Fengzhu Sun

2008
26	EE	Utz J. Pape, Sven Rahmann, Fengzhu Sun, Martin Vingron: Compound Poisson Approximation of the Number of Occurrences of a Position Frequency Matrix (PFM) on Both Strands. Journal of Computational Biology 15(6): 547-564 (2008)
2007
25	EE	Xiaotu Ma, Hyunju Lee, Li Wang, Fengzhu Sun: CGI: a new approach for prioritizing genes by combining gene expression and protein-protein interaction data. Bioinformatics 23(2): 215-221 (2007)
2006
24	EE	Zhidong Tu, Li Wang, Michelle N. Arbeitman, Ting Chen, Fengzhu Sun: An integrative approach for causal gene identification and gene regulatory pathway inference. ISMB (Supplement of Bioinformatics) 2006: 489-496
23	EE	Quansong Ruan, Joshua A. Steele, Michael S. Schwalbach, Jed A. Fuhrman, Fengzhu Sun: A dynamic programming algorithm for binning microbial community profiles. Bioinformatics 22(12): 1508-1514 (2006)
22	EE	Quansong Ruan, Debojyoti Dutta, Michael S. Schwalbach, Joshua A. Steele, Jed A. Fuhrman, Fengzhu Sun: Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors. Bioinformatics 22(20): 2532-2538 (2006)
21	EE	Chao Cheng, Xiaotu Ma, Xiting Yan, Fengzhu Sun, Lei M. Li: MARD: a new method to detect differential gene expression in treatment-control time courses. Bioinformatics 22(21): 2650-2657 (2006)
2005
20	EE	Kui Zhang, Zhaohui S. Qin, Ting Chen, Jun S. Liu, Michael S. Waterman, Fengzhu Sun: HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms. Bioinformatics 21(1): 131-134 (2005)
19	EE	Kui Zhang, Fengzhu Sun, Hongyu Zhao: HAPLORE: a program for haplotype reconstruction in general pedigrees without recombination. Bioinformatics 21(1): 90-103 (2005)
2004
18	EE	Sung K. Kim, Kui Zhang, Fengzhu Sun: A Comparison of Different Strategies for Computing Confidence Intervals of the Linkage Disequilibrium Measure. Pacific Symposium on Biocomputing 2004: 128-139
17	EE	Minghua Deng, Zhidong Tu, Fengzhu Sun, Ting Chen: Mapping gene ontology to proteins based on protein-protein interaction data. Bioinformatics 20(6): 895-902 (2004)
16	EE	Wentian Li, Fengzhu Sun, Ivo Grosse: Extreme Value Distribution Based Gene Selection Criteria for Discriminant Microarray Data Analysis Using Logistic Regression. Journal of Computational Biology 11(2/3): 215-226 (2004)
15	EE	Minghua Deng, Ting Chen, Fengzhu Sun: An Integrated Probabilistic Model for Functional Prediction of Proteins. Journal of Computational Biology 11(2/3): 463-475 (2004)
2003
14	EE	Minghua Deng, Fengzhu Sun, Ting Chen: Assessment of the reliability of protein-protein interactions and protein function prediction. Pacific Symposium on Biocomputing 2003: 140-151
13	EE	Kui Zhang, Fengzhu Sun, Michael S. Waterman, Ting Chen: Dynamic programming algorithms for haplotype block partitioning: applications to human chromosome 21 haplotype data. RECOMB 2003: 332-340
12	EE	Minghua Deng, Ting Chen, Fengzhu Sun: An integrated probabilistic model for functional prediction of proteins. RECOMB 2003: 95-103
11		Yinglei Lai, Deepali Shinde, Norman Arnheim, Fengzhu Sun: The Mutation Process of Microsatellites During the Polymerase Chain Reaction. Journal of Computational Biology 10(2): 143-156 (2003)
10	EE	Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen, Fengzhu Sun: Prediction of Protein Function Using Protein-Protein Interaction Data. Journal of Computational Biology 10(6): 947-960 (2003)
2002
9	EE	Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen, Fengzhu Sun: Prediction of Protein Function Using Protein-Protein Interaction Data. CSB 2002: 197-206
8	EE	Kui Zhang, Ting Chen, Michael S. Waterman, Zhaohui S. Qin, Jun S. Liu, Fengzhu Sun: Dynamic Programming Algorithms for Haplotype Block Partitioning and Tag SNP Selection Using Haplotype Data or Genotype Data. Computational Methods for SNPs and Haplotype Inference 2002: 96-112
7	EE	Minghua Deng, Shipra Mehta, Fengzhu Sun, Ting Chen: Inferring domain-domain interactions from protein-protein interactions. RECOMB 2002: 117-126
2000
6		Dai Wang, Cheng Zhao, Rong Cheng, Fengzhu Sun: Estimation of the Mutation Rate During Error-prone Polymerase Chain Reaction. Journal of Computational Biology 7(1-2): 143-158 (2000)
1999
5		Fengzhu Sun: Modeling DNA Shuffling. Journal of Computational Biology 6(1): 77-90 (1999)
1998
4	EE	Fengzhu Sun: Modeling DNA shuffling. RECOMB 1998: 251-257
1997
3	EE	Fengzhu Sun, Gary Benson, Norman Arnheim, Michael S. Waterman: Pooling strategies for establishing physical genome maps using FISH. RECOMB 1997: 294-299
2		Fengzhu Sun, Gary Benson, Norman Arnheim, Michael S. Waterman: Pooling Strategies for Establishing Physical Genome Maps Using FISH. Journal of Computational Biology 4(4): 467-486 (1997)
1995
1		Fengzhu Sun: The Polymerase Chain Reaction and Branching Processes. Journal of Computational Biology 2(1): 63-86 (1995)

Coauthor Index

1	Michelle N. Arbeitman	[24]
2	Norman Arnheim	[2] [3] [11]
3	Gary Benson	[2] [3]
4	Ting Chen	[7] [8] [9] [10] [12] [13] [14] [15] [17] [20] [24]
5	Chao Cheng	[21]
6	Rong Cheng	[6]
7	Minghua Deng	[7] [9] [10] [12] [14] [15] [17]
8	Debojyoti Dutta	[22]
9	Jed A. Fuhrman	[22] [23]
10	Ivo Grosse	[16]
11	Sung K. Kim	[18]
12	Yinglei Lai	[11]
13	Hyunju Lee	[25]
14	Lei M. Li	[21]
15	Wentian Li	[16]
16	Jun S. Liu	[8] [20]
17	Xiaotu Ma	[21] [25]
18	Shipra Mehta	[7] [9] [10]
19	Utz J. Pape	[26]
20	Zhaohui S. Qin	[8] [20]
21	Sven Rahmann	[26]
22	Quansong Ruan	[22] [23]
23	Michael S. Schwalbach	[22] [23]
24	Deepali Shinde	[11]
25	Joshua A. Steele	[22] [23]
26	Zhidong Tu	[17] [24]
27	Martin Vingron	[26]
28	Dai Wang	[6]
29	Li Wang	[24] [25]
30	Michael S. Waterman	[2] [3] [8] [13] [20]
31	Xiting Yan	[21]
32	Kui Zhang	[8] [9] [10] [13] [18] [19] [20]
33	Cheng Zhao	[6]
34	Hongyu Zhao	[19]

Colors in the list of coauthors