Jan Gorodkin

2007
21	EE	Frank Panitz, Henrik Stengaard, Henrik Hornshøj, Jan Gorodkin, Jakob Hedegaard, Susanna Cirera, Bo Thomsen, Lone B. Madsen, Anette Høj, Rikke K. Vingborg, Bujie Zahn, Xuegang Wang, Xuefei Wang, Rasmus Wernersson, Claus B. Jørgensen, Karsten Scheibye-Knudsen, Troels Arvin, Steen Lumholdt, Milena Sawera, Trine Green, Bente J. Nielsen, Jakob Hull Havgaard, Søren Brunak, Merete Fredholm, Christian Bendixen: SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation. ISMB/ECCB (Supplement of Bioinformatics) 2007: 387-391
20	EE	Elfar Torarinsson, Jakob Hull Havgaard, Jan Gorodkin: Multiple structural alignment and clustering of RNA sequences. Bioinformatics 23(8): 926-932 (2007)
2006
19	EE	Jan Gorodkin, Jakob Hull Havgaard, Milena Ensterö, Milena Sawera, P. Jensen, M. Öhman, Merete Fredholm: MicroRNA sequence motifs reveal asymmetry between the stem arms. Computational Biology and Chemistry 30(4): 249-254 (2006)
18	EE	Ebbe Sloth Andersen, Magnus Alm Rosenblad, Niels Larsen, Jesper Cairo Westergaard, Jody Burks, Iwona K. Wower, Jacek Wower, Jan Gorodkin, Tore Samuelsson, Christian Zwieb: The tmRDB and SRPDB resources. Nucleic Acids Research 34(Database-Issue): 163-168 (2006)
2005
17	EE	Jakob Hull Havgaard, Rune B. Lyngsø, Gary D. Stormo, Jan Gorodkin: Pairwise local structural alignment of RNA sequences with sequence similarity less than 40%. Bioinformatics 21(9): 1815-1824 (2005)
16	EE	Jakob Hull Havgaard, Rune B. Lyngsø, Jan Gorodkin: The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search. Nucleic Acids Research 33(Web-Server-Issue): 650-653 (2005)
2004
15	EE	Bjarne Knudsen, Ebbe Sloth Andersen, Christian K. Damgaard, J. Kjems, Jan Gorodkin: Evolutionary rate variation and RNA secondary structure prediction. Computational Biology and Chemistry 28(3): 219-226 (2004)
14	EE	Jan Gorodkin: Comparing two K-category assignments by a K-category correlation coefficient. Computational Biology and Chemistry 28(5-6): 367-374 (2004)
2003
13		Magnus Alm Rosenblad, Jan Gorodkin, Bjarne Knudsen, Christian Zwieb, Tore Samuelsson: SRPDB: Signal Recognition Particle Database. Nucleic Acids Research 31(1): 363-364 (2003)
12		Christian Zwieb, Jan Gorodkin, Bjarne Knudsen, Jody Burks, Jacek Wower: tmRDB (tmRNA database). Nucleic Acids Research 31(1): 446-447 (2003)
2001
11		Jan Gorodkin, Christian Zwieb, Bjarne Knudsen: Semi-automated update and cleanup of structural RNA alignment databases. Bioinformatics 17(7): 642-645 (2001)
10	EE	Jan Gorodkin, Bodil Søgaard, Hanne Bay, Hans Doll, Per Kølster, Søren Brunak: Recognition of Environmental and Genetic Effects on Barley Phenolic Fingerprints by Neural Networks. Computers & Chemistry 25(3): 301-307 (2001)
9		Jan Gorodkin, Bjarne Knudsen, Christian Zwieb, Tore Samuelsson: SRPDB (Signal Recognition Particle Database). Nucleic Acids Research 29(1): 169-170 (2001)
8		Bjarne Knudsen, Jacek Wower, Christian Zwieb, Jan Gorodkin: tmRDB (tmRNA database). Nucleic Acids Research 29(1): 171-172 (2001)
1999
7		Jan Gorodkin, Ole Lund, Claus A. F. Andersen, Søren Brunak: Using Sequence Motifs for Enhanced Neural Network Prediction of Protein Distance Constraints. ISMB 1999: 95-105
6		Jan Gorodkin, Hans Henrik Stærfeldt, Ole Lund, Søren Brunak: MatrixPlot: visualizing sequence constraints. Bioinformatics 15(9): 769-770 (1999)
1997
5		Jan Gorodkin, Laurie J. Heyer, Gary D. Stormo: Finding Common Sequence and Structure Motifs in a Set of RNA Sequences. ISMB 1997: 120-123
4		Jan Gorodkin, Laurie J. Heyer, Søren Brunak, Gary D. Stormo: Displaying the information contents of structural RNA alignments: the structure logos. Computer Applications in the Biosciences 13(6): 583-586 (1997)
3	EE	Jan Gorodkin: Orbits of Boolean Functions. Discrete Applied Mathematics 75(3): 269-275 (1997)
2	EE	Jan Gorodkin, Lars Kai Hansen, Benny Lautrup, Sara A. Solla: Universal Distribution of Saliencies for Pruning in Layered Neural Networks. Int. J. Neural Syst. 8(5-6): 489-498 (1997)
1993
1	EE	Jan Gorodkin, Lars Kai Hansen, Anders Krogh, Claus Svarer, Ole Winther: A Quantitative Study Of Pruning By Optimal Brain Damage. Int. J. Neural Syst. 4(2): 159-169 (1993)

Coauthor Index

1	Claus A. F. Andersen	[7]
2	Ebbe Sloth Andersen	[15] [18]
3	Troels Arvin	[21]
4	Hanne Bay	[10]
5	Christian Bendixen	[21]
6	Søren Brunak	[4] [6] [7] [10] [21]
7	Jody Burks	[12] [18]
8	Susanna Cirera	[21]
9	Christian K. Damgaard	[15]
10	Hans Doll	[10]
11	Milena Ensterö	[19]
12	Merete Fredholm	[19] [21]
13	Trine Green	[21]
14	Lars Kai Hansen	[1] [2]
15	Jakob Hull Havgaard	[16] [17] [19] [20] [21]
16	Jakob Hedegaard	[21]
17	Laurie J. Heyer	[4] [5]
18	Anette Høj	[21]
19	Henrik Hornshøj	[21]
20	P. Jensen	[19]
21	Claus B. Jørgensen	[21]
22	J. Kjems	[15]
23	Bjarne Knudsen	[8] [9] [11] [12] [13] [15]
24	Per Kølster	[10]
25	Anders Krogh	[1]
26	Niels Larsen	[18]
27	Benny Lautrup	[2]
28	Steen Lumholdt	[21]
29	Ole Lund	[6] [7]
30	Rune B. Lyngsø	[16] [17]
31	Lone B. Madsen	[21]
32	Bente J. Nielsen	[21]
33	M. Öhman	[19]
34	Frank Panitz	[21]
35	Magnus Alm Rosenblad	[13] [18]
36	Tore Samuelsson	[9] [13] [18]
37	Milena Sawera	[19] [21]
38	Karsten Scheibye-Knudsen	[21]
39	Bodil Søgaard	[10]
40	Sara A. Solla	[2]
41	Hans Henrik Stærfeldt	[6]
42	Henrik Stengaard	[21]
43	Gary D. Stormo	[4] [5] [17]
44	Claus Svarer	[1]
45	Bo Thomsen	[21]
46	Elfar Torarinsson	[20]
47	Rikke K. Vingborg	[21]
48	Xuefei Wang	[21]
49	Xuegang Wang	[21]
50	Rasmus Wernersson	[21]
51	Jesper Cairo Westergaard	[18]
52	Ole Winther	[1]
53	Iwona K. Wower	[18]
54	Jacek Wower	[8] [12] [18]
55	Bujie Zahn	[21]
56	Christian Zwieb	[8] [9] [11] [12] [13] [18]

Colors in the list of coauthors