Isaac S. Kohane

2009
35	EE	m. c. schraefel, Paul André, Ryen White, Desney Tan, Tim Berners-Lee, Sunny Consolvo, Robert Jacobs, Isaac S. Kohane, Christopher A. Le Dantec, Lena Mamykina, Gary Marsden, Ben Shneiderman, Peter Szolovits, Daniel J. Weitzner: Interacting with eHealth: towards grand challenges for HCI. CHI Extended Abstracts 2009: 3309-3312
2006
34	EE	Fulvia Ferrazzi, Paola Sebastiani, Isaac S. Kohane, Marco Ramoni, Riccardo Bellazzi: Dynamic Bayesian Networks in Modelling Cellular Systems: a Critical Appraisal on Simulated Data. CBMS 2006: 544-549
33	EE	Hidenori Inaoka, Yutaka Fukuoka, Isaac S. Kohane: Lower expression of genes near microRNA in C. elegans germline. BMC Bioinformatics 7: 112 (2006)
32	EE	Voichita D. Marinescu, Isaac S. Kohane, Tae-Kyung Kim, David A. Harmin, Michael E. Greenberg, Alberto Riva: START: an automated tool for serial analysis of chromatin occupancy data. Bioinformatics 22(8): 999-1001 (2006)
2005
31	EE	Scott L. Carter, Aron C. Eklund, Brigham H. Mecham, Isaac S. Kohane, Zoltan Szallasi: Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements. BMC Bioinformatics 6: 107 (2005)
30	EE	Cecily J. Wolfe, Isaac S. Kohane, Atul J. Butte: Systematic survey reveals general applicability of "guilt-by-association" within gene coexpression networks. BMC Bioinformatics 6: 227 (2005)
29	EE	Voichita D. Marinescu, Isaac S. Kohane, Alberto Riva: MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes. BMC Bioinformatics 6: 79 (2005)
28	EE	Sek Won Kong, Kyu Baek Hwang, Richard D. Kim, Byoung-Tak Zhang, Steven A. Greenberg, Isaac S. Kohane, Peter J. Park: CrossChip: a system supporting comparative analysis of different generations of Affymetrix arrays. Bioinformatics 21(9): 2116-2117 (2005)
27	EE	Voichita D. Marinescu, Isaac S. Kohane, Alberto Riva: The MAPPER database: a multi-genome catalog of putative transcription factor binding sites. Nucleic Acids Research 33(Database-Issue): 91-97 (2005)
2004
26	EE	Dominic J. Allocco, Isaac S. Kohane, Atul J. Butte: Quantifying the relationship between co-expression, co-regulation and gene function. BMC Bioinformatics 5: 18 (2004)
25	EE	Alberto Riva, Isaac S. Kohane: A SNP-centric database for the investigation of the human genome. BMC Bioinformatics 5: 33 (2004)
2003
24	EE	Francisco M. de la Vega, Kenneth K. Kidd, Isaac S. Kohane: Human Genome Variation: Haplotypes, Linkage Disequilibrium, and Populations - Session Introduction. Pacific Symposium on Biocomputing 2003: 463-465
23	EE	Ashish Nimgaonkar, Despina Sanoudou, Atul J. Butte, Judith N. Haslett, Louis M. Kunkel, Alan H. Beggs, Isaac S. Kohane: Reproducibility of gene expression across generations of Affymetrix microarrays. BMC Bioinformatics 4: 27 (2003)
22		Kyungjoon Lee, Isaac S. Kohane, Atul J. Butte: PGAGENE: integrating quantitative gene-specific results from the NHLBI Programs for Genomic Applications. Bioinformatics 19(6): 778-779 (2003)
21	EE	Paola Sebastiani, Isaac S. Kohane, Marco Ramoni: Editorial: Methods in Functional Genomics. Machine Learning 52(1-2): 5-9 (2003)
2002
20		Peter J. Park, Lu Tian, Isaac S. Kohane: Linking gene expression data with patient survival times using partial least squares. ISMB 2002: 120-127
19	EE	Francisco M. de la Vega, Isaac S. Kohane, J. A. Schneider, J. C. Stephens: Human Genome Variation: Disease, Drug Response, and Clinical Phenotypes - Session Introduction. Pacific Symposium on Biocomputing 2002: 3-5
18		Peter J. Park, Atul J. Butte, Isaac S. Kohane: Comparing expression profiles of genes with similar promoter regions. Bioinformatics 18(12): 1576-1584 (2002)
17		Alberto Riva, Isaac S. Kohane: SNPper: retrieval and analysis of human SNPs. Bioinformatics 18(12): 1681-1685 (2002)
16		Winston Patrick Kuo, Tor-Kristian Jenssen, Atul J. Butte, Lucila Ohno-Machado, Isaac S. Kohane: Analysis of matched mRNA measurements from two different microarray technologies. Bioinformatics 18(3): 405-412 (2002)
15	EE	Ju-Han Kim, Isaac S. Kohane, Lucila Ohno-Machado: Visualization and evaluation of clusters for exploratory analysis of gene expression data. Journal of Biomedical Informatics 35(1): 25-36 (2002)
2001
14	EE	Francisco M. de la Vega, Martin Kreitman, Isaac S. Kohane: Human Genome Variation: Linking Genotypes to Clinical Phenotypes - Session Introduction. Pacific Symposium on Biocomputing 2001: 3-5
13	EE	Ju-Han Kim, Lucila Ohno-Machado, Isaac S. Kohane: Unsupervised Learning from Complex Data: The Matrix Incision Tree Algorithm. Pacific Symposium on Biocomputing 2001: 30-41
12	EE	Christine L. Tsien, T. A. Libermann, X. Gu, Isaac S. Kohane: On Reporting Fold Differences. Pacific Symposium on Biocomputing 2001: 496-507
11	EE	Atul J. Butte, J. Ye, G. Niederfellner, K. Rett, H. U. Häring, M. F. White, Isaac S. Kohane: Determining Significant Fold Differences in Gene Expression Analysis. Pacific Symposium on Biocomputing 2001: 6-17
10	EE	Ben Y. Reis, Atul J. Butte, Isaac S. Kohane: Extracting Knowledge from Dynamics in Gene Expression. Journal of Biomedical Informatics 34(1): 15-27 (2001)
9	EE	Ben Y. Reis, Atul J. Butte, Isaac S. Kohane: Reply. Journal of Biomedical Informatics 34(4): 299-300 (2001)
8	EE	Atul J. Butte, Ling Bao, Ben Y. Reis, Timothy W. Watkins, Isaac S. Kohane: Comparing the Similarity of Time-Series Gene Expression Using Signal Processing Metrics. Journal of Biomedical Informatics 34(6): 396-405 (2001)
2000
7		Christine L. Tsien, Isaac S. Kohane, Neil McIntosh: Multiple signal integration by decision tree induction to detect artifacts in the neonatal intensive care unit. Artificial Intelligence in Medicine 19(3): 189-202 (2000)
1998
6		Christine L. Tsien, Hamish S. F. Fraser, Isaac S. Kohane: LRTree: A Hybrid technique for Classifying Myocardial Infarction Data Containing Unknown Attribute Values. PAKDD 1998: 409-411
1996
5		Ira J. Haimowitz, Isaac S. Kohane: Managing temporal worlds for medical trend diagnosis. Artificial Intelligence in Medicine 8(3): 299-321 (1996)
1995
4		Isaac S. Kohane: Editorial. Artificial Intelligence in Medicine 7(6): 471-472 (1995)
3		Ira J. Haimowitz, P. P. Le, Isaac S. Kohane: Clinical monitoring using regression-based trend templates. Artificial Intelligence in Medicine 7(6): 473-496 (1995)
1993
2		Ira J. Haimowitz, Isaac S. Kohane: An Epistemology for Clinically Significant Trends. AAAI 1993: 176-181
1		Ira J. Haimowitz, Isaac S. Kohane: Automated Trend Detection with Alternate Temporal Hypotheses. IJCAI 1993: 146-151

Coauthor Index

1	Dominic J. Allocco	[26]
2	Paul André	[35]
3	Ling Bao	[8]
4	Alan H. Beggs	[23]
5	Riccardo Bellazzi	[34]
6	Tim Berners-Lee	[35]
7	Atul J. Butte	[8] [9] [10] [11] [16] [18] [22] [23] [26] [30]
8	Scott L. Carter	[31]
9	Sunny Consolvo	[35]
10	Christopher A. Le Dantec	[35]
11	Aron C. Eklund	[31]
12	Fulvia Ferrazzi	[34]
13	Hamish S. F. Fraser	[6]
14	Yutaka Fukuoka	[33]
15	Michael E. Greenberg	[32]
16	Steven A. Greenberg	[28]
17	X. Gu	[12]
18	Ira J. Haimowitz	[1] [2] [3] [5]
19	H. U. Häring	[11]
20	David A. Harmin	[32]
21	Judith N. Haslett	[23]
22	Kyu Baek Hwang	[28]
23	Hidenori Inaoka	[33]
24	Robert Jacobs	[35]
25	Tor-Kristian Jenssen	[16]
26	Kenneth K. Kidd	[24]
27	Ju-Han Kim	[13] [15]
28	Richard D. Kim	[28]
29	Tae-Kyung Kim	[32]
30	Sek Won Kong	[28]
31	Martin Kreitman	[14]
32	Louis M. Kunkel	[23]
33	Winston Patrick Kuo	[16]
34	P. P. Le	[3]
35	Kyungjoon Lee	[22]
36	T. A. Libermann	[12]
37	Lena Mamykina	[35]
38	Voichita D. Marinescu	[27] [29] [32]
39	Gary Marsden	[35]
40	Neil McIntosh	[7]
41	Brigham H. Mecham	[31]
42	G. Niederfellner	[11]
43	Ashish Nimgaonkar	[23]
44	Lucila Ohno-Machado	[13] [15] [16]
45	Peter J. Park	[18] [20] [28]
46	Marco Ramoni	[21] [34]
47	Ben Y. Reis	[8] [9] [10]
48	K. Rett	[11]
49	Alberto Riva	[17] [25] [27] [29] [32]
50	Despina Sanoudou	[23]
51	J. A. Schneider	[19]
52	Monica M. C. Schraefel (m. c. schraefel)	[35]
53	Paola Sebastiani	[21] [34]
54	Ben Shneiderman	[35]
55	J. C. Stephens	[19]
56	Zoltan Szallasi	[31]
57	Peter Szolovits	[35]
58	Desney Tan	[35]
59	Lu Tian	[20]
60	Christine L. Tsien	[6] [7] [12]
61	Francisco M. de la Vega	[14] [19] [24]
62	Timothy W. Watkins	[8]
63	Daniel J. Weitzner	[35]
64	M. F. White	[11]
65	Ryen W. White (Ryen White)	[35]
66	Cecily J. Wolfe	[30]
67	J. Ye	[11]
68	Byoung-Tak Zhang	[28]

Colors in the list of coauthors