2009 |
21 | EE | Tara Gibson,
Karen Schuchardt,
Eric G. Stephan:
Application of Named Graphs Towards Custom Provenance Views.
Workshop on the Theory and Practice of Provenance 2009 |
2008 |
20 | EE | Tara Gibson,
Karen Schuchardt,
Eric G. Stephan:
Application of Provenance for Automated and Research Driven Workflows.
IPAW 2008: 128-135 |
19 | EE | Luc Moreau,
Bertram Ludäscher,
Ilkay Altintas,
Roger S. Barga,
Shawn Bowers,
Steven P. Callahan,
George Chin Jr.,
Ben Clifford,
Shirley Cohen,
Sarah Cohen Boulakia,
Susan B. Davidson,
Ewa Deelman,
Luciano A. Digiampietri,
Ian T. Foster,
Juliana Freire,
James Frew,
Joe Futrelle,
Tara Gibson,
Yolanda Gil,
Carole A. Goble,
Jennifer Golbeck,
Paul T. Groth,
David A. Holland,
Sheng Jiang,
Jihie Kim,
David Koop,
Ales Krenek,
Timothy M. McPhillips,
Gaurang Mehta,
Simon Miles,
Dominic Metzger,
Steve Munroe,
Jim Myers,
Beth Plale,
Norbert Podhorszki,
Varun Ratnakar,
Emanuele Santos,
Carlos Eduardo Scheidegger,
Karen Schuchardt,
Margo I. Seltzer,
Yogesh L. Simmhan,
Cláudio T. Silva,
Peter Slaughter,
Eric G. Stephan,
Robert Stevens,
Daniele Turi,
Huy T. Vo,
Michael Wilde,
Jun Zhao,
Yong Zhao:
Special Issue: The First Provenance Challenge.
Concurrency and Computation: Practice and Experience 20(5): 409-418 (2008) |
18 | EE | Karen Schuchardt,
Tara Gibson,
Eric G. Stephan,
George Chin Jr.:
Applying content management to automated provenance capture.
Concurrency and Computation: Practice and Experience 20(5): 541-554 (2008) |
2007 |
17 | EE | Anuj R. Shah,
Mudita Singhal,
Kyle R. Klicker,
Eric G. Stephan,
H. Steven Wiley,
Katrina M. Waters:
Enabling high-throughput data management for systems biology: The Bioinformatics Resource Manager.
Bioinformatics 23(7): 906-909 (2007) |
2006 |
16 | EE | Tara D. Talbott,
Karen Schuchardt,
Eric G. Stephan,
James D. Myers:
Mapping Physical Formats to Logical Models to Extract Data and Metadata: The Defuddle Parsing Engine.
IPAW 2006: 73-81 |
15 | EE | George Chin Jr.,
Eric G. Stephan,
Debbie K. Gracio,
Olga A. Kuchar,
Paul D. Whitney,
Karen Schuchardt:
Developing Concept-Based User Interfaces for Scientific Computing.
IEEE Computer 39(9): 26-34 (2006) |
2005 |
14 | EE | Eric G. Stephan,
Kyle R. Klicker,
Mudita Singhal,
Heidi J. Sofia:
Problem Solving Environment Approach to Integrating Diverse Biological Data Sources.
CSB Workshops 2005: 47-50 |
13 | EE | Mudita Singhal,
Kyle R. Klicker,
George Chin Jr.,
Lynn Trease,
Eric G. Stephan,
Deborah K. Gracio:
Bioinformatics Approach for Exploring MS/MS Proteomics Data.
HICSS 2005 |
12 | EE | James D. Myers,
Thomas C. Allison,
Sandra Bittner,
Brett T. Didier,
Michael Frenklach,
William H. Green Jr.,
Yen-Ling Ho,
John C. Hewson,
Wendy S. Koegler,
Carina Lansing,
David Leahy,
Michael Lee,
Renata McCoy,
Michael Minkoff,
Sandeep Nijsure,
Gregor von Laszewski,
David Montoya,
Luwi Oluwole,
Carmen M. Pancerella,
Reinhardt Pinzon,
William Pitz,
Larry A. Rahn,
Branko Ruscic,
Karen Schuchardt,
Eric G. Stephan,
Al Wagner,
Theresa L. Windus,
Christine L. Yang:
A Collaborative Informatics Infrastructure for Multi-Scale Science.
Cluster Computing 8(4): 243-253 (2005) |
2004 |
11 | EE | James D. Myers,
Thomas C. Allison,
Sandra Bittner,
Brett T. Didier,
Michael Frenklach,
William H. Green Jr.,
Yen-Ling Ho,
John C. Hewson,
Wendy S. Koegler,
Carina Lansing,
David Leahy,
Michael Lee,
Renata McCoy,
Michael Minkoff,
Sandeep Nijsure,
Gregor von Laszewski,
David Montoya,
Carmen M. Pancerella,
Reinhardt Pinzon,
William Pitz,
Larry A. Rahn,
Branko Ruscic,
Karen Schuchardt,
Eric G. Stephan,
Al Wagner,
Theresa L. Windus,
Christine L. Yang:
A Collaborative Informatics Infrastructure for Multi-scale Science.
CLADE 2004: 24 |
10 | EE | Heidi J. Sofia,
Abigail L. Corrigan,
Kyle R. Klicker,
George Chin Jr.,
Eric G. Stephan:
Exploring Genomic Context Patterns for Rhodobacter Sphaeroides in the HERBE Knowledge Discovery Environment.
CSB 2004: 462-463 |
9 | EE | Mudita Singhal,
Eric G. Stephan,
Kyle R. Klicker,
Lynn Trease,
George Chin Jr.,
Deborah K. Gracio,
Deborah A. Payne:
Enabling Systems Biology: A Scientific Problem-Solving Environment.
International Conference on Computational Science 2004: 540-547 |
8 | | Eric G. Stephan,
George Chin Jr.,
Abigail L. Corrigan,
Kyle R. Klicker,
Heidi J. Sofia:
Synchronized Biological Knowledge and Data Management: A Hybrid Approach.
METMBS 2004: 105-112 |
7 | | Susan Havre,
Mudita Singhal,
Banu Gopalan,
Deborah A. Payne,
Kyle R. Klicker,
Gary Kiebel,
Ken Auberry,
Eric G. Stephan,
Bobbie-Jo M. Webb-Robertson,
Deborah K. Gracio:
Integrating Evolving Tools for Proteomics Research.
METMBS 2004: 307-313 |
6 | | Kyle R. Klicker,
Mudita Singhal,
Eric G. Stephan,
Lynn Trease,
Deborah K. Gracio:
Computational Cell Environment: A Problem Solving Environment for Integrating Diverse Biological Data.
METMBS 2004: 422-428 |
5 | EE | George Chin Jr.,
Eric G. Stephan,
Deborah K. Gracio:
Computing through scientific abstractions in SysBioPSE.
SMC (1) 2004: 70-75 |
4 | EE | George Chin Jr.,
Eric G. Stephan,
Kyle R. Klicker,
Abigail L. Corrigan,
Heidi J. Sofia:
Supporting Computational Visual Theories in Biology.
VL/HCC 2004: 69-71 |
2003 |
3 | EE | Eric G. Stephan,
George Chin Jr.,
Kyle R. Klicker,
Abigail L. Corrigan,
Heidi J. Sofia:
A Symbolic Logic Strategy For Mapping Biological Concepts in the HERBE Prototype.
CSB 2003: 419-420 |
2002 |
2 | | Karen Schuchardt,
James D. Myers,
Eric G. Stephan:
A Web-Based Data Architecture for Problem-Solving Environments: Application of Distributed Authoring and Versioning to the Extensible Computational Chemistry Environment.
Cluster Computing 5(3): 287-296 (2002) |
2001 |
1 | EE | Karen Schuchardt,
James D. Myers,
Eric G. Stephan:
Open Data Management Solutions for Problem Solving Environments: Application of Distributed Authoring and Versioning to the Extensible Computational Chemistry Environment.
HPDC 2001: 228- |