dblp.uni-trier.dewww.uni-trier.de

Jan Gorodkin

List of publications from the DBLP Bibliography Server - FAQ
Coauthor Index - Ask others: ACM DL/Guide - CiteSeer - CSB - Google - MSN - Yahoo

2007
21EEFrank Panitz, Henrik Stengaard, Henrik Hornshøj, Jan Gorodkin, Jakob Hedegaard, Susanna Cirera, Bo Thomsen, Lone B. Madsen, Anette Høj, Rikke K. Vingborg, Bujie Zahn, Xuegang Wang, Xuefei Wang, Rasmus Wernersson, Claus B. Jørgensen, Karsten Scheibye-Knudsen, Troels Arvin, Steen Lumholdt, Milena Sawera, Trine Green, Bente J. Nielsen, Jakob Hull Havgaard, Søren Brunak, Merete Fredholm, Christian Bendixen: SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation. ISMB/ECCB (Supplement of Bioinformatics) 2007: 387-391
20EEElfar Torarinsson, Jakob Hull Havgaard, Jan Gorodkin: Multiple structural alignment and clustering of RNA sequences. Bioinformatics 23(8): 926-932 (2007)
2006
19EEJan Gorodkin, Jakob Hull Havgaard, Milena Ensterö, Milena Sawera, P. Jensen, M. Öhman, Merete Fredholm: MicroRNA sequence motifs reveal asymmetry between the stem arms. Computational Biology and Chemistry 30(4): 249-254 (2006)
18EEEbbe Sloth Andersen, Magnus Alm Rosenblad, Niels Larsen, Jesper Cairo Westergaard, Jody Burks, Iwona K. Wower, Jacek Wower, Jan Gorodkin, Tore Samuelsson, Christian Zwieb: The tmRDB and SRPDB resources. Nucleic Acids Research 34(Database-Issue): 163-168 (2006)
2005
17EEJakob Hull Havgaard, Rune B. Lyngsø, Gary D. Stormo, Jan Gorodkin: Pairwise local structural alignment of RNA sequences with sequence similarity less than 40%. Bioinformatics 21(9): 1815-1824 (2005)
16EEJakob Hull Havgaard, Rune B. Lyngsø, Jan Gorodkin: The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search. Nucleic Acids Research 33(Web-Server-Issue): 650-653 (2005)
2004
15EEBjarne Knudsen, Ebbe Sloth Andersen, Christian K. Damgaard, J. Kjems, Jan Gorodkin: Evolutionary rate variation and RNA secondary structure prediction. Computational Biology and Chemistry 28(3): 219-226 (2004)
14EEJan Gorodkin: Comparing two K-category assignments by a K-category correlation coefficient. Computational Biology and Chemistry 28(5-6): 367-374 (2004)
2003
13 Magnus Alm Rosenblad, Jan Gorodkin, Bjarne Knudsen, Christian Zwieb, Tore Samuelsson: SRPDB: Signal Recognition Particle Database. Nucleic Acids Research 31(1): 363-364 (2003)
12 Christian Zwieb, Jan Gorodkin, Bjarne Knudsen, Jody Burks, Jacek Wower: tmRDB (tmRNA database). Nucleic Acids Research 31(1): 446-447 (2003)
2001
11 Jan Gorodkin, Christian Zwieb, Bjarne Knudsen: Semi-automated update and cleanup of structural RNA alignment databases. Bioinformatics 17(7): 642-645 (2001)
10EEJan Gorodkin, Bodil Søgaard, Hanne Bay, Hans Doll, Per Kølster, Søren Brunak: Recognition of Environmental and Genetic Effects on Barley Phenolic Fingerprints by Neural Networks. Computers & Chemistry 25(3): 301-307 (2001)
9 Jan Gorodkin, Bjarne Knudsen, Christian Zwieb, Tore Samuelsson: SRPDB (Signal Recognition Particle Database). Nucleic Acids Research 29(1): 169-170 (2001)
8 Bjarne Knudsen, Jacek Wower, Christian Zwieb, Jan Gorodkin: tmRDB (tmRNA database). Nucleic Acids Research 29(1): 171-172 (2001)
1999
7 Jan Gorodkin, Ole Lund, Claus A. F. Andersen, Søren Brunak: Using Sequence Motifs for Enhanced Neural Network Prediction of Protein Distance Constraints. ISMB 1999: 95-105
6 Jan Gorodkin, Hans Henrik Stærfeldt, Ole Lund, Søren Brunak: MatrixPlot: visualizing sequence constraints. Bioinformatics 15(9): 769-770 (1999)
1997
5 Jan Gorodkin, Laurie J. Heyer, Gary D. Stormo: Finding Common Sequence and Structure Motifs in a Set of RNA Sequences. ISMB 1997: 120-123
4 Jan Gorodkin, Laurie J. Heyer, Søren Brunak, Gary D. Stormo: Displaying the information contents of structural RNA alignments: the structure logos. Computer Applications in the Biosciences 13(6): 583-586 (1997)
3EEJan Gorodkin: Orbits of Boolean Functions. Discrete Applied Mathematics 75(3): 269-275 (1997)
2EEJan Gorodkin, Lars Kai Hansen, Benny Lautrup, Sara A. Solla: Universal Distribution of Saliencies for Pruning in Layered Neural Networks. Int. J. Neural Syst. 8(5-6): 489-498 (1997)
1993
1EEJan Gorodkin, Lars Kai Hansen, Anders Krogh, Claus Svarer, Ole Winther: A Quantitative Study Of Pruning By Optimal Brain Damage. Int. J. Neural Syst. 4(2): 159-169 (1993)

Coauthor Index

1Claus A. F. Andersen [7]
2Ebbe Sloth Andersen [15] [18]
3Troels Arvin [21]
4Hanne Bay [10]
5Christian Bendixen [21]
6Søren Brunak [4] [6] [7] [10] [21]
7Jody Burks [12] [18]
8Susanna Cirera [21]
9Christian K. Damgaard [15]
10Hans Doll [10]
11Milena Ensterö [19]
12Merete Fredholm [19] [21]
13Trine Green [21]
14Lars Kai Hansen [1] [2]
15Jakob Hull Havgaard [16] [17] [19] [20] [21]
16Jakob Hedegaard [21]
17Laurie J. Heyer [4] [5]
18Anette Høj [21]
19Henrik Hornshøj [21]
20P. Jensen [19]
21Claus B. Jørgensen [21]
22J. Kjems [15]
23Bjarne Knudsen [8] [9] [11] [12] [13] [15]
24Per Kølster [10]
25Anders Krogh [1]
26Niels Larsen [18]
27Benny Lautrup [2]
28Steen Lumholdt [21]
29Ole Lund [6] [7]
30Rune B. Lyngsø [16] [17]
31Lone B. Madsen [21]
32Bente J. Nielsen [21]
33M. Öhman [19]
34Frank Panitz [21]
35Magnus Alm Rosenblad [13] [18]
36Tore Samuelsson [9] [13] [18]
37Milena Sawera [19] [21]
38Karsten Scheibye-Knudsen [21]
39Bodil Søgaard [10]
40Sara A. Solla [2]
41Hans Henrik Stærfeldt [6]
42Henrik Stengaard [21]
43Gary D. Stormo [4] [5] [17]
44Claus Svarer [1]
45Bo Thomsen [21]
46Elfar Torarinsson [20]
47Rikke K. Vingborg [21]
48Xuefei Wang [21]
49Xuegang Wang [21]
50Rasmus Wernersson [21]
51Jesper Cairo Westergaard [18]
52Ole Winther [1]
53Iwona K. Wower [18]
54Jacek Wower [8] [12] [18]
55Bujie Zahn [21]
56Christian Zwieb [8] [9] [11] [12] [13] [18]

Colors in the list of coauthors

Copyright © Sun May 17 03:24:02 2009 by Michael Ley (ley@uni-trier.de)