2008 | ||
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34 | EE | Hideaki Sugawara, Osamu Ogasawara, Kousaku Okubo, Takashi Gojobori, Yoshio Tateno: DDBJ with new system and face. Nucleic Acids Research 36(Database-Issue): 22-24 (2008) |
33 | EE | Akihiro Matsuya, Ryuichi Sakate, Yoshihiro Kawahara, Kanako O. Koyanagi, Yoshiharu Sato, Yasuyuki Fujii, Chisato Yamasaki, Takuya Habara, Hajime Nakaoka, Fusano Todokoro, Kaori Yamaguchi, Toshinori Endo, Satoshi Ota, Wojciech Makalowski, Kazuho Ikeo, Yoshiyuki Suzuki, Kousuke Hanada, Katsuyuki Hashimoto, Momoki Hirai, Hisakazu Iwama, Naruya Saitou, Aiko T. Hiraki, Lihua Jin, Yayoi Kaneko, Masako Kanno, Katsuhiko Murakami, Akiko Ogura Noda, Naomi Saichi, Ryoko Sanbonmatsu, Mami Suzuki, Jun-ichi Takeda, Masayuki Tanaka, Takashi Gojobori, Tadashi Imanishi, Takeshi Itoh: Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees. Nucleic Acids Research 36(Database-Issue): 787-792 (2008) |
2007 | ||
32 | EE | Jun-ichi Takeda, Yutaka Suzuki, Mitsuteru Nakao, Tsuyoshi Kuroda, Sumio Sugano, Takashi Gojobori, Tadashi Imanishi: H-DBAS: Alternative splicing database of completely sequenced and manually annotated full-length cDNAs based on H-Invitational. Nucleic Acids Research 35(Database-Issue): 104-109 (2007) |
31 | EE | Hideaki Sugawara, Takashi Abe, Takashi Gojobori, Yoshio Tateno: DDBJ working on evaluation and classification of bacterial genes in INSDC. Nucleic Acids Research 35(Database-Issue): 13-15 (2007) |
2006 | ||
30 | EE | Kousaku Okubo, Hideaki Sugawara, Takashi Gojobori, Yoshio Tateno: DDBJ in preparation for overview of research activities behind data submissions. Nucleic Acids Research 34(Database-Issue): 6-9 (2006) |
29 | EE | Hajime Ohyanagi, Tsuyoshi Tanaka, Hiroaki Sakai, Yasumasa Shigemoto, Kaori Yamaguchi, Takuya Habara, Yasuyuki Fujii, Baltazar A. Antonio, Yoshiaki Nagamura, Tadashi Imanishi, Kazuho Ikeo, Takeshi Itoh, Takashi Gojobori, Takuji Sasaki: The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information. Nucleic Acids Research 34(Database-Issue): 741-744 (2006) |
28 | EE | Chisato Yamasaki, Hiroaki Kawashima, Fusano Todokoro, Yasuhiro Imamizu, Makoto Ogawa, Motohiko Tanino, Takeshi Itoh, Takashi Gojobori, Tadashi Imanishi: TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDB. Nucleic Acids Research 34(Web-Server-Issue): 345-349 (2006) |
2005 | ||
27 | EE | Yoshio Tateno, Naruya Saitou, Kousaku Okubo, Hideaki Sugawara, Takashi Gojobori: DDBJ in collaboration with mass-sequencing teams on annotation. Nucleic Acids Research 33(Database-Issue): 25-28 (2005) |
26 | EE | Motohiko Tanino, Marie-Anne Debily, Takuro Tamura, Teruyoshi Hishiki, Osamu Ogasawara, Katsuji Murakawa, Shoko Kawamoto, Kouichi Itoh, Shinya Watanabe, Sandro José de Souza, Sandrine Imbeaud, Esther Graudens, Eric Eveno, Phillip Hilton, Yukio Sudo, Janet Kelso, Kazuho Ikeo, Tadashi Imanishi, Takashi Gojobori, Charles Auffray, Winston Hide, Kousaku Okubo: The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms. Nucleic Acids Research 33(Database-Issue): 567-572 (2005) |
2004 | ||
25 | Satoru Miyazaki, Hideaki Sugawara, Kazuho Ikeo, Takashi Gojobori, Yoshio Tateno: DBJ in the stream of various biological data. Nucleic Acids Research 32(Database-Issue): 31-34 (2004) | |
2003 | ||
24 | Satoru Miyazaki, Hideaki Sugawara, Takashi Gojobori, Yoshio Tateno: DNA Data Bank of Japan (DDBJ) in XML. Nucleic Acids Research 31(1): 13-16 (2003) | |
2002 | ||
23 | Yoshio Tateno, Tadashi Imanishi, Satoru Miyazaki, Kaoru Fukami-Kobayashi, Naruya Saitou, Hideaki Sugawara, Takashi Gojobori: DNA Data Bank of Japan (DDBJ) for genome scale research in life science. Nucleic Acids Research 30(1): 27-30 (2002) | |
2001 | ||
22 | Yoshiyuki Suzuki, Takashi Gojobori, Masatoshi Nei: ADAPTSITE: detecting natural selection at single amino acid sites. Bioinformatics 17(7): 660-661 (2001) | |
2000 | ||
21 | EE | Takashi Gojobori, T. Daniel Andrews, Takeshi Itoh: Evolutionary features of genomes as disclosed by comparative analysis of complete genome sequences (abstract only). RECOMB 2000: 137 |
20 | Yoshio Tateno, Satoru Miyazaki, Motonori Ota, Hideaki Sugawara, Takashi Gojobori: DNA Data Bank of Japan (DDBJ) in collaboration with mass sequencing teams. Nucleic Acids Research 28(1): 24-26 (2000) | |
19 | Yasukazu Nakamura, Takashi Gojobori, Toshimichi Ikemura: Codon usage tabulated from international DNA sequence databases: status for the year 2000. Nucleic Acids Research 28(1): 292 (2000) | |
1999 | ||
18 | EE | Hiroshi Tanaka, Fengrong Ren, Toshitsugu Okayama, Takashi Gojobori: Topology Selection in Unrooted Molecular Phylogenetic Tree By Minimum Model-Based Complexity Method. Pacific Symposium on Biocomputing 1999: 326-337 |
17 | Hideaki Sugawara, Satoru Miyazaki, Takashi Gojobori, Yoshio Tateno: DNA Data Bank of Japan dealing with large-scale data submission. Nucleic Acids Research 27(1): 25-28 (1999) | |
16 | Yasukazu Nakamura, Takashi Gojobori, Toshimichi Ikemura: Codon usage tabulated from the international DNA sequence databases; its status 1999. Nucleic Acids Research 27(1): 292 (1999) | |
1998 | ||
15 | Toshitsugu Okayama, Takuro Tamura, Takashi Gojobori, Yoshio Tateno, Kazuho Ikeo, Satoru Miyazaki, Kaoru Fukami-Kobayashi, Hideaki Sugawara: Formal design and implementation of an improved DDBJ DNA database with a new schema and object-oriented library. Bioinformatics 14(6): 472-478 (1998) | |
14 | Yoshio Tateno, Kaoru Fukami-Kobayashi, Satoru Miyazaki, Hideaki Sugawara, Takashi Gojobori: DNA Data Bank of Japan at work on genome sequence data. Nucleic Acids Research 26(1): 16-20 (1998) | |
13 | Yasukazu Nakamura, Takashi Gojobori, Toshimichi Ikemura: Codon usage tabulated from the international DNA sequence databases. Nucleic Acids Research 26(1): 334 (1998) | |
12 | Guy Perrière, Manolo Gouy, Takashi Gojobori: The non-redundant Bacillus subtilis (NRSub) database: update 1998. Nucleic Acids Research 26(1): 60-62 (1998) | |
1997 | ||
11 | Fengrong Ren, Hiroshi Tanaka, Toshitsugu Okayama, Takashi Gojobori: Molecular Phylogenetic Trees are Inferred by Using Minimum Model-Based Complexity. BCEC 1997: 122-131 | |
10 | Hiroshi Tanaka, Fengrong Ren, Toshitsugu Okayama, Takashi Gojobori: Inference of Molecular Phylogenetic Tree Based on Minimum Model-Based Complexity Method. ISMB 1997: 319-328 | |
9 | Yoshio Tateno, Takashi Gojobori: DNA Data Bank of Japan in the age of information biology. Nucleic Acids Research 25(1): 14-17 (1997) | |
8 | Yasukazu Nakamura, Takashi Gojobori, Toshimichi Ikemura: Codon usage tabulated from the international DNA sequence databases. Nucleic Acids Research 25(1): 244-245 (1997) | |
7 | Guy Perrière, Ivan Moszer, Takashi Gojobori: The NRSub database: update 1997. Nucleic Acids Research 25(1): 53-56 (1997) | |
1996 | ||
6 | Hajime Kitakami, Yasuma Mori, Yoshio Tateno, Takashi Gojobori: A Biological Taxonomy Database System an World-Wide Web. German Conference on Bioinformatics 1996: 244-246 | |
5 | Yasukazu Nakamura, Ken-nosuke Wada, Yoshiko Wada, Hirofumi Doi, Shigehiko Kanaya, Takashi Gojobori, Toshimichi Ikemura: Condon usage tabulated from the international DNA sequence databases. Nucleic Acids Research 24(1): 214-215 (1996) | |
4 | Guy Perrière, Ivan Moszer, Takashi Gojobori: NRSub: a non-redundant database for Bacillus subtilis. Nucleic Acids Research 24(1): 41-45 (1996) | |
1995 | ||
3 | EE | Fengrong Ren, Hiroshi Tanaka, Noria Fukuda, Takashi Gojobori: Molecular evolutionary phylogenetic trees based on minimum description length principle. HICSS (5) 1995: 165-173 |
2 | EE | Hajime Kitakami, Tadasu Shin-I, Kazuho Ikeo, Yoshihiro Ugawa, Naruya Saitou, Takashi Gojobori, Yoshio Tateno: YAMATO and ASUKA: DNA database management system. HICSS (5) 1995: 72-80 |
1994 | ||
1 | Hajime Kitakami, Yoshio Tateno, Takashi Gojobori: Toward Unification of Taxonomy Databases in a Distributed Environment. ISMB 1994: 227-235 |