| 2008 |
|---|
| 7 | EE | Dongsheng Che,
Guojun Li,
Shane T. Jensen,
Jun S. Liu,
Ying Xu:
PFP: A Computational Framework for Phylogenetic Footprinting in Prokaryotic Genomes.
ISBRA 2008: 110-121 |
| 6 | EE | Alexander Braunstein,
Zhi Wei,
Shane T. Jensen,
Jon D. McAuliffe:
A spatially varying two-sample recombinant coalescent, with applications to HIV escape response.
NIPS 2008: 193-200 |
| 2006 |
|---|
| 5 | EE | Zhi Wei,
Shane T. Jensen:
GAME: detecting cis-regulatory elements using a genetic algorithm.
Bioinformatics 22(13): 1577-1584 (2006) |
| 2005 |
|---|
| 4 | EE | Li-San Wang,
Shane T. Jensen,
Sridhar Hannenhalli:
An Interaction-Dependent Model for Transcription Factor Binding.
Systems Biology and Regulatory Genomics 2005: 225-234 |
| 3 | EE | Dongsheng Che,
Shane T. Jensen,
Liming Cai,
Jun S. Liu:
BEST: Binding-site Estimation Suite of Tools.
Bioinformatics 21(12): 2909-2911 (2005) |
| 2 | EE | Shane T. Jensen,
Lei Shen,
Jun S. Liu:
Combining phylogenetic motif discovery and motif clustering to predict co-regulated genes.
Bioinformatics 21(20): 3832-3839 (2005) |
| 2004 |
|---|
| 1 | EE | Shane T. Jensen,
Jun S. Liu:
BioOptimizer: a Bayesian scoring function approach to motif discovery.
Bioinformatics 20(10): 1557-1564 (2004) |
