Olivier Bodenreider

2009
36	EE	Olivier Bodenreider: Special Issue: Biomedical Ontology in Action. Applied Ontology 4(1): 1-4 (2009)
2008
35	EE	Olivier Bodenreider: Ontologies and Data Integration in Biomedicine: Success Stories and Challenging Issues. DILS 2008: 1-4
34	EE	Fleur Mougin, Anita Burgun, Olivier Bodenreider, Julie Chabalier, Olivier Loréal, Pierre Le Beux: Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System. DILS 2008: 61-76
33	EE	Olivier Bodenreider: Comparing SNOMED CT and the NCI Thesaurus through Semantic Web Technologies. KR-MED 2008
32	EE	Jeremy Rogers, Olivier Bodenreider: SNOMED CT: Browsing the Browsers. KR-MED 2008
31	EE	Michael Gruninger, Olivier Bodenreider, Frank Olken, Leo Obrst, Peter Yim: Ontology Summit 2007 - Ontology, taxonomy, folksonomy: Understanding the distinctions. Applied Ontology 3(3): 191-200 (2008)
30	EE	Olivier Bodenreider: Guest-editorial. Applied Ontology 3(4): 201-203 (2008)
29	EE	Satya Sanket Sahoo, Olivier Bodenreider, Joni L. Rutter, Karen J. Skinner, Amit P. Sheth: An ontology-driven semantic mashup of gene and biological pathway information: Application to the domain of nicotine dependence. Journal of Biomedical Informatics 41(5): 752-765 (2008)
2007
28	EE	Songmao Zhang, Olivier Bodenreider: Hybrid Alignment Strategy for Anatomical Ontologies: Results of the 2007 Ontology Alignment Contest. OM 2007
27	EE	Olivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun: Investigating subsumption in SNOMED CT: An exploration into large description logic-based biomedical terminologies. Artificial Intelligence in Medicine 39(3): 183-195 (2007)
26	EE	Songmao Zhang, Peter Mork, Olivier Bodenreider, Philip A. Bernstein: Comparing two approaches for aligning representations of anatomy. Artificial Intelligence in Medicine 39(3): 227-236 (2007)
25	EE	Songmao Zhang, Olivier Bodenreider: Experience in Aligning Anatomical Ontologies. Int. J. Semantic Web Inf. Syst. 3(2): 1-26 (2007)
2006
24		Olivier Bodenreider: KR-MED 2006, Formal Biomedical Knowledge Representation, Proceedings of the Second International Workshop on Formal Biomedical Knowledge Representation: "Biomedical Ontology in Action" (KR-MED 2006), Collocated with the 4th International Conference on Formal Ontology in Information Systems (FOIS-2006), Baltimore, Maryland, USA, November 8, 2006 CEUR-WS.org 2006
23	EE	Francisco Azuaje, Haiying Wang, Huiru Zheng, Olivier Bodenreider, Alban Chesneau: Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions. ICDM Workshops 2006: 114-119
22	EE	Songmao Zhang, Olivier Bodenreider: Aligning Multiple Anatomical Ontologies through a Reference. Ontology Matching 2006
21	EE	Songmao Zhang, Olivier Bodenreider: NLM Anatomical Ontology Alignment System. Results of the 2006 Ontology Alignment Contest. Ontology Matching 2006
20	EE	K. Bretonnel Cohen, Olivier Bodenreider, Lynette Hirschman: Session Introduction. Pacific Symposium on Biocomputing 2006: 1-3
19	EE	Robert Stevens, Olivier Bodenreider, Yves A. Lussier: Session Introduction. Pacific Symposium on Biocomputing 2006: 112-115
18	EE	Songmao Zhang, Olivier Bodenreider, Christine Golbreich: Experience in Reasoning with the Foundational Model of Anatomy in OWL DL. Pacific Symposium on Biocomputing 2006: 200-211
17	EE	Olivier Bodenreider, Robert Stevens: Bio-ontologies: current trends and future directions. Briefings in Bioinformatics 7(3): 256-274 (2006)
16	EE	Christine Golbreich, Songmao Zhang, Olivier Bodenreider: The foundational model of anatomy in OWL: Experience and perspectives. J. Web Sem. 4(3): 181-195 (2006)
2005
15	EE	Haiying Wang, Francisco Azuaje, Olivier Bodenreider: An Ontology-Driven Clustering Method for Supporting Gene Expression Analysis. CBMS 2005: 389-394
14	EE	Olivier Bodenreider, Marc Aubry, Anita Burgun: Non-Lexical Approaches to Identifying Associative Relations in the Gene Ontology. Pacific Symposium on Biocomputing 2005: 104-115
13	EE	M. N. Cantor, Indra Neil Sarkar, Olivier Bodenreider, Yves A. Lussier: GenesTrace: Phenomic Knowledge Discovery via Structured Terminology. Pacific Symposium on Biocomputing 2005: 116-127
12	EE	Olivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray: Session Introduction: Biomedical Ontologies. Pacific Symposium on Biocomputing 2005: 89-92
2004
11	EE	Francisco Azuaje, Olivier Bodenreider: Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study. BIBE 2004: 317-324
10	EE	Songmao Zhang, Peter Mork, Olivier Bodenreider: Lessons learned from aligning two representations of anatomy. KR-MED 2004: 102-108
9	EE	Olivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun: Investigating subsumption in DL-based terminologies: A Case Study in SNOMED CT . KR-MED 2004: 12-20
8	EE	Olivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray: Session Introduction. Pacific Symposium on Biocomputing 2004: 164-165
7	EE	Songmao Zhang, Olivier Bodenreider: Investigating Implicit Knowledge in Ontologies with Application to the Anatomical Domain. Pacific Symposium on Biocomputing 2004: 250-261
6		Olivier Bodenreider: The Unified Medical Language System (UMLS): integrating biomedical terminology. Nucleic Acids Research 32(Database-Issue): 267-270 (2004)
2003
5	EE	Olivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray: Biomedical Ontologies - Session Introduction. Pacific Symposium on Biocomputing 2003: 562-564
4	EE	Mehmet Kayaalp, Alan R. Aronson, Susanne M. Humphrey, Nicholas C. Ide, Lorraine K. Tanabe, Lawrence H. Smith, Dina Demner-Fushman, Russell R. Loane, James G. Mork, Olivier Bodenreider: Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics. TREC 2003: 441-450
3	EE	Olivier Bodenreider, Alexa T. McCray: Exploring semantic groups through visual approaches. Journal of Biomedical Informatics 36(6): 414-432 (2003)
2002
2		Olivier Bodenreider, Thomas C. Rindflesch, Anita Burgun: Unsupervised, corpus-based method for extending a biomedical terminology. ACL Workshop on Natural Language Processing in the Biomedical Domain 2002: 53-60
2001
1	EE	Anita Burgun, Olivier Bodenreider: Aspects of the taxonomic relation in the biomedical domain. FOIS 2001: 222-233

Coauthor Index

1	Alan R. Aronson	[4]
2	Marc Aubry	[14]
3	Francisco Azuaje	[11] [15] [23]
4	Philip A. Bernstein	[26]
5	Pierre Le Beux	[34]
6	Anita Burgun	[1] [2] [9] [14] [27] [34]
7	M. N. Cantor	[13]
8	Julie Chabalier	[34]
9	Alban Chesneau	[23]
10	K. Bretonnel Cohen	[20]
11	Dina Demner-Fushman	[4]
12	Christine Golbreich	[16] [18]
13	Michael Gruninger	[31]
14	Lynette Hirschman	[20]
15	Susanne M. Humphrey	[4]
16	Nicholas C. Ide	[4]
17	Mehmet Kayaalp	[4]
18	Anand Kumar	[9] [27]
19	Russell R. Loane	[4]
20	Olivier Loréal	[34]
21	Yves A. Lussier	[13] [19]
22	Alexa T. McCray	[3] [5] [8] [12]
23	Joyce A. Mitchell	[5] [8] [12]
24	James G. Mork	[4]
25	Peter Mork	[10] [26]
26	Fleur Mougin	[34]
27	Leo Obrst	[31]
28	Frank Olken	[31]
29	Thomas C. Rindflesch	[2]
30	Jeremy Rogers	[32]
31	Joni L. Rutter	[29]
32	Satya Sanket Sahoo	[29]
33	Indra Neil Sarkar	[13]
34	Amit P. Sheth	[29]
35	Karen J. Skinner	[29]
36	Barry Smith	[9] [27]
37	Lawrence H. Smith	[4]
38	Robert Stevens (Robert D. Stevens)	[17] [19]
39	Lorraine K. Tanabe	[4]
40	Haiying Wang	[15] [23]
41	Peter Yim	[31]
42	Songmao Zhang	[7] [10] [16] [18] [21] [22] [25] [26] [28]
43	Huiru Zheng	[23]

Colors in the list of coauthors