2005 |
26 | EE | Michael Hu,
Paul E. Kearney,
Jonathan H. Badger:
A Collapsing Method for the Efficient Recovery of Optimal Edges in Phylogenetic Trees.
International Journal on Artificial Intelligence Tools 14(5): 717-732 (2005) |
2004 |
25 | EE | Jonathan H. Badger,
Paul E. Kearney,
Ming Li,
John Tsang,
Tao Jiang:
Selecting the branches for an evolutionary tree.: A polynomial time approximation scheme.
J. Algorithms 51(1): 1-14 (2004) |
2003 |
24 | EE | Michael Hu,
Paul E. Kearney,
Jonathan H. Badger:
A Collapsing Method for the Efficient Recovery of Optimal Edges in Phylogenetic Trees.
BIBE 2003: 95- |
23 | EE | Paul E. Kearney,
J. Ian Munro,
Derek Phillips:
Efficient Generation of Uniform Samples from Phylogenetic Trees.
WABI 2003: 177-189 |
2002 |
22 | | Ryan B. Hayward,
Paul E. Kearney,
Andrew J. Malton:
NeST graphs.
Discrete Applied Mathematics 121(1-3): 139-153 (2002) |
21 | EE | Deep Jaitly,
Paul E. Kearney,
Guo-Hui Lin,
Bin Ma:
Methods for reconstructing the history of tandem repeats and their application to the human genome.
J. Comput. Syst. Sci. 65(3): 494-507 (2002) |
2001 |
20 | EE | Giovanni Caire,
Wim Coulier,
Francisco J. Garijo,
Jorge J. Gómez-Sanz,
Juan Pavón,
Francisco Leal,
Paulo Chainho,
Paul E. Kearney,
Jamie Stark,
Richard Evans,
Philippe Massonet:
Agent Oriented Analysis Using Message/UML.
AOSE 2001: 119-135 |
19 | EE | Jennifer E. Steinbachs,
Paul E. Kearney:
Phylogenetics in the Post-Genomic Era - Session Introduction.
Pacific Symposium on Biocomputing 2001: 544-546 |
18 | EE | Jonathan H. Badger,
Paul E. Kearney:
Picking fruit from the tree of life: comments on taxonomic sampling and quartet methods.
SAC 2001: 61-67 |
17 | | Ming Li,
Jonathan H. Badger,
Xin Chen,
Sam Kwong,
Paul E. Kearney,
Haoyong Zhang:
An information-based sequence distance and its application to whole mitochondrial genome phylogeny.
Bioinformatics 17(1): 149-154 (2001) |
2000 |
16 | EE | Guo-Hui Lin,
Tao Jiang,
Paul E. Kearney:
Phylogenetic k-Root and Steiner k-Root.
ISAAC 2000: 539-551 |
15 | EE | David Bryant,
John Tsang,
Paul E. Kearney,
Ming Li:
Computing the quartet distance between evolutionary trees.
SODA 2000: 285-286 |
14 | EE | Vincent Berry,
David Bryant,
Tao Jiang,
Paul E. Kearney,
Ming Li,
Todd Wareham,
Haoyong Zhang:
A practical algorithm for recovering the best supported edges of an evolutionary tree (extended abstract).
SODA 2000: 287-296 |
13 | | Robert E. Smith,
Claudio Bonacina,
Paul E. Kearney,
Walter Merlat:
Embodiment of Evolutionary Computation in General Agents.
Evolutionary Computation 8(4): 475-493 (2000) |
12 | | Tao Jiang,
Paul E. Kearney,
Ming Li:
Some Open Problems in Computational Molecular Biology.
J. Algorithms 34(1): 194-201 (2000) |
11 | EE | Tao Jiang,
Paul E. Kearney,
Ming Li:
A Polynomial Time Approximation Scheme for Inferring Evolutionary Trees from Quartet Topologies and Its Application.
SIAM J. Comput. 30(6): 1942-1961 (2000) |
1999 |
10 | EE | Vincent Berry,
Tao Jiang,
Paul E. Kearney,
Ming Li,
Todd Wareham:
Quartet Cleaning: Improved Algorithms and Simulations.
ESA 1999: 313-324 |
9 | EE | Paul E. Kearney,
Ming Li,
John Tsang,
Tao Jiang:
Recovering Branches on the Tree of Life: An Approximation Algorithm.
SODA 1999: 537-546 |
8 | EE | Paul E. Kearney,
Ryan Hayward,
Henk Meijer:
Evolutionary Trees and Ordinal Assertions.
Algorithmica 25(2-3): 196-221 (1999) |
1998 |
7 | EE | Tao Jiang,
Paul E. Kearney,
Ming Li:
Orchestrating Quartets: Approximation and Data Correction.
FOCS 1998: 416-425 |
6 | EE | Paul E. Kearney:
The ordinal quartet method.
RECOMB 1998: 125-134 |
5 | | Paul E. Kearney,
Derek G. Corneil:
Tree Powers.
J. Algorithms 29(1): 111-131 (1998) |
1997 |
4 | | Paul E. Kearney,
Ryan Hayward,
Henk Meijer:
Inferring Evolutionary Trees from Ordinal Data.
SODA 1997: 418-426 |
3 | | Paul E. Kearney:
A Six-Point Condition for Ordinal Matrices.
Journal of Computational Biology 4(2): 143-156 (1997) |
1994 |
2 | | Ryan Hayward,
Paul E. Kearney:
Tolerance-Free NeST Representations.
CCCG 1994: 275-280 |
1 | | Paul E. Kearney,
Arvindra Sehmi,
Robert M. Smith:
Emergent Behaviour in a Multi-Agent Economic Situation.
ECAI 1994: 284-288 |