| 2008 |
| 8 | EE | Banu Dost,
Tomer Shlomi,
Nitin Gupta,
Eytan Ruppin,
Vineet Bafna,
Roded Sharan:
QNet: A Tool for Querying Protein Interaction Networks.
Journal of Computational Biology 15(7): 913-925 (2008) |
| 2007 |
| 7 | EE | Oved Ourfali,
Tomer Shlomi,
Trey Ideker,
Eytan Ruppin,
Roded Sharan:
SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments.
ISMB/ECCB (Supplement of Bioinformatics) 2007: 359-366 |
| 6 | EE | Banu Dost,
Tomer Shlomi,
Nitin Gupta,
Eytan Ruppin,
Vineet Bafna,
Roded Sharan:
QNet: A Tool for Querying Protein Interaction Networks.
RECOMB 2007: 1-15 |
| 5 | EE | Oleg Rokhlenko,
Tomer Shlomi,
Roded Sharan,
Eytan Ruppin,
Ron Y. Pinter:
Constraint-based functional similarity of metabolic genes: going beyond network topology.
Bioinformatics 23(16): 2139-2146 (2007) |
| 4 | EE | Itay Mayrose,
Osnat Penn,
Elana Erez,
Nimrod D. Rubinstein,
Tomer Shlomi,
Natalia Tarnovitski Freund,
Erez M. Bublil,
Eytan Ruppin,
Roded Sharan,
Jonathan M. Gershoni,
Eric Martz,
Tal Pupko:
Pepitope: epitope mapping from affinity-selected peptides.
Bioinformatics 23(23): 3244-3246 (2007) |
| 2006 |
| 3 | EE | Oleg Rokhlenko,
Tomer Shlomi,
Roded Sharan,
Eytan Ruppin,
Ron Y. Pinter:
Flux-Based vs. Topology-Based Similarity of Metabolic Genes.
WABI 2006: 274-285 |
| 2 | EE | Tomer Shlomi,
Daniel Segal,
Eytan Ruppin,
Roded Sharan:
QPath: a method for querying pathways in a protein-protein interaction network.
BMC Bioinformatics 7: 199 (2006) |
| 2005 |
| 1 | EE | Silpa Suthram,
Tomer Shlomi,
Eytan Ruppin,
Roded Sharan,
Trey Ideker:
Comparison of Protein-Protein Interaction Confidence Assignment Schemes.
Systems Biology and Regulatory Genomics 2005: 39-50 |