2008 |
27 | EE | David J. Galas,
Matti Nykter,
Gregory W. Carter,
Nathan D. Price,
Ilya Shmulevich:
Set-based complexity and biological information
CoRR abs/0801.4024: (2008) |
26 | EE | Harri Lähdesmäki,
Ilya Shmulevich:
Learning the structure of dynamic Bayesian networks from time series and steady state measurements.
Machine Learning 71(2-3): 185-217 (2008) |
2006 |
25 | EE | Harri Lähdesmäki,
Sampsa Hautaniemi,
Ilya Shmulevich,
Olli Yli-Harja:
Relationships between probabilistic Boolean networks and dynamic Bayesian networks as models of gene regulatory networks.
Signal Processing 86(4): 814-834 (2006) |
2005 |
24 | EE | Harri Lähdesmäki,
Ilya Shmulevich,
Valerie Dunmire,
Olli Yli-Harja,
Wei Zhang:
In silico microdissection of microarray data from heterogeneous cell populations.
BMC Bioinformatics 6: 54 (2005) |
23 | EE | Cristian Mircean,
Ilya Shmulevich,
David Cogdell,
Woonyoung Choi,
Yu Jia,
Ioan Tabus,
Stanley R. Hamilton,
Wei Zhang:
Robust estimation of protein expression ratios with lysate microarray technology.
Bioinformatics 21(9): 1935-1942 (2005) |
22 | EE | Carlos Gershenson,
Stuart A. Kauffman,
Ilya Shmulevich:
The Role of Redundancy in the Robustness of Random Boolean Networks
CoRR abs/nlin/0511018: (2005) |
21 | EE | Trent Toulouse,
Ping Ao,
Ilya Shmulevich,
Stuart A. Kauffman:
Noise in a small genetic circuit that undergoes bifurcation.
Complexity 11(1): 45-51 (2005) |
20 | EE | Antti Niemistö,
Valerie Dunmire,
Olli Yli-Harja,
Wei Zhang,
Ilya Shmulevich:
Robust quantification of in vitro angiogenesis through image analysis.
IEEE Trans. Med. Imaging 24(4): 549-553 (2005) |
19 | EE | Marcel Brun,
Edward R. Dougherty,
Ilya Shmulevich:
Steady-state probabilities for attractors in probabilistic Boolean networks.
Signal Processing 85(10): 1993-2013 (2005) |
2004 |
18 | EE | Ronaldo Fumio Hashimoto,
Seungchan Kim,
Ilya Shmulevich,
Wei Zhang,
Michael L. Bittner,
Edward R. Dougherty:
Growing genetic regulatory networks from seed genes.
Bioinformatics 20(8): 1241-1247 (2004) |
2003 |
17 | EE | Harri Lähdesmäki,
Ilya Shmulevich,
Olli Yli-Harja:
On Learning Gene Regulatory Networks Under the Boolean Network Model.
Machine Learning 52(1-2): 147-167 (2003) |
16 | EE | Jaakko Astola,
Edward R. Dougherty,
Ilya Shmulevich,
Ioan Tabus:
Genomic signal processing.
Signal Processing 83(4): 691-694 (2003) |
15 | EE | Edward R. Dougherty,
Ilya Shmulevich:
Mappings between probabilistic Boolean networks.
Signal Processing 83(4): 799-809 (2003) |
2002 |
14 | | Ilya Shmulevich,
Edward R. Dougherty,
Wei Zhang:
ayesian automatic relevance determination algorithms for classifying gene expression data.
Bioinformatics 18(10): 1332-1339 (2002) |
13 | | Ilya Shmulevich,
Edward R. Dougherty,
Seungchan Kim,
Wei Zhang:
Probabilistic Boolean networks: a rule-based uncertainty model for gene regulatory networks.
Bioinformatics 18(2): 261-274 (2002) |
12 | | Ilya Shmulevich,
Wei Zhang:
Binary analysis and optimization-based normalization of gene expression data.
Bioinformatics 18(4): 555-565 (2002) |
11 | EE | Aleksey D. Korshunov,
Ilya Shmulevich:
On the distribution of the number of monotone Boolean functions relative to the number of lower units.
Discrete Mathematics 257(2-3): 463-479 (2002) |
10 | EE | Vladimir Katkovnik,
Ilya Shmulevich:
Kernel density estimation with adaptive varying window size.
Pattern Recognition Letters 23(14): 1641-1648 (2002) |
2001 |
9 | | Ilya Shmulevich,
Moncef Gabbouj,
Jaakko Astola:
Complexity of the consistency problem for certain Post classes.
IEEE Transactions on Systems, Man, and Cybernetics, Part B 31(2): 251-253 (2001) |
8 | EE | Ilya Shmulevich,
Aleksey D. Korshunov,
Jaakko Astola:
Almost all monotone Boolean functions are polynomially learnable using membership queries.
Inf. Process. Lett. 79(5): 211-213 (2001) |
7 | EE | Pertti Koivisto,
Olli Yli-Harja,
Antti Niemistö,
Ilya Shmulevich:
Breakdown probabilities of recursive stack filters.
Signal Processing 81(1): 227-231 (2001) |
6 | EE | Olli Yli-Harja,
Pertti Koivisto,
J. Andrew Bangham,
Gavin C. Cawley,
Richard Harvey,
Ilya Shmulevich:
Simplified implementation of the recursive median sieve.
Signal Processing 81(7): 1565-1570 (2001) |
2000 |
5 | | Bogdan Cramariuc,
Ilya Shmulevich,
Moncef Gabbouj,
Asko Makela:
A New Image Similarity Measure Based on Ordinal Correlation.
ICIP 2000 |
1999 |
4 | | Vladimir P. Melnik,
Ilya Shmulevich,
Karen Egiazarian,
Jaakko Astola:
Image Denoising Using a Block-Median Pyramid.
ICIP (4) 1999: 162-166 |
3 | | Ilya Shmulevich,
Vladimir P. Melnik,
Karen Egiazarian:
Combination of transform based denoising and stack filtering for non-Gaussian noise suppression.
NSIP 1999: 282-286 |
2 | | Olli Yli-Harja,
Ilya Shmulevich,
Kjell Lemström:
Graph-based smoothing of class data with applications in musical key finding.
NSIP 1999: 311-315 |
1 | | Ilya Shmulevich,
Vladimir P. Melnik,
Karen Egiazarian:
Optimization of stack filters using sample selection probabilities.
NSIP 1999: 496-500 |