2007 |
9 | EE | Marko Laakso,
Sari Tuupanen,
Auli Karhu,
Rainer Lehtonen,
Lauri A. Aaltonen,
Sampsa Hautaniemi:
Computational identification of candidate loci for recessively inherited mutation using high-throughput SNP arrays.
Bioinformatics 23(15): 1952-1961 (2007) |
2006 |
8 | EE | John A. Berger,
Sampsa Hautaniemi,
Sanjit K. Mitra,
Jaakko Astola:
Jointly Analyzing Gene Expression and Copy Number Data in Breast Cancer Using Data Reduction Models.
IEEE/ACM Trans. Comput. Biology Bioinform. 3(1): 2-16 (2006) |
7 | EE | Harri Lähdesmäki,
Sampsa Hautaniemi,
Ilya Shmulevich,
Olli Yli-Harja:
Relationships between probabilistic Boolean networks and dynamic Bayesian networks as models of gene regulatory networks.
Signal Processing 86(4): 814-834 (2006) |
2005 |
6 | EE | Sampsa Hautaniemi,
Sourabh Kharait,
Akihiro Iwabu,
Alan Wells,
Douglas A. Lauffenburger:
Modeling of signal-response cascades using decision tree analysis.
Bioinformatics 21(9): 2027-2035 (2005) |
2004 |
5 | EE | John A. Berger,
Sampsa Hautaniemi,
Sanjit K. Mitra:
Comparative Analysis of Gene Expression and DNA Copy Number Data for Pancreatic and Breast Cancers Using an Orthogonal Decomposition.
CSB 2004: 584-585 |
4 | EE | John A. Berger,
Sampsa Hautaniemi,
Anna-Kaarina Järvinen,
Henrik Edgren,
Sanjit K. Mitra,
Jaakko Astola:
Optimized LOWESS normalization parameter selection for DNA microarray data.
BMC Bioinformatics 5: 194 (2004) |
2003 |
3 | | Reija Autio,
Sampsa Hautaniemi,
Päivikki Kauraniemi,
Olli Yli-Harja,
Jaakko Astola,
Maija Wolf,
Anne Kallioniemi:
CGH-Plotter: MATLAB toolbox for CGH-data analysis.
Bioinformatics 19(13): 1714-1715 (2003) |
2 | | Sampsa Hautaniemi,
Henrik Edgren,
Petri Vesanen,
Maija Wolf,
Anna-Kaarina Järvinen,
Olli Yli-Harja,
Jaakko Astola,
Olli-P. Kallioniemi,
Outi Monni:
A novel strategy for microarray quality control using Bayesian networks.
Bioinformatics 19(16): 2031-2038 (2003) |
1 | EE | Sampsa Hautaniemi,
Olli Yli-Harja,
Jaakko Astola,
Päivikki Kauraniemi,
Anne Kallioniemi,
Maija Wolf,
Jimmy Ruiz,
Spyro Mousses,
Olli-P. Kallioniemi:
Analysis and Visualization of Gene Expression Microarray Data in Human Cancer Using Self-Organizing Maps.
Machine Learning 52(1-2): 45-66 (2003) |