2008 | ||
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27 | EE | David J. Galas, Matti Nykter, Gregory W. Carter, Nathan D. Price, Ilya Shmulevich: Set-based complexity and biological information CoRR abs/0801.4024: (2008) |
26 | EE | Harri Lähdesmäki, Ilya Shmulevich: Learning the structure of dynamic Bayesian networks from time series and steady state measurements. Machine Learning 71(2-3): 185-217 (2008) |
2006 | ||
25 | EE | Harri Lähdesmäki, Sampsa Hautaniemi, Ilya Shmulevich, Olli Yli-Harja: Relationships between probabilistic Boolean networks and dynamic Bayesian networks as models of gene regulatory networks. Signal Processing 86(4): 814-834 (2006) |
2005 | ||
24 | EE | Harri Lähdesmäki, Ilya Shmulevich, Valerie Dunmire, Olli Yli-Harja, Wei Zhang: In silico microdissection of microarray data from heterogeneous cell populations. BMC Bioinformatics 6: 54 (2005) |
23 | EE | Cristian Mircean, Ilya Shmulevich, David Cogdell, Woonyoung Choi, Yu Jia, Ioan Tabus, Stanley R. Hamilton, Wei Zhang: Robust estimation of protein expression ratios with lysate microarray technology. Bioinformatics 21(9): 1935-1942 (2005) |
22 | EE | Carlos Gershenson, Stuart A. Kauffman, Ilya Shmulevich: The Role of Redundancy in the Robustness of Random Boolean Networks CoRR abs/nlin/0511018: (2005) |
21 | EE | Trent Toulouse, Ping Ao, Ilya Shmulevich, Stuart A. Kauffman: Noise in a small genetic circuit that undergoes bifurcation. Complexity 11(1): 45-51 (2005) |
20 | EE | Antti Niemistö, Valerie Dunmire, Olli Yli-Harja, Wei Zhang, Ilya Shmulevich: Robust quantification of in vitro angiogenesis through image analysis. IEEE Trans. Med. Imaging 24(4): 549-553 (2005) |
19 | EE | Marcel Brun, Edward R. Dougherty, Ilya Shmulevich: Steady-state probabilities for attractors in probabilistic Boolean networks. Signal Processing 85(10): 1993-2013 (2005) |
2004 | ||
18 | EE | Ronaldo Fumio Hashimoto, Seungchan Kim, Ilya Shmulevich, Wei Zhang, Michael L. Bittner, Edward R. Dougherty: Growing genetic regulatory networks from seed genes. Bioinformatics 20(8): 1241-1247 (2004) |
2003 | ||
17 | EE | Harri Lähdesmäki, Ilya Shmulevich, Olli Yli-Harja: On Learning Gene Regulatory Networks Under the Boolean Network Model. Machine Learning 52(1-2): 147-167 (2003) |
16 | EE | Jaakko Astola, Edward R. Dougherty, Ilya Shmulevich, Ioan Tabus: Genomic signal processing. Signal Processing 83(4): 691-694 (2003) |
15 | EE | Edward R. Dougherty, Ilya Shmulevich: Mappings between probabilistic Boolean networks. Signal Processing 83(4): 799-809 (2003) |
2002 | ||
14 | Ilya Shmulevich, Edward R. Dougherty, Wei Zhang: ayesian automatic relevance determination algorithms for classifying gene expression data. Bioinformatics 18(10): 1332-1339 (2002) | |
13 | Ilya Shmulevich, Edward R. Dougherty, Seungchan Kim, Wei Zhang: Probabilistic Boolean networks: a rule-based uncertainty model for gene regulatory networks. Bioinformatics 18(2): 261-274 (2002) | |
12 | Ilya Shmulevich, Wei Zhang: Binary analysis and optimization-based normalization of gene expression data. Bioinformatics 18(4): 555-565 (2002) | |
11 | EE | Aleksey D. Korshunov, Ilya Shmulevich: On the distribution of the number of monotone Boolean functions relative to the number of lower units. Discrete Mathematics 257(2-3): 463-479 (2002) |
10 | EE | Vladimir Katkovnik, Ilya Shmulevich: Kernel density estimation with adaptive varying window size. Pattern Recognition Letters 23(14): 1641-1648 (2002) |
2001 | ||
9 | Ilya Shmulevich, Moncef Gabbouj, Jaakko Astola: Complexity of the consistency problem for certain Post classes. IEEE Transactions on Systems, Man, and Cybernetics, Part B 31(2): 251-253 (2001) | |
8 | EE | Ilya Shmulevich, Aleksey D. Korshunov, Jaakko Astola: Almost all monotone Boolean functions are polynomially learnable using membership queries. Inf. Process. Lett. 79(5): 211-213 (2001) |
7 | EE | Pertti Koivisto, Olli Yli-Harja, Antti Niemistö, Ilya Shmulevich: Breakdown probabilities of recursive stack filters. Signal Processing 81(1): 227-231 (2001) |
6 | EE | Olli Yli-Harja, Pertti Koivisto, J. Andrew Bangham, Gavin C. Cawley, Richard Harvey, Ilya Shmulevich: Simplified implementation of the recursive median sieve. Signal Processing 81(7): 1565-1570 (2001) |
2000 | ||
5 | Bogdan Cramariuc, Ilya Shmulevich, Moncef Gabbouj, Asko Makela: A New Image Similarity Measure Based on Ordinal Correlation. ICIP 2000 | |
1999 | ||
4 | Vladimir P. Melnik, Ilya Shmulevich, Karen Egiazarian, Jaakko Astola: Image Denoising Using a Block-Median Pyramid. ICIP (4) 1999: 162-166 | |
3 | Ilya Shmulevich, Vladimir P. Melnik, Karen Egiazarian: Combination of transform based denoising and stack filtering for non-Gaussian noise suppression. NSIP 1999: 282-286 | |
2 | Olli Yli-Harja, Ilya Shmulevich, Kjell Lemström: Graph-based smoothing of class data with applications in musical key finding. NSIP 1999: 311-315 | |
1 | Ilya Shmulevich, Vladimir P. Melnik, Karen Egiazarian: Optimization of stack filters using sample selection probabilities. NSIP 1999: 496-500 |