Steven Salzberg

2007
48	EE	Lynn M. Schriml, Aaron Gussman, Kathy Phillippy, Sam Angiuoli, Kumar Hari, Alan Goates, Ravi Jain, Tanja Davidsen, Anurhada Ganapathy, Elodie Ghedin, Steven Salzberg, Owen White, Neil Hall: Gemina: A Web-Based Epidemiology and Genomic Metadata System Designed to Identify Infectious Agents. BioSurveillance 2007: 228-229
47	EE	Mihaela Pertea, Steven Salzberg: Using Protein Domains to Improve the Accuracy of Ab Initio Gene Finding. WABI 2007: 208-215
46	EE	Arthur L. Delcher, Kirsten A. Bratke, Edwin C. Powers, Steven Salzberg: Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23(6): 673-679 (2007)
2006
45	EE	John Quackenbush, Steven Salzberg: It is time to end the patenting of software. Bioinformatics 22(12): 1416-1417 (2006)
2005
44	EE	William H. Majoros, Mihaela Pertea, Arthur L. Delcher, Steven Salzberg: Efficient decoding algorithms for generalized hidden Markov model gene finders. BMC Bioinformatics 6: 16 (2005)
43	EE	William H. Majoros, Steven Salzberg: An empirical analysis of training protocols for probabilistic gene finders. BMC Bioinformatics 6: 193 (2005)
42	EE	Jonathan E. Allen, Steven Salzberg: JIGSAW: integration of multiple sources of evidence for gene prediction. Bioinformatics 21(18): 3596-3603 (2005)
41	EE	Steven Salzberg, James A. Yorke: Beware of mis-assembled genomes. Bioinformatics 21(24): 4320-4321 (2005)
2004
40	EE	William H. Majoros, Steven Salzberg: An empirical analysis of training protocols for probabilistic gene finders. BMC Bioinformatics 5: 206 (2004)
39	EE	William H. Majoros, Mihaela Pertea, Steven Salzberg: TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders. Bioinformatics 20(16): 2878-2879 (2004)
38	EE	Brian J. Haas, Arthur L. Delcher, Jennifer R. Wortman, Steven Salzberg: DAGchainer: a tool for mining segmental genome duplications and synteny. Bioinformatics 20(18): 3643-3646 (2004)
37		Mihai Pop, Adam Phillippy, Arthur L. Delcher, Steven Salzberg: Comparative genome assembly. Briefings in Bioinformatics 5(3): 237-248 (2004)
2003
36	EE	Steven Salzberg: Genome Paleontology: Discoveries from Complete Genomes. BIOKDD 2003: 1
35		William H. Majoros, Mihaela Pertea, Corina Antonescu, Steven Salzberg: GlimmerM, Exonomy and Unveil: three ab initio eukaryotic genefinders. Nucleic Acids Research 31(13): 3601-3604 (2003)
2002
34	EE	Mihaela Pertea, Steven Salzberg: A Method to Improve the Performance of Translation Start Site Detection and Its Application for Gene Finding. WABI 2002: 210-219
33	EE	Mihai Pop, Steven Salzberg, Martin Shumway: Genome Sequence Assembly: Algorithms and Issues. IEEE Computer 35(7): 47-54 (2002)
2001
32		Baris E. Suzek, Maria D. Ermolaeva, Mark Schreiber, Steven Salzberg: A probabilistic method for identifying start codons in bacterial genomes. Bioinformatics 17(12): 1123-1130 (2001)
1998
31	EE	Simon Kasif, Steven Salzberg, David L. Waltz, John Rachlin, David W. Aha: A Probabilistic Framework for Memory-Based Reasoning. Artif. Intell. 104(1-2): 287-311 (1998)
30		Steven Salzberg, Arthur L. Delcher, Kenneth H. Fasman, John Henderson: A Decision Tree System for Finding Genes in DNA. Journal of Computational Biology 5(4): 667-680 (1998)
1997
29		John W. Sheppard, Steven Salzberg: A Teaching Strategy for Memory-Based Control. Artif. Intell. Rev. 11(1-5): 343-370 (1997)
28		Esther M. Arkin, Patrice Belleville, Joseph S. B. Mitchell, David M. Mount, Kathleen Romanik, Steven Salzberg, Diane L. Souvaine: Testing Simple Polygons. Comput. Geom. 8: 97-114 (1997)
27		Steven Salzberg: A method for identifying splice sites and translational start sites in eukaryotic mRNA. Computer Applications in the Biosciences 13(4): 365-376 (1997)
26		Steven Salzberg: On Comparing Classifiers: Pitfalls to Avoid and a Recommended Approach. Data Min. Knowl. Discov. 1(3): 317-328 (1997)
25		John Henderson, Steven Salzberg, Kenneth H. Fasman: Finding Genes in DNA with a Hidden Markov Model. Journal of Computational Biology 4(2): 127-142 (1997)
1996
24		Steven Salzberg, Xin Chen, John Henderson, Kenneth H. Fasman: Finding Genes in DNA Using Decision Trees and Dynamic Programming. ISMB 1996: 201-210
23		Truxton Fulton, Simon Kasif, Steven Salzberg, David L. Waltz: Local Induction of Decision Trees: Towards Interactive Data Mining. KDD 1996: 14-19
22		David G. Heath, Simon Kasif, S. Rao Kosaraju, Steven Salzberg, Gregory F. Sullivan: Learning nested concept classes with limited storage. J. Exp. Theor. Artif. Intell. 8(2): 129-147 (1996)
1995
21		John W. Sheppard, Steven Salzberg: Combining Genetic Algorithms with Memory Based Reasoning. ICGA 1995: 452-459
20		Truxton Fulton, Simon Kasif, Steven Salzberg: Efficient Algorithms for Finding Multi-way Splits for Decision Trees. ICML 1995: 244-251
19		Sreerama K. Murthy, Steven Salzberg: Lookahead and Pathology in Decision Tree Induction. IJCAI 1995: 1025-1033
18		Sreerama K. Murthy, Steven Salzberg: Decision Tree Induction: How Effective is the Greedy Heuristic? KDD 1995: 222-227
17		Kathleen Romanik, Steven Salzberg: Testing Orthogonal Shapes. Comput. Geom. 5: 33-49 (1995)
16	EE	Steven Salzberg, Arthur L. Delcher, David G. Heath, Simon Kasif: Best-Case Results for Nearest-Neighbor Learning. IEEE Trans. Pattern Anal. Mach. Intell. 17(6): 599-608 (1995)
15		Steven Salzberg: Locating Protein Coding Regions in Human DNA Using a Decision Tree Algorithm. Journal of Computational Biology 2(3): 473-485 (1995)
1994
14		John Rachlin, Simon Kasif, Steven Salzberg, David W. Aha: Towards a Better Understanding of Memory-based Reasoning Systems. ICML 1994: 242-250
13		Sreerama K. Murthy, Simon Kasif, Steven Salzberg: A System for Induction of Oblique Decision Trees. J. Artif. Intell. Res. (JAIR) 2: 1-32 (1994)
12		Steven Salzberg: Book Review: C4.5: Programs for Machine Learning by J. Ross Quinlan. Morgan Kaufmann Publishers, Inc., 1993. Machine Learning 16(3): 235-240 (1994)
1993
11		Sreerama K. Murthy, Simon Kasif, Steven Salzberg, Richard Beigel: OC1: A Randomized Induction of Oblique Decision Trees. AAAI 1993: 322-327
10		Esther M. Arkin, Patrice Belleville, Joseph S. B. Mitchell, David M. Mount, Kathleen Romanik, Steven Salzberg, Diane L. Souvaine: Testing Simple Polygons. CCCG 1993: 387
9		David G. Heath, Simon Kasif, Steven Salzberg: Induction of Oblique Decision Trees. IJCAI 1993: 1002-1007
8		R. Scott Cost, Steven Salzberg: A Weighted Nearest Neighbor Algorithm for Learning with Symbolic Features. Machine Learning 10: 57-78 (1993)
1991
7		Steven Salzberg, Arthur L. Delcher, David G. Heath, Simon Kasif: Learning with a Helpful Teacher. IJCAI 1991: 705-711
6		David G. Heath, Simon Kasif, S. Rao Kosaraju, Steven Salzberg, Gregory F. Sullivan: Learning Nested Concept Classes with Limited Storage. IJCAI 1991: 777-782
5		Steven Salzberg: Distance Metrics for Instance-Bsed Learning. ISMIS 1991: 399-408
4		Steven Salzberg: A Nearest Hyperrectangle Learning Method. Machine Learning 6: 251-276 (1991)
1989
3		Steven Salzberg: Nested Hyper-Rectangles for Exemplar-Based Learning. AII 1989: 184-201
1985
2		Steven Salzberg: Heuristics for Inductive Learning. IJCAI 1985: 603-609
1983
1		Steven Salzberg: Generating Hypotheses to Explain Prediction Failures. AAAI 1983: 352-355

Coauthor Index

1	David W. Aha	[14] [31]
2	Jonathan E. Allen	[42]
3	Sam Angiuoli	[48]
4	Corina Antonescu	[35]
5	Esther M. Arkin	[10] [28]
6	Richard Beigel	[11]
7	Patrice Belleville	[10] [28]
8	Kirsten A. Bratke	[46]
9	Xin Chen	[24]
10	R. Scott Cost	[8]
11	Tanja Davidsen	[48]
12	Arthur L. Delcher	[7] [16] [30] [37] [38] [44] [46]
13	Maria D. Ermolaeva	[32]
14	Kenneth H. Fasman	[24] [25] [30]
15	Truxton Fulton	[20] [23]
16	Anurhada Ganapathy	[48]
17	Elodie Ghedin	[48]
18	Alan Goates	[48]
19	Aaron Gussman	[48]
20	Brian J. Haas	[38]
21	Neil Hall	[48]
22	Kumar Hari	[48]
23	David G. Heath	[6] [7] [9] [16] [22]
24	John Henderson	[24] [25] [30]
25	Ravi Jain	[48]
26	Simon Kasif	[6] [7] [9] [11] [13] [14] [16] [20] [22] [23] [31]
27	S. Rao Kosaraju	[6] [22]
28	William H. Majoros	[35] [39] [40] [43] [44]
29	Joseph S. B. Mitchell	[10] [28]
30	David M. Mount	[10] [28]
31	Sreerama K. Murthy	[11] [13] [18] [19]
32	Mihaela Pertea	[34] [35] [39] [44] [47]
33	Adam Phillippy	[37]
34	Kathy Phillippy	[48]
35	Mihai Pop	[33] [37]
36	Edwin C. Powers	[46]
37	John Quackenbush	[45]
38	John Rachlin	[14] [31]
39	Kathleen Romanik	[10] [17] [28]
40	Mark Schreiber	[32]
41	Lynn M. Schriml	[48]
42	John W. Sheppard	[21] [29]
43	Martin Shumway	[33]
44	Diane L. Souvaine	[10] [28]
45	Gregory F. Sullivan	[6] [22]
46	Baris E. Suzek	[32]
47	David L. Waltz	[23] [31]
48	Owen White	[48]
49	Jennifer R. Wortman	[38]
50	James A. Yorke	[41]

Colors in the list of coauthors