2007 |
8 | EE | Fabrizio Ferrè,
Yann Ponty,
W. A. Lorenz,
Peter Clote:
DIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities.
Nucleic Acids Research 35(Web-Server-Issue): 659-668 (2007) |
2006 |
7 | EE | Fabrizio Ferrè,
Peter Clote:
DiANNA 1.1: an extension of the DiANNA web server for ternary cysteine classification.
Nucleic Acids Research 34(Web-Server-Issue): 182-185 (2006) |
6 | EE | Fabrizio Ferrè,
Peter Clote:
BTW: a web server for Boltzmann time warping of gene expression time series.
Nucleic Acids Research 34(Web-Server-Issue): 482-485 (2006) |
2005 |
5 | EE | Fabrizio Ferrè,
Gabriele Ausiello,
Andreas Zanzoni,
Manuela Helmer-Citterich:
Functional annotation by identification of local surface similarities: a novel tool for structural genomics.
BMC Bioinformatics 6: 194 (2005) |
4 | EE | Fabrizio Ferrè,
Peter Clote:
Disulfide connectivity prediction using secondary structure information and diresidue frequencies.
Bioinformatics 21(10): 2336-2346 (2005) |
3 | EE | Fabrizio Ferrè,
Peter Clote:
DiANNA: a web server for disulfide connectivity prediction.
Nucleic Acids Research 33(Web-Server-Issue): 230-232 (2005) |
2004 |
2 | | Fabrizio Ferrè,
Gabriele Ausiello,
Andreas Zanzoni,
Manuela Helmer-Citterich:
SURFACE: a database of protein surface regions for functional annotation.
Nucleic Acids Research 32(Database-Issue): 240-244 (2004) |
2003 |
1 | | Pål Puntervoll,
Rune Linding,
Christine Gemünd,
Sophie Chabanis-Davidson,
Morten Mattingsdal,
Scott Cameron,
David M. A. Martin,
Gabriele Ausiello,
Barbara Brannetti,
Anna Costantini,
Fabrizio Ferrè,
Vincenza Maselli,
Allegra Via,
Gianni Cesareni,
Francesca Diella,
Giulio Superti-Furga,
Lucjan Stanislaw Wyrwicz,
Chenna Ramu,
Caroline McGuigan,
Rambabu Gudavalli,
Ivica Letunic,
Peer Bork,
Leszek Rychlewski,
Bernhard Küster,
Manuela Helmer-Citterich,
William N. Hunter,
Rein Aasland,
Toby J. Gibson:
ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins.
Nucleic Acids Research 31(13): 3625-3630 (2003) |