Burkhard Rost

2008
47	EE	Yana Bromberg, Burkhard Rost: Comprehensive in silico mutagenesis highlights functionally important residues in proteins. ECCB 2008: 207-212
46	EE	Dariusz Przybylski, Burkhard Rost: Powerful fusion: PSI-BLAST and consensus sequences. Bioinformatics 24(18): 1987-1993 (2008)
45	EE	Marco Lippi, Andrea Passerini, Marco Punta, Burkhard Rost, Paolo Frasconi: MetalDetector: a web server for predicting metal-binding sites and disulfide bridges in proteins from sequence. Bioinformatics 24(18): 2094-2095 (2008)
44	EE	Yana Bromberg, Guy Yachdav, Burkhard Rost: SNAP predicts effect of mutations on protein function. Bioinformatics 24(20): 2397-2398 (2008)
43	EE	Ta-tsen Soong, Kazimierz O. Wrzeszczynski, Burkhard Rost: Physical protein-protein interactions predicted from microarrays. Bioinformatics 24(22): 2608-2614 (2008)
2007
42	EE	Yanay Ofran, Venkatesh Mysore, Burkhard Rost: Prediction of DNA-binding residues from sequence. ISMB/ECCB (Supplement of Bioinformatics) 2007: 347-353
41	EE	Avner Schlessinger, Marco Punta, Burkhard Rost: Natively unstructured regions in proteins identified from contact predictions. Bioinformatics 23(18): 2376-2384 (2007)
40	EE	Yanay Ofran, Burkhard Rost: ISIS: interaction sites identified from sequence. Bioinformatics 23(2): 13-16 (2007)
2006
39	EE	Yanay Ofran, Guy Yachdav, Eyal Mozes, Ta-tsen Soong, Rajesh Nair, Burkhard Rost: Create and assess protein networks through molecular characteristics of individual proteins. ISMB (Supplement of Bioinformatics) 2006: 402-407
38	EE	Avner Schlessinger, Guy Yachdav, Burkhard Rost: PROFbval: predict flexible and rigid residues in proteins. Bioinformatics 22(7): 891-893 (2006)
37	EE	Avner Schlessinger, Yanay Ofran, Guy Yachdav, Burkhard Rost: Epitome: database of structure-inferred antigenic epitopes. Nucleic Acids Research 34(Database-Issue): 777-780 (2006)
36	EE	Henry R. Bigelow, Burkhard Rost: PROFtmb: a web server for predicting bacterial transmembrane beta barrel proteins. Nucleic Acids Research 34(Web-Server-Issue): 186-188 (2006)
2005
35	EE	H. V. Jagadish, David J. States, Burkhard Rost: ISMB 2005. ISMB (Supplement of Bioinformatics) 2005: 1-2
34	EE	H. V. Jagadish, David J. States, Burkhard Rost: ISMB 2005 Organization. ISMB (Supplement of Bioinformatics) 2005: 3-6
33	EE	Marco Punta, Burkhard Rost: PROFcon: novel prediction of long-range contacts. Bioinformatics 21(13): 2960-2968 (2005)
32	EE	Sven Mika, Burkhard Rost: NMPdb: Database of Nuclear Matrix Proteins. Nucleic Acids Research 33(Database-Issue): 160-163 (2005)
31	EE	Osvaldo Graña, Volker A. Eyrich, Florencio Pazos, Burkhard Rost, Alfonso Valencia: EVAcon: a protein contact prediction evaluation service. Nucleic Acids Research 33(Web-Server-Issue): 347-351 (2005)
2004
30	EE	Sven Mika, Burkhard Rost: Protein names precisely peeled off free text. ISMB/ECCB (Supplement of Bioinformatics) 2004: 241-247
29		Rajesh Nair, Burkhard Rost: Annotating Protein Function through Lexical Analysis. AI Magazine 25(1): 45-56 (2004)
28		Janice I. Glasgow, Igor Jurisica, Burkhard Rost: AI and Bioinformatics. AI Magazine 25(1): 7-8 (2004)
27		Burkhard Rost, Guy Yachdav, Jinfeng Liu: The PredictProtein server. Nucleic Acids Research 32(Web-Server-Issue): 321-326 (2004)
26		Rajesh Nair, Burkhard Rost: LOCnet and LOCtarget: sub-cellular localization for structural genomics targets. Nucleic Acids Research 32(Web-Server-Issue): 517-521 (2004)
25		Jinfeng Liu, Burkhard Rost: CHOP: parsing proteins into structural domains. Nucleic Acids Research 32(Web-Server-Issue): 569-571 (2004)
24		Sven Mika, Burkhard Rost: NLProt: extracting protein names and sequences from papers. Nucleic Acids Research 32(Web-Server-Issue): 634-637 (2004)
2003
23		Rajesh Nair, Phil Carter, Burkhard Rost: NLSdb: database of nuclear localization signals. Nucleic Acids Research 31(1): 397-399 (2003)
22		Phil Carter, Jinfeng Liu, Burkhard Rost: PEP: Predictions for Entire Proteomes. Nucleic Acids Research 31(1): 410-413 (2003)
21		Phil Carter, Claus A. F. Andersen, Burkhard Rost: DSSPcont: continuous secondary structure assignments for proteins. Nucleic Acids Research 31(13): 3293-3295 (2003)
20		Burkhard Rost, Jinfeng Liu: The PredictProtein server. Nucleic Acids Research 31(13): 3300-3304 (2003)
19		Volker A. Eyrich, Burkhard Rost: META-PP: single interface to crucial prediction servers. Nucleic Acids Research 31(13): 3308-3310 (2003)
18		Ingrid Y. Y. Koh, Volker A. Eyrich, Marc A. Martí-Renom, Dariusz Przybylski, Mallur S. Madhusudhan, Narayanan Eswar, Osvaldo Graña, Florencio Pazos, Alfonso Valencia, Andrej Sali, Burkhard Rost: EVA: evaluation of protein structure prediction servers. Nucleic Acids Research 31(13): 3311-3315 (2003)
17		Rajesh Nair, Burkhard Rost: LOC3D: annotate sub-cellular localization for protein structures. Nucleic Acids Research 31(13): 3337-3340 (2003)
16		Andrew Kernytsky, Burkhard Rost: Static benchmarking of membrane helix predictions. Nucleic Acids Research 31(13): 3642-3644 (2003)
15		Sven Mika, Burkhard Rost: UniqueProt: creating representative protein sequence sets. Nucleic Acids Research 31(13): 3789-3791 (2003)
14		Jinfeng Liu, Burkhard Rost: NORSp: predictions of long regions without regular secondary structure. Nucleic Acids Research 31(13): 3833-3835 (2003)
2002
13		Janice I. Glasgow, Burkhard Rost: ISMB 2002 ISMB 2002: 1-4
12		Rajesh Nair, Burkhard Rost: Inferring sub-cellular localization through automated lexical analysis. ISMB 2002: 78-86
11		Burkhard Rost, Barry Honig, Alfonso Valencia: Bioinformatics in structural genomics - Editorial. Bioinformatics 18(7): 897 (2002)
10		Jinfeng Liu, Burkhard Rost: Target space for structural genomics revisited. Bioinformatics 18(7): 922-933 (2002)
2001
9		Volker A. Eyrich, Marc A. Martí-Renom, Dariusz Przybylski, Mallur S. Madhusudhan, András Fiser, Florencio Pazos, Alfonso Valencia, Andrej Sali, Burkhard Rost: EVA: continuous automatic evaluation of protein structure prediction servers. Bioinformatics 17(12): 1242-1243 (2001)
1999
8		Florencio Pazos, Burkhard Rost, Alfonso Valencia: A platform for integrating threading results with protein family analyses. Bioinformatics 15(12): 1062-1063 (1999)
1997
7		Burkhard Rost: Learning from Evolution to Predict Protein Structure. BCEC 1997: 87-101
6		Burkhard Rost, Seán I. O'Donoghue: Sisyphus and prediction of protein structure. Computer Applications in the Biosciences 13(4): 345-356 (1997)
1996
5		Burkhard Rost, Rita Casadio, Piero Fariselli: Refining Neural Network Predictions for Helical Transmembrane Proteins by Dynamic Programming. ISMB 1996: 192-200
1995
4		Burkhard Rost: TOPITS: Threading One-Dimensional Predictions Into Three-Dimensional Structures. ISMB 1995: 314-321
1994
3		Burkhard Rost, Chris Sander, Reinhard Schneider: Evolution and Neural Networks - Protein Secondary Structure Prediction Above 71% Accuracy. HICSS (5) 1994: 385-394
2		Burkhard Rost, Chris Sander, Reinhard Schneider: PHD - an automatic mail server for protein secondary structure prediction. Computer Applications in the Biosciences 10(1): 53-60 (1994)
1992
1	EE	Burkhard Rost, Chris Sander: Exercising Multi-Layered Networks on Protein Secondary Structure. Int. J. Neural Syst. 3(Supplement): 209-220 (1992)

Coauthor Index

1	Claus A. F. Andersen	[21]
2	Henry R. Bigelow	[36]
3	Yana Bromberg	[44] [47]
4	Phil Carter	[21] [22] [23]
5	Rita Casadio	[5]
6	Narayanan Eswar	[18]
7	Volker A. Eyrich	[9] [18] [19] [31]
8	Piero Fariselli	[5]
9	András Fiser	[9]
10	Paolo Frasconi	[45]
11	Janice I. Glasgow	[13] [28]
12	Osvaldo Graña	[18] [31]
13	Barry Honig	[11]
14	H. V. Jagadish	[34] [35]
15	Igor Jurisica	[28]
16	Andrew Kernytsky	[16]
17	Ingrid Y. Y. Koh	[18]
18	Marco Lippi	[45]
19	Jinfeng Liu	[10] [14] [20] [22] [25] [27]
20	Mallur S. Madhusudhan	[9] [18]
21	Marc A. Martí-Renom	[9] [18]
22	Sven Mika	[15] [24] [30] [32]
23	Eyal Mozes	[39]
24	Venkatesh Mysore	[42]
25	Rajesh Nair	[12] [17] [23] [26] [29] [39]
26	Seán I. O'Donoghue	[6]
27	Yanay Ofran	[37] [39] [40] [42]
28	Andrea Passerini	[45]
29	Florencio Pazos	[8] [9] [18] [31]
30	Dariusz Przybylski	[9] [18] [46]
31	Marco Punta	[33] [41] [45]
32	Andrej Sali	[9] [18]
33	Chris Sander	[1] [2] [3]
34	Avner Schlessinger	[37] [38] [41]
35	Reinhard Schneider	[2] [3]
36	Ta-tsen Soong	[39] [43]
37	David J. States	[34] [35]
38	Alfonso Valencia	[8] [9] [11] [18] [31]
39	Kazimierz O. Wrzeszczynski	[43]
40	Guy Yachdav	[27] [37] [38] [39] [44]

Colors in the list of coauthors