (link) BibTeX
- Michael DiBernardo, Rachel Pottinger, Mark Wilkinson:
Semi-automatic web service composition for the life sciences using the BioMoby semantic web framework.
837-847
Electronic Edition (link) BibTeX
- Francisco García Sánchez, Jesualdo Tomás Fernández-Breis, Rafael Valencia-García, Juan Miguel Gómez, Rodrigo Martínez-Béjar:
Combining Semantic Web technologies with Multi-Agent Systems for integrated access to biological resources.
848-859
Electronic Edition (link) BibTeX
Volume 41,
Number 6,
December 2008
- Kishore Mosaliganti, Tony Pan, Randall Ridgway, Richard Sharp, Lee Cooper, Alex Gulacy, Ashish Sharma, M. Okan Irfanoglu, Raghu Machiraju, Tahsin M. Kurç, Alain de Bruin, Pamela Wenzel, Gustavo Leone, Joel H. Saltz, Kun Huang:
An imaging workflow for characterizing phenotypical change in large histological mouse model datasets.
863-873
Electronic Edition (link) BibTeX
- Mehmet Korürek, Ali Nizam:
A new arrhythmia clustering technique based on Ant Colony Optimization.
874-881
Electronic Edition (link) BibTeX
- Hui Cao, Genevieve B. Melton, Marianthi Markatou, George Hripcsak:
Use abstracted patient-specific features to assist an information-theoretic measurement to assess similarity between medical cases.
882-888
Electronic Edition (link) BibTeX
- Erez Shalom, Yuval Shahar, Meirav Taieb-Maimon, Guy Bar, Avi Yarkoni, Ohad Young, Susana B. Martins, Laszlo T. Vaszar, Mary K. Goldstein, Yair Liel, Akiva Leibowitz, Tal Marom, Eitan Lunenfeld:
A quantitative assessment of a methodology for collaborative specification and evaluation of clinical guidelines.
889-903
Electronic Edition (link) BibTeX
- Barry Cohen, Marc Oren, Hua Min, Yehoshua Perl, Michael Halper:
Automated comparative auditing of NCIT genomic roles using NCBI.
904-913
Electronic Edition (link) BibTeX
- Emma Steele, Allan Tucker:
Consensus and Meta-analysis regulatory networks for combining multiple microarray gene expression datasets.
914-926
Electronic Edition (link) BibTeX
- Jonathan C. Silverstein, Nigel M. Parsad, Victor Tsirline:
Automatic perceptual color map generation for realistic volume visualization.
927-935
Electronic Edition (link) BibTeX
- Nenad S. Mitic, Gordana Pavlovic-Lazetic, Milos V. Beljanski:
Could n-gram analysis contribute to genomic island determination?
936-943
Electronic Edition (link) BibTeX
- Ray S. Lin, Susan D. Horn, John F. Hurdle, Alexander S. Goldfarb-Rumyantzev:
Single and multiple time-point prediction models in kidney transplant outcomes.
944-952
Electronic Edition (link) BibTeX
- Yao-Ting Huang, Kun-Mao Chao:
A new framework for the selection of tag SNPs by multimarker haplotypes.
953-961
Electronic Edition (link) BibTeX
- Adam Wright, Dean F. Sittig:
SANDS: A service-oriented architecture for clinical decision support in a National Health Information Network.
962-981
Electronic Edition (link) BibTeX
- Adam Wright, Dean F. Sittig:
A framework and model for evaluating clinical decision support architectures.
982-990
Electronic Edition (link) BibTeX
- Richard Moreau, V. Ochoa, Minh Tu Pham, Pierre Boulanger, Tanneguy Redarce, Olivier Dupuis:
A method to evaluate skill transfer and acquisition of obstetric gestures based on the curvatures analysis of the position and the orientation.
991-1000
Electronic Edition (link) BibTeX
- Eric S. Hall, Mollie R. Poynton, Scott P. Narus, Sidney N. Thornton:
Modeling the distribution of Nursing Effort using structured Labor and Delivery documentation.
1001-1008
Electronic Edition (link) BibTeX
- Brian C. Drolet, Kevin B. Johnson:
Categorizing the world of registries.
1009-1020
Electronic Edition (link) BibTeX
- Tai-Been Chen, Henry Horng-Shing Lu, Yun-Shien Lee, Hsiu-Jen Lan:
Segmentation of cDNA microarray images by kernel density estimation.
1021-1027
Electronic Edition (link) BibTeX
- Mor Peleg, Dizza Beimel, Dov Dori, Yaron Denekamp:
Situation-Based Access Control: Privacy management via modeling of patient data access scenarios.
1028-1040
Electronic Edition (link) BibTeX
- Christa E. Bartos, Douglas B. Fridsma, Brian S. Butler, Louis E. Penrod, Michael J. Becich, Rebecca S. Crowley:
Development of an instrument for measuring clinicians' power perceptions in the workplace.
1041-1049
Electronic Edition (link) BibTeX
- Murat Cokol, Raul Rodriguez-Esteban:
Visualizing evolution and impact of biomedical fields.
1050-1052
Electronic Edition (link) BibTeX
- Ismail Abbas, Joan Rovira, Josep Casanovas, Tony Greenfield:
Optimal design of clinical trials with computer simulation based on results of earlier trials, illustrated with a lipodystrophy trial in HIV patients.
1053-1061
Electronic Edition (link) BibTeX
- James E. Andrews, Timothy B. Patrick, Rachel L. Richesson, Hana Brown, Jeffrey P. Krischer:
Comparing heterogeneous SNOMED CT coding of clinical research concepts by examining normalized expressions.
1062-1069
Electronic Edition (link) BibTeX
- Trevor Cohen, Brett Blatter, Vimla L. Patel:
Simulating expert clinical comprehension: Adapting latent semantic analysis to accurately extract clinical concepts from psychiatric narrative.
1070-1087
Electronic Edition (link) BibTeX
- Guergana K. Savova, Anni Coden, Igor L. Sominsky, Rie Johnson, Philip V. Ogren, Piet C. de Groen, Christopher G. Chute:
Word sense disambiguation across two domains: Biomedical literature and clinical notes.
1088-1100
Electronic Edition (link) BibTeX
Copyright © Sun May 17 00:06:54 2009
by Michael Ley (ley@uni-trier.de)