Rainer Spang

2008
23	EE	Holger Fröhlich, Tim Beißbarth, Achim Tresch, Dennis Kostka, Juby Jacob, Rainer Spang, Florian Markowetz: Analyzing gene perturbation screens with nested effects models in R and bioconductor. Bioinformatics 24(21): 2549-2550 (2008)
22	EE	Juby Jacob, Marcel Jentsch, Dennis Kostka, Stefan Bentink, Rainer Spang: Detecting hierarchical structure in molecular characteristics of disease using transitive approximations of directed graphs. Bioinformatics 24(7): 995-1001 (2008)
2007
21	EE	Florian Markowetz, Dennis Kostka, Olga G. Troyanskaya, Rainer Spang: Nested effects models for high-dimensional phenotyping screens. ISMB/ECCB (Supplement of Bioinformatics) 2007: 305-312
20	EE	Claudio Lottaz, Joern Toedling, Rainer Spang: Annotation-based distance measures for patient subgroup discovery in clinical microarray studies. Bioinformatics 23(17): 2256-2264 (2007)
19	EE	Stefanie Scheid, Rainer Spang: Compensating for Unknown Confounders in Microarray Data Analysis Using Filtered Permutations. Journal of Computational Biology 14(5): 669-681 (2007)
2006
18	EE	Stefanie Scheid, Rainer Spang: Permutation Filtering: A Novel Concept for Significance Analysis of Large-Scale Genomic Data. RECOMB 2006: 338-347
17	EE	Claudio Lottaz, Xinan Yang, Stefanie Scheid, Rainer Spang: OrderedList - a bioconductor package for detecting similarity in ordered gene lists. Bioinformatics 22(18): 2315-2316 (2006)
16	EE	Xinan Yang, Stefan Bentink, Stefanie Scheid, Rainer Spang: Similarities of Ordered Gene Lists. J. Bioinformatics and Computational Biology 4(3): 693-708 (2006)
2005
15	EE	Claudio Lottaz, Rainer Spang: stam - a Bioconductor compliant R package for structured analysis of microarray data. BMC Bioinformatics 6: 211 (2005)
14	EE	Stefanie Scheid, Rainer Spang: twilight; a Bioconductor package for estimating the local false discovery rate. Bioinformatics 21(12): 2921-2922 (2005)
13	EE	Florian Markowetz, Jacques Bloch, Rainer Spang: Non-transcriptional pathway features reconstructed from secondary effects of RNA interference. Bioinformatics 21(21): 4026-4032 (2005)
12	EE	Claudio Lottaz, Rainer Spang: Molecular decomposition of complex clinical phenotypes using biologically structured analysis of microarray data. Bioinformatics 21(9): 1971-1978 (2005)
2004
11	EE	Dennis Kostka, Rainer Spang: Finding disease specific alterations in the co-expression of genes. ISMB/ECCB (Supplement of Bioinformatics) 2004: 194-199
10	EE	Stefanie Scheid, Rainer Spang: A Stochastic Downhill Search Algorithm for Estimating the Local False Discovery Rate. IEEE/ACM Trans. Comput. Biology Bioinform. 1(3): 98-108 (2004)
2002
9	EE	Rainer Spang, Carrie Blanchette, Harry Zuzan, Jeffrey R. Marks, Joseph Nevins, Mike West: Prediction and uncertainty in the analysis of gene expression profiles. In Silico Biology 2: 33 (2002)
8		Rainer Spang, Marc Rehmsmeier, Jens Stoye: A Novel Approach to Remote Homology Detection: Jumping Alignments. Journal of Computational Biology 9(5): 747-760 (2002)
2001
7		Rainer Spang, Carrie Blanchette, Harry Zuzan, Jeffrey R. Marks, Joseph Nevins, Mike West: Prediction and uncertainty in the analysis of gene expression profiles. German Conference on Bioinformatics 2001: 102-111
6		Constantin Bannert, Marc Rehmsmeier, Rainer Spang, Jens Stoye: Sequence Database Search Using Jumping Alignments. German Conference on Bioinformatics 2001: 142
5		Rainer Spang, Martin Vingron: Limits of homology detection by pairwise sequence comparison. Bioinformatics 17(4): 338-342 (2001)
2000
4		Rainer Spang, Marc Rehmsmeier, Jens Stoye: Sequence Database Search Using Jumping Alignments. ISMB 2000: 367-375
1999
3		Tobias Müller, Rainer Spang, Martin Vingron: A new method for modeling protein evolution. German Conference on Bioinformatics 1999: 2-8
1998
2		Rainer Spang, Martin Vingron: Statistics of large-scale sequence searching. Bioinformatics 14(3): 279-284 (1998)
1997
1		Rainer Spang, Martin Vingron: Statistics of large scale sequence searching. German Conference on Bioinformatics 1997: 33-35

Coauthor Index

1	Constantin Bannert	[6]
2	Tim Beißbarth	[23]
3	Stefan Bentink	[16] [22]
4	Carrie Blanchette	[7] [9]
5	Jacques Bloch	[13]
6	Holger Fröhlich	[23]
7	Juby Jacob	[22] [23]
8	Marcel Jentsch	[22]
9	Dennis Kostka	[11] [21] [22] [23]
10	Claudio Lottaz	[12] [15] [17] [20]
11	Florian Markowetz	[13] [21] [23]
12	Jeffrey R. Marks	[7] [9]
13	Tobias Müller	[3]
14	Joseph Nevins	[7] [9]
15	Marc Rehmsmeier	[4] [6] [8]
16	Stefanie Scheid	[10] [14] [16] [17] [18] [19]
17	Jens Stoye	[4] [6] [8]
18	Joern Toedling	[20]
19	Achim Tresch	[23]
20	Olga G. Troyanskaya	[21]
21	Martin Vingron	[1] [2] [3] [5]
22	Mike West	[7] [9]
23	Xinan Yang	[16] [17]
24	Harry Zuzan	[7] [9]

Colors in the list of coauthors