| 2004 |
| 9 | EE | Bjarne Knudsen,
Ebbe Sloth Andersen,
Christian K. Damgaard,
J. Kjems,
Jan Gorodkin:
Evolutionary rate variation and RNA secondary structure prediction.
Computational Biology and Chemistry 28(3): 219-226 (2004) |
| 2003 |
| 8 | EE | Bjarne Knudsen:
Optimal Multiple Parsimony Alignment with Affine Gap Cost Using a Phylogenetic Tree.
WABI 2003: 433-446 |
| 7 | | Magnus Alm Rosenblad,
Jan Gorodkin,
Bjarne Knudsen,
Christian Zwieb,
Tore Samuelsson:
SRPDB: Signal Recognition Particle Database.
Nucleic Acids Research 31(1): 363-364 (2003) |
| 6 | | Christian Zwieb,
Jan Gorodkin,
Bjarne Knudsen,
Jody Burks,
Jacek Wower:
tmRDB (tmRNA database).
Nucleic Acids Research 31(1): 446-447 (2003) |
| 5 | | Bjarne Knudsen,
Jotun Hein:
Pfold: RNA secondary structure prediction using stochastic context-free grammars.
Nucleic Acids Research 31(13): 3423-3428 (2003) |
| 2001 |
| 4 | | Jan Gorodkin,
Christian Zwieb,
Bjarne Knudsen:
Semi-automated update and cleanup of structural RNA alignment databases.
Bioinformatics 17(7): 642-645 (2001) |
| 3 | | Jan Gorodkin,
Bjarne Knudsen,
Christian Zwieb,
Tore Samuelsson:
SRPDB (Signal Recognition Particle Database).
Nucleic Acids Research 29(1): 169-170 (2001) |
| 2 | | Bjarne Knudsen,
Jacek Wower,
Christian Zwieb,
Jan Gorodkin:
tmRDB (tmRNA database).
Nucleic Acids Research 29(1): 171-172 (2001) |
| 1999 |
| 1 | | Bjarne Knudsen,
Jotun Hein:
RNA secondary structure prediction using stochastic context-free grammars and evolutionary history.
Bioinformatics 15(6): 446-454 (1999) |